Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000540g0250 Nicotiana tabacum HOM05D006034 ORTHO05D007535 4.3e-168 594.7 336 100.0
Nitab4.5_0011903g0020 Nicotiana tabacum HOM05D006034 ORTHO05D007535 2.8e-106 389.4 280 85.0
PGSC0003DMG400000341 Solanum tuberosum HOM05D006034 ORTHO05D007535 3.4e-96 355.9 340 67.6
CAN.G1241.18 Capsicum annuum HOM05D006034 ORTHO05D007535 2.4e-94 349.7 340 68.2
Sopen12g003720 Solanum pennellii HOM05D006034 ORTHO05D007535 9.2e-94 347.8 340 67.6
vmacro17221 Vaccinium macrocarpon HOM05D006034 ORTHO05D007535 5.1e-84 315.5 274 67.2
Cc06_g11190 Coffea canephora HOM05D006034 ORTHO05D007535 3.7e-79 299.3 341 58.1
Migut.J00593 Erythranthe guttata HOM05D006034 ORTHO05D007535 7.8e-77 291.6 340 49.4
TAR636G0081 Trochodendron aralioides HOM05D006034 ORTHO05D007535 1.3e-76 290.8 324 56.8
ClCG03G015740 Citrullus lanatus HOM05D000085 ORTHO05D001756 2.3e-76 290.0 274 64.6
HanXRQChr12g0354751 Helianthus annuus HOM05D006034 ORTHO05D007535 3.0e-76 289.7 295 52.2
Lsat_1_v5_gn_5_145641 Lactuca sativa HOM05D006034 ORTHO05D007535 3.3e-75 286.2 338 56.2
ECA234G0840 Erigeron canadensis HOM05D006034 ORTHO05D001756 1.6e-74 283.9 259 56.4
Haze_25892 Corylus avellana HOM05D006034 ORTHO05D007535 2.1e-74 283.5 276 65.9
Gohir.D06G070100 Gossypium hirsutum HOM05D006034 ORTHO05D007535 2.1e-74 283.5 337 51.3
Gorai.010G081700 Gossypium raimondii HOM05D006034 ORTHO05D007535 3.6e-74 282.7 337 52.5
Ciclev10008848m.g Citrus clementina HOM05D006034 ORTHO05D007535 7.6e-72 275.0 334 50.0
COL.COLO4_18220 Corchorus olitorius HOM05D006034 ORTHO05D001756 1.7e-71 273.9 333 53.8
Gohir.A06G071400 Gossypium hirsutum HOM05D006034 ORTHO05D007535 2.9e-71 273.1 337 48.7
Lj7C673T11 Lonicera japonica HOM05D006034 ORTHO05D007535 3.5e-69 266.2 259 55.6
SGA_v2.0_scaffold62G21594 Striga asiatica HOM05D006034 ORTHO05D007535 7.8e-69 265.0 334 53.0
CiPaw.03G217800 Carya illinoinensis HOM05D006034 ORTHO05D007535 1.1e-67 261.2 339 49.3
Solyc12g008790.3 Solanum lycopersicum HOM05D006034 ORTHO05D007535 1.1e-67 261.2 213 81.7
Potri.006G150200 Populus trichocarpa HOM05D006034 ORTHO05D007535 2.5e-67 260.0 336 44.6
PSO210G1139 Papaver somniferum HOM05D006034 ORTHO05D007535 4.3e-67 259.2 337 52.2
PSO210G3620 Papaver somniferum HOM05D006034 ORTHO05D007535 2.1e-66 256.9 338 50.3
FvH4_1g22100 Fragaria vesca HOM05D006034 ORTHO05D007535 3.6e-66 256.1 258 51.2
FAN19G2130 Fragaria x ananassa HOM05D006034 ORTHO05D007535 3.6e-66 256.1 258 51.2
QL02p062983 Quercus lobata HOM05D006034 ORTHO05D007535 6.2e-66 255.4 258 54.3
Aqoxy7G04066 Aquilegia oxysepala HOM05D006034 ORTHO05D007535 1.1e-65 254.6 258 51.9
MELO3C015455.2 Cucumis melo HOM05D006034 ORTHO05D007535 1.4e-65 254.2 295 53.9
Manes.03G032201 Manihot esculenta HOM05D006034 ORTHO05D007535 5.3e-65 252.3 337 52.8
GSVIVG01015225001 Vitis vinifera HOM05D006034 ORTHO05D007535 6.9e-65 251.9 326 52.8
Lj2g0022455 Lotus japonicus HOM05D006034 ORTHO05D007535 1.2e-64 251.1 327 47.7
RcHm_v2.0_Chr2g0093061 Rosa chinensis HOM05D006034 ORTHO05D007535 2.0e-64 250.4 291 55.7
CDE05G1399 Ceratophyllum demersum HOM05D006034 ORTHO05D007535 3.4e-64 249.6 231 64.5
FAN26G1667 Fragaria x ananassa HOM05D006034 ORTHO05D007535 1.7e-63 247.3 253 51.8
Oeu021834.2 Olea europaea HOM05D006034 ORTHO05D007535 1.4e-62 244.2 336 52.7
Prupe.7G212400 Prunus persica HOM05D006034 ORTHO05D007535 1.4e-62 244.2 255 52.2
MD15G1204600 Malus domestica HOM05D006034 ORTHO05D007535 1.9e-62 243.8 249 50.6
Eucgr.C00910 Eucalyptus grandis HOM05D006034 ORTHO05D007535 4.2e-62 242.7 338 47.0
SalBow6G0258 Salvia bowleyana HOM05D006034 ORTHO05D007535 1.2e-61 241.1 206 59.7
HPP92_023401 Vanilla planifolia HOM05D006034 ORTHO05D007535 1.6e-61 240.7 303 50.8
MD02G1076200 Malus domestica HOM05D006034 ORTHO05D007535 1.7e-60 237.3 253 49.0
Actinidia25263 Actinidia chinensis HOM05D006034 ORTHO05D007535 7.3e-59 231.9 313 53.4
ATR0705G153 Amborella trichopoda HOM05D006034 ORTHO05D007535 3.6e-58 229.6 301 46.2
THA.LOC104807985 Tarenaya hassleriana HOM05D006034 ORTHO05D007535 6.2e-58 228.8 360 43.9
Mapoly0014s0071 Marchantia polymorpha HOM05D006034 ORTHO05D007535 8.1e-58 228.4 258 45.7
SEGI_04673 Sequoiadendron giganteum HOM05D006034 ORTHO05D007535 1.1e-57 228.0 261 46.0
Peaxi162Scf00498g00128 Petunia axillaris HOM05D006034 ORTHO05D007535 4.0e-57 226.1 131 87.0
AUR62031326 Chenopodium quinoa HOM05D006034 ORTHO05D007535 2.6e-56 223.4 232 48.7
Hma1.2p1_0800F.1_g219990 Hydrangea macrophylla HOM05D006034 ORTHO05D007535 3.4e-56 223.0 132 81.1
FAN23G1099 Fragaria x ananassa HOM05D006034 ORTHO05D007535 5.8e-56 222.2 253 48.2
Sabra06G0118900 Salix brachista HOM05D006034 ORTHO05D007535 5.8e-56 222.2 342 40.1
Lalb_Chr24g0393801 Lupinus albus HOM05D006034 ORTHO05D007535 7.6e-56 221.9 233 49.4
TWI32G0461 Tripterygium wilfordii HOM05D006034 ORTHO05D007535 2.9e-55 219.9 196 68.9
Os01g0722100 Oryza sativa ssp. japonica HOM05D006034 ORTHO05D007535 6.4e-55 218.8 302 49.0
arahy.Tifrunner.gnm1.ann1.JYMB6X Arachis hypogaea HOM05D006034 ORTHO05D007535 8.4e-55 218.4 236 51.3
Hma1.2p1_0800F.1_g219980 Hydrangea macrophylla HOM05D006034 ORTHO05D007535 1.1e-54 218.0 166 79.5
Glyma.07G128800 Glycine max HOM05D006034 ORTHO05D007535 4.2e-54 216.1 233 49.4
arahy.Tifrunner.gnm1.ann1.VJWZ4U Arachis hypogaea HOM05D006034 ORTHO05D007535 1.2e-53 214.5 236 49.6
CsaV3_1G040270 Cucumis sativus L. HOM05D006034 ORTHO05D007535 1.6e-53 214.2 277 52.0
TPR.G35498 Trifolium pratense HOM05D006034 ORTHO05D007535 2.1e-53 213.8 236 47.0
CsaV3_UNG066530 Cucumis sativus L. HOM05D006034 ORTHO05D007535 1.0e-52 211.5 132 72.7
Sed0009633 Sechium edule HOM05D006034 ORTHO05D007535 1.0e-52 211.5 233 48.1
Carub.0007s1101 Capsella rubella HOM05D006034 ORTHO05D007535 1.3e-52 211.1 337 40.1
Medtr4g036675 Medicago truncatula HOM05D006034 ORTHO05D007535 1.3e-52 211.1 232 48.3
Psat1g049600 Pisum sativum HOM05D006034 ORTHO05D007535 5.1e-52 209.1 234 48.3
AL7G22860 Arabidopsis lyrata HOM05D006034 ORTHO05D007535 6.7e-52 208.8 337 45.7
VMungo0464G0679 Vigna mungo HOM05D006034 ORTHO05D007535 7.4e-51 205.3 232 47.8
BraA08t33919Z Brassica rapa HOM05D006034 ORTHO05D007535 1.3e-50 204.5 337 47.2
Thhalv10025613m.g Eutrema salsugineum HOM05D006034 ORTHO05D007535 1.6e-50 204.1 305 43.9
Sed0024135 Sechium edule HOM05D006034 ORTHO05D007535 1.6e-50 204.1 192 70.8
Pp3c5_18660 Physcomitrium patens HOM05D006034 ORTHO05D007535 2.1e-50 203.8 250 42.0
PGR142G3838 Punica granatum HOM05D006034 ORTHO05D007535 2.8e-50 203.4 338 43.8
A08p19610 Brassica napus HOM05D006034 ORTHO05D007535 3.7e-50 203.0 339 46.3
BcaB03g12611 Brassica carinata HOM05D006034 ORTHO05D007535 6.2e-50 202.2 337 46.6
Sp7g27400 Schrenkiella parvula HOM05D006034 ORTHO05D007535 8.1e-50 201.8 338 46.7
CARHR237370 Cardamine hirsuta HOM05D006034 ORTHO05D007535 1.4e-49 201.1 337 45.1
C03p89230 Brassica napus HOM05D006034 ORTHO05D007535 3.1e-49 199.9 337 47.5
Zm00001eb361670 Zea mays HOM05D006034 ORTHO05D007535 4.0e-49 199.5 317 45.4
BolC3t21232H Brassica oleracea HOM05D006034 ORTHO05D007535 1.5e-48 197.6 337 47.2
BcaC01g01176 Brassica carinata HOM05D006034 ORTHO05D007535 2.0e-48 197.2 337 46.9
AagrBONN_evm.TU.Sc2ySwM_228.1841 Anthoceros agrestis HOM05D006034 ORTHO05D007535 1.0e-47 194.9 289 39.8
Nn8g38904 Nelumbo nucifera HOM05D006034 ORTHO05D007535 1.3e-47 194.5 283 51.2
SMO118G0489 Selaginella moellendorffii HOM05D006034 ORTHO05D007535 1.3e-47 194.5 247 42.1
DCAR_011988 Daucus carota HOM05D006034 ORTHO05D007535 3.2e-46 189.9 273 50.2
EL10Ac8g19307 Beta vulgaris HOM05D006034 ORTHO05D007535 7.1e-46 188.7 128 71.9
MSTRG.19527 Avicennia marina HOM05D006034 ORTHO05D007535 9.3e-46 188.3 201 50.7
TWI34G0201 Tripterygium wilfordii HOM05D006034 ORTHO05D007535 1.6e-45 187.6 127 66.1
Sc18g0001930 Simmondsia chinensis HOM05D006034 ORTHO05D007535 4.6e-45 186.0 192 63.0
THA.LOC104827538 Tarenaya hassleriana HOM05D006034 ORTHO05D007535 4.6e-45 186.0 333 42.6
CBR_g36936 Chara braunii HOM05D006034 ORTHO05D007535 5.1e-44 182.6 254 40.9
Ca_25619_v3 Cicer arietinum L. HOM05D006034 ORTHO05D007535 7.4e-43 178.7 205 51.7
FAN28G0362 Fragaria x ananassa HOM05D006034 ORTHO05D007535 6.2e-42 175.6 164 68.3
CSS0015474 Camellia sinensis var. sinensis HOM05D006034 ORTHO05D007535 2.6e-40 170.2 179 67.0
BcaC09g52218 Brassica carinata HOM05D006034 ORTHO05D007535 3.4e-40 169.9 138 58.0
AT4G29540 Arabidopsis thaliana HOM05D006034 ORTHO05D007535 1.3e-36 157.9 219 56.2
Duzib150G0162 Durio zibethinus HOM05D006034 ORTHO05D007535 1.3e-36 157.9 311 41.5
C01p09780 Brassica napus HOM05D006034 ORTHO05D007535 1.1e-35 154.8 151 58.9
Thecc.09G091900 Theobroma cacao HOM05D006034 ORTHO05D007535 1.1e-35 154.8 200 46.0
Phvul.004G171500 Phaseolus vulgaris HOM05D006034 ORTHO05D007535 3.7e-34 149.8 107 68.2
Atru.chr7.1566 Acer truncatum HOM05D006034 ORTHO05D007535 6.3e-34 149.1 211 57.3
Glyma.01G003200 Glycine max HOM05D006034 ORTHO05D007535 1.4e-33 147.9 200 42.5
Rhsim05G0022600 Rhododendron simsii HOM05D000085 ORTHO05D001756 1.4e-33 147.9 184 44.0
Aa31LG2G20940 Aethionema arabicum HOM05D006034 ORTHO05D007535 2.9e-31 140.2 380 34.5
C01p09940 Brassica napus HOM05D000577 ORTHO05D007535 1.4e-30 137.9 201 41.3
Hund24744 Selenicereus undatus HOM05D006034 ORTHO05D007535 1.8e-28 131.0 222 49.1
BcaC09g51741 Brassica carinata HOM05D000577 ORTHO05D007535 3.0e-28 130.2 234 35.5
MBI01_g02257_MAGBIO Magnolia biondii HOM05D006034 ORTHO05D007535 5.1e-28 129.4 178 43.3
C01p09900 Brassica napus HOM05D006034 ORTHO05D007535 2.0e-27 127.5 119 58.0
AUR62027411 Chenopodium quinoa HOM05D006034 ORTHO05D007535 5.3e-25 119.4 162 42.6
BolC1t00956H Brassica oleracea HOM05D000577 ORTHO05D001093 1.3e-23 114.8 196 38.3
BolC1t00940H Brassica oleracea HOM05D006034 ORTHO05D007535 6.1e-21 105.9 85 58.8
unitig_27.g24727 Utricularia gibba HOM05D006034 ORTHO05D007535 3.0e-20 103.6 128 60.9
CSS0007101 Camellia sinensis var. sinensis HOM05D006034 ORTHO05D007535 1.3e-18 98.2 65 70.8
Hma1.2p1_0800F.1_g220000 Hydrangea macrophylla HOM05D006034 ORTHO05D007535 2.4e-17 94.0 64 71.9
THA.LOC104814611 Tarenaya hassleriana HOM05D006034 ORTHO05D007535 3.5e-16 90.1 133 42.9
Ca_29456_v3 Cicer arietinum L. HOM05D003386 ORTHO05D007535 2.5e-14 84.0 127 39.4
PRCOL_00006271 Prasinoderma coloniale HOM05D006034 ORTHO05D007535 1.2e-13 81.6 119 36.1
CsaV3_UNG066540 Cucumis sativus L. HOM05D006034 ORTHO05D007535 3.0e-12 77.0 63 57.1
MD13G1273400 Malus domestica HOM05D006034 ORTHO05D007535 5.7e-11 72.8 157 31.8
Dinv36751 Davidia involucrata HOM05D006034 ORTHO05D007535 2.9e-07 60.5 47 57.4
BraA01t00799Z Brassica rapa HOM05D006034 ORTHO05D007535 1.5e-06 58.2 105 37.1


User provided reference genes

Program Settings