Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000551g0100 Nicotiana tabacum HOM05D007392 ORTHO05D009181 6.7e-63 243.8 121 100.0
Nitab4.5_0006195g0060 Nicotiana tabacum HOM05D007392 ORTHO05D009181 3.6e-56 221.5 114 95.6
Peaxi162Scf00705g00062 Petunia axillaris HOM05D007392 ORTHO05D009181 2.0e-35 152.5 124 67.7
PGSC0003DMG402032165 Solanum tuberosum HOM05D007392 ORTHO05D009181 1.4e-31 139.8 113 68.1
CAN.G1834.12 Capsicum annuum HOM05D007392 ORTHO05D009181 3.0e-31 138.7 113 67.3
Solyc01g005530.3 Solanum lycopersicum HOM05D007392 ORTHO05D009181 6.8e-31 137.5 116 69.0
Actinidia16241 Actinidia chinensis HOM05D007392 ORTHO05D009181 8.9e-31 137.1 123 64.2
Sopen01g001550 Solanum pennellii HOM05D007392 ORTHO05D009181 8.9e-31 137.1 116 69.0
Dinv13477 Davidia involucrata HOM05D007392 ORTHO05D009181 1.2e-30 136.7 123 65.9
Cc01_g00150 Coffea canephora HOM05D007392 ORTHO05D009181 2.0e-30 136.0 124 62.9
Oeu004754.1 Olea europaea HOM05D007392 ORTHO05D009181 1.3e-29 133.3 121 63.6
MSTRG.20935 Avicennia marina HOM05D000287 ORTHO05D000319 5.9e-27 124.4 117 58.1
Rhsim13G0233100 Rhododendron simsii HOM05D007392 ORTHO05D009181 1.7e-26 122.9 116 61.2
GSVIVG01025476001 Vitis vinifera HOM05D007392 ORTHO05D009181 5.0e-26 121.3 115 60.0
Actinidia00905 Actinidia chinensis HOM05D007392 ORTHO05D009181 1.9e-25 119.4 121 62.0
SalBow3G3897 Salvia bowleyana HOM05D007392 ORTHO05D009181 2.5e-25 119.0 116 55.2
Oeu059652.1 Olea europaea HOM05D007392 ORTHO05D009181 7.3e-25 117.5 114 54.4
DCAR_032194 Daucus carota HOM05D007392 ORTHO05D009181 1.2e-24 116.7 128 51.6
Lsat_1_v5_gn_6_55560 Lactuca sativa HOM05D007392 ORTHO05D009181 6.2e-24 114.4 122 55.7
Potri.001G003300 Populus trichocarpa HOM05D007392 ORTHO05D009181 5.8e-22 107.8 117 54.7
SGA_v2.0_scaffold6G03356 Striga asiatica HOM05D007392 ORTHO05D009181 9.8e-22 107.1 121 50.4
Ciclev10017000m.g Citrus clementina HOM05D007392 ORTHO05D009181 1.7e-21 106.3 133 51.1
TWI34G1824 Tripterygium wilfordii HOM05D007392 ORTHO05D009181 2.2e-21 105.9 119 52.9
Cfa009557 Carpinus fangiana HOM05D007392 ORTHO05D009181 4.9e-21 104.8 116 59.5
Potri.003G221800 Populus trichocarpa HOM05D007392 ORTHO05D009181 1.1e-20 103.6 119 54.6
QL01p003594 Quercus lobata HOM05D007392 ORTHO05D009181 1.1e-20 103.6 117 56.4
FvH4_3g45780 Fragaria vesca HOM05D007392 ORTHO05D009181 2.4e-20 102.4 120 51.7
vmacro04261 Vaccinium macrocarpon HOM05D007392 ORTHO05D009181 2.4e-20 102.4 103 59.2
Sabra03G0165000 Salix brachista HOM05D007392 ORTHO05D009181 5.4e-20 101.3 117 53.0
Manes.15G109800 Manihot esculenta HOM05D007392 ORTHO05D009181 7.0e-20 100.9 129 49.6
CiPaw.13G177600 Carya illinoinensis HOM05D007392 ORTHO05D009181 1.2e-19 100.1 113 56.6
Eucgr.J01763 Eucalyptus grandis HOM05D007392 ORTHO05D009181 1.2e-19 100.1 117 50.4
ECA233G2404 Erigeron canadensis HOM05D007392 ORTHO05D009181 2.7e-19 99.0 123 52.8
FAN11G3804 Fragaria x ananassa HOM05D007392 ORTHO05D009181 3.5e-19 98.6 120 51.7
RcHm_v2.0_Chr5g0083851 Rosa chinensis HOM05D007392 ORTHO05D009181 3.5e-19 98.6 120 51.7
Aqoxy2G00525 Aquilegia oxysepala HOM05D007392 ORTHO05D009181 6.0e-19 97.8 112 51.8
Migut.D02571 Erythranthe guttata HOM05D007392 ORTHO05D009181 7.8e-19 97.4 116 52.6
Prupe.6G002800 Prunus persica HOM05D007392 ORTHO05D009181 7.8e-19 97.4 117 57.3
Migut.D02593 Erythranthe guttata HOM05D007392 ORTHO05D009181 1.0e-18 97.1 117 49.6
FAN25G2102 Fragaria x ananassa HOM05D007392 ORTHO05D009181 1.7e-18 96.3 124 49.2
EL10Ac4g10390 Beta vulgaris HOM05D007392 ORTHO05D009181 2.3e-18 95.9 139 44.6
TAR623G1707 Trochodendron aralioides HOM05D007392 ORTHO05D009181 3.0e-18 95.5 115 53.9
Nn2g15869 Nelumbo nucifera HOM05D007392 ORTHO05D009181 3.9e-18 95.1 118 50.0
PSO384G3152 Papaver somniferum HOM05D007392 ORTHO05D009181 3.9e-18 95.1 117 49.6
MD03G1003200 Malus domestica HOM05D007392 ORTHO05D009181 6.6e-18 94.4 130 44.6
vmacro23199 Vaccinium macrocarpon HOM05D007392 ORTHO05D009181 1.9e-17 92.8 91 63.7
FAN16G0802 Fragaria x ananassa HOM05D007392 ORTHO05D009181 4.3e-17 91.7 122 48.4
PSO339G3225 Papaver somniferum HOM05D007392 ORTHO05D009181 4.3e-17 91.7 118 47.5
Sabra01G0002400 Salix brachista HOM05D007392 ORTHO05D009181 4.3e-17 91.7 125 48.0
SGA_v2.0_scaffold6G03313 Striga asiatica HOM05D007392 ORTHO05D009181 9.5e-17 90.5 120 50.0
Sc09g0000040 Simmondsia chinensis HOM05D007392 ORTHO05D009181 1.2e-16 90.1 146 43.2
THA.LOC104810320 Tarenaya hassleriana HOM05D007392 ORTHO05D009181 3.1e-15 85.5 128 46.1
Nn7g35849 Nelumbo nucifera HOM05D007392 ORTHO05D009181 1.5e-14 83.2 117 47.0
CANSAT11G0973 Cannabis sativa HOM05D007392 ORTHO05D009181 7.5e-14 80.9 118 44.1
MD11G1003000 Malus domestica HOM05D007392 ORTHO05D009181 1.3e-13 80.1 126 40.5
HPP92_024836 Vanilla planifolia HOM05D007392 ORTHO05D009181 8.3e-13 77.4 110 46.4
HPP92_026624 Vanilla planifolia HOM05D007392 ORTHO05D009181 1.1e-12 77.0 110 46.4
Cpa.g.sc119.37 Carica papaya HOM05D007392 ORTHO05D009181 1.4e-12 76.6 109 50.5
C01p51590 Brassica napus HOM05D007392 ORTHO05D009181 1.9e-12 76.3 135 41.5
BolC1t05102H Brassica oleracea HOM05D007392 ORTHO05D009181 1.9e-12 76.3 135 41.5
Carub.0003s1294 Capsella rubella HOM05D007392 ORTHO05D009181 1.9e-12 76.3 142 42.3
BcaB04g18766 Brassica carinata HOM05D007392 ORTHO05D009181 3.2e-12 75.5 134 40.3
A05p36050 Brassica napus HOM05D007392 ORTHO05D009181 4.1e-12 75.1 142 39.4
PGR119G0135 Punica granatum HOM05D007392 ORTHO05D009181 9.2e-12 73.9 120 39.2
AT3G13480 Arabidopsis thaliana HOM05D007392 ORTHO05D009181 2.7e-11 72.4 144 38.9
Sp3g11690 Schrenkiella parvula HOM05D007392 ORTHO05D009181 2.7e-11 72.4 148 37.2
CsaV3_1G041630 Cucumis sativus L. HOM05D007392 ORTHO05D009181 4.6e-11 71.6 122 44.3
BcaC05g29176 Brassica carinata HOM05D007392 ORTHO05D009181 6.0e-11 71.2 148 37.8
CARHR088140 Cardamine hirsuta HOM05D007392 ORTHO05D009181 7.8e-11 70.9 139 39.6
C03p46400 Brassica napus HOM05D007392 ORTHO05D009181 1.3e-10 70.1 147 38.8
Thhalv10021633m.g Eutrema salsugineum HOM05D007392 ORTHO05D009181 1.3e-10 70.1 147 37.4
C03p46430 Brassica napus HOM05D007392 ORTHO05D009181 8.6e-10 67.4 111 42.3
A01p40100 Brassica napus HOM05D007392 ORTHO05D009181 1.5e-09 66.6 132 38.6
BraA01t04052Z Brassica rapa HOM05D007392 ORTHO05D009181 1.5e-09 66.6 132 38.6
MELO3C015574.2 Cucumis melo HOM05D007392 ORTHO05D009181 1.5e-09 66.6 120 41.7
AL3G25390 Arabidopsis lyrata HOM05D007392 ORTHO05D009181 3.3e-09 65.5 141 36.9
HPP92_015638 Vanilla planifolia HOM05D007392 ORTHO05D009181 7.3e-09 64.3 107 38.3
C05p54400 Brassica napus HOM05D007392 ORTHO05D009181 9.5e-09 63.9 140 37.1
Sed0020032 Sechium edule HOM05D007392 ORTHO05D009181 2.1e-08 62.8 117 37.6
BraA03t12977Z Brassica rapa HOM05D007392 ORTHO05D009181 2.8e-08 62.4 147 36.7
Aa31LG8G680 Aethionema arabicum HOM05D007392 ORTHO05D009181 3.6e-08 62.0 126 34.1
Migut.N00543 Erythranthe guttata HOM05D007392 ORTHO05D009181 3.6e-08 62.0 106 38.7
ClCG03G014560 Citrullus lanatus HOM05D007392 ORTHO05D009181 4.7e-08 61.6 116 42.2
BcaC01g03991 Brassica carinata HOM05D007392 ORTHO05D009181 1.8e-07 59.7 122 36.9


User provided reference genes

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