Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000538g0170 Nicotiana tabacum HOM05D021330 ORTHO05D000006 1.3e-57 226.1 112 100.0
Nitab4.5_0000064g0120 Nicotiana tabacum HOM05D041081 ORTHO05D000006 6.9e-30 134.0 77 81.8
Nitab4.5_0000985g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000006 1.5e-29 132.9 145 49.7
Nitab4.5_0000097g0160 Nicotiana tabacum HOM05D021330 ORTHO05D000006 1.1e-24 116.7 113 61.9
Nitab4.5_0000393g0030 Nicotiana tabacum HOM05D021330 ORTHO05D012449 3.8e-20 101.7 119 54.6
Nitab4.5_0000197g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000006 6.7e-17 90.9 70 57.1
Nitab4.5_0000113g0230 Nicotiana tabacum HOM05D000003 ORTHO05D000006 1.2e-16 90.1 76 55.3
Nitab4.5_0001920g0080 Nicotiana tabacum HOM05D010714 ORTHO05D000006 9.7e-16 87.0 66 56.1
Nitab4.5_0000344g0040 Nicotiana tabacum HOM05D000003 ORTHO05D000006 1.7e-15 86.3 72 52.8
Nitab4.5_0001175g0190 Nicotiana tabacum HOM05D000003 ORTHO05D000283 1.7e-15 86.3 73 53.4
Peaxi162Scf00030g10015 Petunia axillaris HOM05D000040 ORTHO05D000759 3.7e-15 85.1 75 54.7
Nitab4.5_0000400g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000006 6.3e-15 84.3 76 46.1
Nitab4.5_0008260g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000006 1.1e-14 83.6 67 55.2
Nitab4.5_0000175g0270 Nicotiana tabacum HOM05D010714 ORTHO05D000006 2.4e-14 82.4 54 74.1
Nitab4.5_0002251g0030 Nicotiana tabacum HOM05D000003 ORTHO05D000006 2.4e-14 82.4 58 62.1
Nitab4.5_0004986g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000006 7.0e-14 80.9 60 60.0
Nitab4.5_0000060g0070 Nicotiana tabacum HOM05D023962 ORTHO05D000006 1.2e-13 80.1 85 45.9
Nitab4.5_0004062g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000006 3.5e-13 78.6 76 43.4
Sopen09g011430 Solanum pennellii HOM05D000003 ORTHO05D000004 3.5e-13 78.6 109 33.9
Nitab4.5_0000992g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000006 1.7e-12 76.3 74 44.6
Nitab4.5_0004394g0010 Nicotiana tabacum HOM05D021330 ORTHO05D012449 2.2e-12 75.9 104 50.0
Nitab4.5_0001834g0030 Nicotiana tabacum HOM05D021330 ORTHO05D000006 2.9e-12 75.5 105 46.7
Nitab4.5_0000044g0450 Nicotiana tabacum HOM05D000024 ORTHO05D000006 3.8e-12 75.1 114 36.8
Sopen00g005320 Solanum pennellii HOM05D000003 ORTHO05D000004 1.5e-11 73.2 131 37.4
Sopen00g010250 Solanum pennellii HOM05D000003 ORTHO05D000004 1.9e-11 72.8 131 37.4
EL10Ac4g09271 Beta vulgaris HOM05D000003 ORTHO05D000006 3.2e-11 72.0 126 34.9
Nitab4.5_0010972g0010 Nicotiana tabacum HOM05D021330 ORTHO05D000006 5.5e-11 71.2 72 52.8
Psat0s234g0040 Pisum sativum HOM05D000003 ORTHO05D000006 9.4e-11 70.5 113 34.5
Nitab4.5_0009867g0050 Nicotiana tabacum HOM05D000003 ORTHO05D000006 1.2e-10 70.1 66 51.5
CAN.G276.7 Capsicum annuum HOM05D000024 ORTHO05D000006 1.6e-10 69.7 74 43.2
Sopen00g009450 Solanum pennellii HOM05D000003 ORTHO05D000004 1.6e-10 69.7 147 31.3
Sopen05g013420 Solanum pennellii HOM05D000003 ORTHO05D000004 1.6e-10 69.7 146 31.5
Sopen00g008000 Solanum pennellii HOM05D000003 ORTHO05D000004 6.1e-10 67.8 121 33.9
TPR.G13276 Trifolium pratense HOM05D000003 ORTHO05D000004 6.1e-10 67.8 65 47.7
Psat0s1357g0040 Pisum sativum HOM05D000003 ORTHO05D000006 8.0e-10 67.4 67 47.8
Psat2g089560 Pisum sativum HOM05D000003 ORTHO05D000004 8.0e-10 67.4 67 47.8
Psat2g100080 Pisum sativum HOM05D000003 ORTHO05D000006 8.0e-10 67.4 67 47.8
Psat5g282240 Pisum sativum HOM05D000003 ORTHO05D000004 8.0e-10 67.4 67 47.8
Sopen00g011080 Solanum pennellii HOM05D000003 ORTHO05D000006 8.0e-10 67.4 145 26.9
CAN.G79.73 Capsicum annuum HOM05D000003 ORTHO05D000006 1.8e-09 66.2 73 38.4
Psat4g187720 Pisum sativum HOM05D000003 ORTHO05D000006 1.8e-09 66.2 137 32.1
Sopen00g004670 Solanum pennellii HOM05D000003 ORTHO05D000004 2.3e-09 65.9 147 29.9
Sopen10g008120 Solanum pennellii HOM05D000003 ORTHO05D000004 2.3e-09 65.9 121 33.1
EL10Ac1g01948 Beta vulgaris HOM05D000003 ORTHO05D000006 3.0e-09 65.5 67 37.3
Psat7g191840 Pisum sativum HOM05D000003 ORTHO05D000006 3.0e-09 65.5 65 50.8
Nitab4.5_0002126g0090 Nicotiana tabacum HOM05D000003 ORTHO05D000006 5.2e-09 64.7 66 54.5
Nitab4.5_0002317g0030 Nicotiana tabacum HOM05D000003 ORTHO05D000006 5.2e-09 64.7 127 33.1
Sopen00g010420 Solanum pennellii HOM05D000003 ORTHO05D000007 5.2e-09 64.7 145 31.7
Nitab4.5_0000835g0050 Nicotiana tabacum HOM05D000003 ORTHO05D000006 6.8e-09 64.3 73 38.4
CAN.G321.6 Capsicum annuum HOM05D000003 ORTHO05D000006 8.8e-09 63.9 75 40.0
Nitab4.5_0001811g0040 Nicotiana tabacum HOM05D036377 ORTHO05D000006 8.8e-09 63.9 56 50.0
Hund04109 Selenicereus undatus HOM05D018245 ORTHO05D000006 8.8e-09 63.9 69 42.0
Sopen12g013630 Solanum pennellii HOM05D000003 ORTHO05D000004 8.8e-09 63.9 147 28.6
Sopen00g005560 Solanum pennellii HOM05D000003 ORTHO05D000006 1.2e-08 63.5 144 25.7
Sopen12g011700 Solanum pennellii HOM05D000003 ORTHO05D000004 1.2e-08 63.5 147 29.3
TPR.G1529 Trifolium pratense HOM05D000003 ORTHO05D000004 1.5e-08 63.2 75 40.0
Nitab4.5_0000098g0170 Nicotiana tabacum HOM05D023962 ORTHO05D000006 2.0e-08 62.8 69 39.1
Nitab4.5_0000752g0050 Nicotiana tabacum HOM05D000003 ORTHO05D000283 2.0e-08 62.8 137 29.2
Psat1g220680 Pisum sativum HOM05D000003 ORTHO05D000004 2.0e-08 62.8 73 45.2
Sopen00g004730 Solanum pennellii HOM05D000003 ORTHO05D000004 2.6e-08 62.4 145 27.6
PGSC0003DMG400038802 Solanum tuberosum HOM05D000024 ORTHO05D000006 2.6e-08 62.4 73 38.4
Sopen00g004660 Solanum pennellii HOM05D000003 ORTHO05D000004 3.4e-08 62.0 76 35.5
Sopen00g007130 Solanum pennellii HOM05D000003 ORTHO05D000004 3.4e-08 62.0 144 30.6
Sopen12g011790 Solanum pennellii HOM05D000003 ORTHO05D000004 3.4e-08 62.0 76 36.8
Actinidia10935 Actinidia chinensis HOM05D000003 ORTHO05D000006 4.4e-08 61.6 148 27.7
Hund10220 Selenicereus undatus HOM05D000003 ORTHO05D000007 4.4e-08 61.6 69 39.1
Hund30059 Selenicereus undatus HOM05D000003 ORTHO05D000006 4.4e-08 61.6 126 28.6
Sopen07g017460 Solanum pennellii HOM05D000003 ORTHO05D000006 4.4e-08 61.6 108 31.5
EL10Ac1g01215 Beta vulgaris HOM05D000003 ORTHO05D000006 7.5e-08 60.8 56 44.6
CANSAT54G1864 Cannabis sativa HOM05D000003 ORTHO05D000004 7.5e-08 60.8 78 33.3
Nitab4.5_0009525g0010 Nicotiana tabacum HOM05D010714 ORTHO05D000006 7.5e-08 60.8 56 48.2
Nitab4.5_0009570g0030 Nicotiana tabacum HOM05D010714 ORTHO05D000006 7.5e-08 60.8 50 50.0
Nitab4.5_0008412g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000006 9.8e-08 60.5 70 41.4
Hund22672 Selenicereus undatus HOM05D000003 ORTHO05D000006 9.8e-08 60.5 68 42.6
Sopen00g004290 Solanum pennellii HOM05D000003 ORTHO05D000004 9.8e-08 60.5 111 30.6
Sopen00g004530 Solanum pennellii HOM05D000003 ORTHO05D000004 9.8e-08 60.5 142 26.8
Sopen05g020920 Solanum pennellii HOM05D000003 ORTHO05D000004 9.8e-08 60.5 86 34.9
EL10Ac7g17929 Beta vulgaris HOM05D000003 ORTHO05D000006 1.3e-07 60.1 106 31.1
Nitab4.5_0002008g0080 Nicotiana tabacum HOM05D010714 ORTHO05D000006 1.7e-07 59.7 56 53.6
Nitab4.5_0013534g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000006 2.2e-07 59.3 61 45.9
Nitab4.5_0000268g0110 Nicotiana tabacum HOM05D010714 ORTHO05D000006 2.8e-07 58.9 45 55.6
Atru.chr3.2964 Acer truncatum HOM05D000003 ORTHO05D000006 3.7e-07 58.5 67 38.8
CANSAT25G3393 Cannabis sativa HOM05D000024 ORTHO05D000006 3.7e-07 58.5 79 38.0
CANSAT53G0001 Cannabis sativa HOM05D000003 ORTHO05D000006 3.7e-07 58.5 78 32.1
Nitab4.5_0001280g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000006 3.7e-07 58.5 93 37.6
QL03p012384 Quercus lobata HOM05D000003 ORTHO05D000006 3.7e-07 58.5 110 30.9
Aqoxy3G01612 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.8e-07 58.2 75 40.0
Aqoxy3G02413 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.8e-07 58.2 75 40.0
Sopen00g008350 Solanum pennellii HOM05D000003 ORTHO05D000004 4.8e-07 58.2 136 27.2
Aqoxy4G01060 Aquilegia oxysepala HOM05D002351 ORTHO05D000006 6.3e-07 57.8 148 26.4
CANSAT80G0153 Cannabis sativa HOM05D000003 ORTHO05D000004 6.3e-07 57.8 76 36.8
Aqoxy2G02009 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 8.3e-07 57.4 81 34.6
Sopen00g006870 Solanum pennellii HOM05D000003 ORTHO05D000004 8.3e-07 57.4 147 27.2
Sopen00g007950 Solanum pennellii HOM05D000003 ORTHO05D000004 8.3e-07 57.4 110 26.4
Aqoxy7G02314 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 1.1e-06 57.0 67 35.8
Aqoxy7G02651 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 1.1e-06 57.0 67 35.8
CANSAT54G1272 Cannabis sativa HOM05D000003 ORTHO05D000006 1.1e-06 57.0 75 37.3
Nitab4.5_0000819g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.1e-06 57.0 53 43.4
Nitab4.5_0005611g0070 Nicotiana tabacum HOM05D000003 ORTHO05D000006 1.1e-06 57.0 45 55.6
Nitab4.5_0025949g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000006 1.1e-06 57.0 45 55.6
Peaxi162Scf00169g00172 Petunia axillaris HOM05D000003 ORTHO05D000006 1.1e-06 57.0 73 38.4
Sopen03g003960 Solanum pennellii HOM05D000003 ORTHO05D000006 1.1e-06 57.0 123 27.6
Aqoxy4G01227 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 1.4e-06 56.6 50 40.0
Aqoxy4G01255 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.4e-06 56.6 50 40.0
Hund01411 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.4e-06 56.6 75 41.3
TPR.G23566 Trifolium pratense HOM05D000003 ORTHO05D000007 1.4e-06 56.6 87 33.3
TPR.G8630 Trifolium pratense HOM05D000003 ORTHO05D000004 1.4e-06 56.6 73 38.4
EL10Ac7g17173 Beta vulgaris HOM05D000003 ORTHO05D000006 1.8e-06 56.2 65 36.9
Sopen00g008680 Solanum pennellii HOM05D000003 ORTHO05D000004 1.8e-06 56.2 144 25.7
TPR.G7953 Trifolium pratense HOM05D000003 ORTHO05D000004 1.8e-06 56.2 89 30.3
Aqoxy2G01536 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 2.4e-06 55.8 79 32.9
EL10Ac1g02205 Beta vulgaris HOM05D000003 ORTHO05D000007 2.4e-06 55.8 60 43.3
CAN.G144.6 Capsicum annuum HOM05D000003 ORTHO05D000006 2.4e-06 55.8 74 32.4
Cpa.g.sc670.3 Carica papaya HOM05D010178 ORTHO05D000006 2.4e-06 55.8 75 33.3
Sopen00g004600 Solanum pennellii HOM05D000003 ORTHO05D000004 2.4e-06 55.8 78 34.6
Aqoxy1G03910 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.1e-06 55.5 96 32.3
Aqoxy6G01288 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 3.1e-06 55.5 69 36.2
CANSAT11G0988 Cannabis sativa HOM05D000003 ORTHO05D000007 3.1e-06 55.5 78 32.1
CANSAT80G2213 Cannabis sativa HOM05D000003 ORTHO05D000006 3.1e-06 55.5 75 36.0
COL.COLO4_07190 Corchorus olitorius HOM05D000003 ORTHO05D000006 3.1e-06 55.5 76 32.9
CANSAT25G1553 Cannabis sativa HOM05D000003 ORTHO05D000006 4.1e-06 55.1 53 43.4
CANSAT35G1839 Cannabis sativa HOM05D000024 ORTHO05D000006 4.1e-06 55.1 78 37.2
CANSAT64G0531 Cannabis sativa HOM05D000003 ORTHO05D000007 4.1e-06 55.1 74 36.5
AUR62015316 Chenopodium quinoa HOM05D000003 ORTHO05D000004 4.1e-06 55.1 71 36.6
MBI17_g43004_MAGBIO Magnolia biondii HOM05D000024 ORTHO05D000006 4.1e-06 55.1 73 37.0
PGR119G2417 Punica granatum HOM05D000003 ORTHO05D000004 4.1e-06 55.1 110 30.0
QL01p027762 Quercus lobata HOM05D000003 ORTHO05D000006 4.1e-06 55.1 64 40.6
QL01p027824 Quercus lobata HOM05D000003 ORTHO05D000006 4.1e-06 55.1 64 40.6
CANSAT25G2861 Cannabis sativa HOM05D000003 ORTHO05D000006 5.4e-06 54.7 62 41.9
Nitab4.5_0001154g0070 Nicotiana tabacum HOM05D000003 ORTHO05D000006 5.4e-06 54.7 64 37.5
Nitab4.5_0006483g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000007 5.4e-06 54.7 67 35.8
Oeu000130.1 Olea europaea HOM05D000003 ORTHO05D000006 5.4e-06 54.7 74 35.1
Hund08810 Selenicereus undatus HOM05D000003 ORTHO05D000007 5.4e-06 54.7 138 25.4
Hund10361 Selenicereus undatus HOM05D000003 ORTHO05D000006 5.4e-06 54.7 129 31.8
SGA_v2.0_scaffold255G45341 Striga asiatica HOM05D000003 ORTHO05D000006 5.4e-06 54.7 54 40.7
EL10Ac2g03381 Beta vulgaris HOM05D000003 ORTHO05D000006 7.0e-06 54.3 75 33.3
CANSAT54G1020 Cannabis sativa HOM05D000003 ORTHO05D000004 7.0e-06 54.3 76 35.5
CANSAT78G2454 Cannabis sativa HOM05D000003 ORTHO05D000006 7.0e-06 54.3 71 32.4
Nitab4.5_0002681g0040 Nicotiana tabacum HOM05D000003 ORTHO05D000006 7.0e-06 54.3 135 28.9
Nitab4.5_0008849g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000006 7.0e-06 54.3 53 43.4
Oeu014514.1 Olea europaea HOM05D000003 ORTHO05D000006 7.0e-06 54.3 77 32.5
Hund07377 Selenicereus undatus HOM05D000185 ORTHO05D000105 7.0e-06 54.3 57 42.1
Sopen00g009820 Solanum pennellii HOM05D000003 ORTHO05D000004 7.0e-06 54.3 133 29.3
Sopen00g012830 Solanum pennellii HOM05D000003 ORTHO05D000004 7.0e-06 54.3 78 33.3
PGSC0003DMG400012502 Solanum tuberosum HOM05D000003 ORTHO05D000004 7.0e-06 54.3 64 34.4
PGSC0003DMG400023605 Solanum tuberosum HOM05D000003 ORTHO05D000004 7.0e-06 54.3 64 34.4
Aqoxy5G02895 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 9.1e-06 53.9 78 34.6
Sabra15G0020900 Salix brachista HOM05D000003 ORTHO05D000006 9.1e-06 53.9 73 32.9
Sopen00g006340 Solanum pennellii HOM05D000003 ORTHO05D000004 9.1e-06 53.9 65 38.5
TPR.G35752 Trifolium pratense HOM05D000003 ORTHO05D010993 9.1e-06 53.9 73 37.0


User provided reference genes

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