Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000537g0170 Nicotiana tabacum HOM05D007353 ORTHO05D009077 1.1e-98 363.2 180 100.0
Nitab4.5_0000007g0160 Nicotiana tabacum HOM05D007353 ORTHO05D009077 2.7e-36 156.0 111 73.0
Nitab4.5_0000076g0010 Nicotiana tabacum HOM05D007353 ORTHO05D009077 1.4e-32 143.7 117 65.0
Nitab4.5_0002402g0020 Nicotiana tabacum HOM05D007353 ORTHO05D009077 5.4e-32 141.7 103 68.0
Nitab4.5_0007144g0070 Nicotiana tabacum HOM05D007353 ORTHO05D009077 1.2e-31 140.6 118 68.6
Nitab4.5_0004337g0020 Nicotiana tabacum HOM05D007353 ORTHO05D009077 9.5e-29 131.0 108 63.9
Nitab4.5_0000344g0140 Nicotiana tabacum HOM05D007353 ORTHO05D009077 4.7e-28 128.6 166 46.4
Nitab4.5_0002297g0130 Nicotiana tabacum HOM05D007353 ORTHO05D009077 2.6e-26 122.9 103 64.1
Nitab4.5_0003995g0020 Nicotiana tabacum HOM05D007353 ORTHO05D009077 2.6e-26 122.9 198 43.4
Nitab4.5_0003202g0070 Nicotiana tabacum HOM05D007353 ORTHO05D009077 8.3e-25 117.9 94 67.0
Nitab4.5_0003671g0070 Nicotiana tabacum HOM05D007353 ORTHO05D009077 5.4e-24 115.2 82 74.4
Nitab4.5_0002450g0100 Nicotiana tabacum HOM05D007353 ORTHO05D009077 9.2e-24 114.4 68 85.3
Nitab4.5_0000787g0250 Nicotiana tabacum HOM05D007353 ORTHO05D009077 1.2e-23 114.0 68 85.3
Nitab4.5_0001611g0170 Nicotiana tabacum HOM05D007353 ORTHO05D009077 3.5e-23 112.5 168 43.5
Nitab4.5_0003019g0060 Nicotiana tabacum HOM05D007353 ORTHO05D009077 1.0e-22 110.9 97 61.9
Nitab4.5_0007409g0050 Nicotiana tabacum HOM05D007353 ORTHO05D009077 5.0e-22 108.6 176 40.9
Nitab4.5_0000103g0230 Nicotiana tabacum HOM05D007353 ORTHO05D009077 1.9e-21 106.7 76 67.1
Nitab4.5_0000363g0230 Nicotiana tabacum HOM05D000041 ORTHO05D000061 1.9e-21 106.7 79 68.4
Nitab4.5_0002040g0010 Nicotiana tabacum HOM05D007353 ORTHO05D009077 4.3e-21 105.5 76 72.4
Nitab4.5_0004496g0090 Nicotiana tabacum HOM05D007353 ORTHO05D009077 4.3e-21 105.5 144 45.8
Nitab4.5_0001212g0060 Nicotiana tabacum HOM05D007353 ORTHO05D009077 5.6e-21 105.1 91 62.6
Nitab4.5_0000032g0230 Nicotiana tabacum HOM05D007353 ORTHO05D009077 1.2e-20 104.0 98 58.2
Nitab4.5_0001438g0150 Nicotiana tabacum HOM05D007353 ORTHO05D009077 2.8e-20 102.8 86 64.0
Nitab4.5_0003677g0040 Nicotiana tabacum HOM05D007353 ORTHO05D009077 4.7e-20 102.1 143 46.9
Nitab4.5_0004515g0050 Nicotiana tabacum HOM05D007353 ORTHO05D009077 4.7e-20 102.1 90 61.1
Nitab4.5_0002464g0050 Nicotiana tabacum HOM05D007353 ORTHO05D009077 8.0e-20 101.3 177 40.1
Nitab4.5_0000348g0170 Nicotiana tabacum HOM05D007353 ORTHO05D009077 5.2e-19 98.6 96 59.4
Nitab4.5_0001551g0100 Nicotiana tabacum HOM05D007353 ORTHO05D009077 5.2e-19 98.6 80 67.5
Nitab4.5_0009805g0020 Nicotiana tabacum HOM05D007353 ORTHO05D009077 5.2e-19 98.6 169 42.6
Nitab4.5_0001357g0170 Nicotiana tabacum HOM05D007353 ORTHO05D009077 2.6e-18 96.3 90 58.9
Nitab4.5_0001543g0020 Nicotiana tabacum HOM05D007353 ORTHO05D009077 2.6e-18 96.3 80 67.5
Nitab4.5_0003133g0030 Nicotiana tabacum HOM05D007353 ORTHO05D009077 4.4e-18 95.5 65 73.8
Nitab4.5_0007634g0010 Nicotiana tabacum HOM05D007353 ORTHO05D009077 4.4e-18 95.5 77 66.2
Nitab4.5_0009170g0010 Nicotiana tabacum HOM05D007353 ORTHO05D009077 4.4e-18 95.5 93 60.2
Nitab4.5_0000457g0050 Nicotiana tabacum HOM05D007353 ORTHO05D009077 9.8e-18 94.4 101 56.4
Nitab4.5_0001873g0090 Nicotiana tabacum HOM05D007353 ORTHO05D009077 9.8e-18 94.4 67 70.1
Nitab4.5_0005201g0030 Nicotiana tabacum HOM05D002477 ORTHO05D001927 1.7e-17 93.6 67 68.7
Nitab4.5_0002492g0010 Nicotiana tabacum HOM05D007353 ORTHO05D009077 3.7e-17 92.4 139 42.4
Nitab4.5_0001444g0100 Nicotiana tabacum HOM05D007353 ORTHO05D009077 4.9e-17 92.0 78 60.3
Nitab4.5_0000023g0010 Nicotiana tabacum HOM05D007353 ORTHO05D009077 6.4e-17 91.7 95 61.1
Nitab4.5_0002464g0030 Nicotiana tabacum HOM05D007353 ORTHO05D009077 6.4e-17 91.7 180 37.2
Nitab4.5_0004338g0150 Nicotiana tabacum HOM05D007353 ORTHO05D009077 8.3e-17 91.3 81 61.7
MELO3C028927.2 Cucumis melo HOM05D000924 ORTHO05D001209 1.8e-16 90.1 125 42.4
Sopen12g026550 Solanum pennellii HOM05D000004 ORTHO05D000002 2.4e-16 89.7 108 44.4
Nitab4.5_0000981g0040 Nicotiana tabacum HOM05D007353 ORTHO05D009077 5.4e-16 88.6 78 62.8
Nitab4.5_0004199g0020 Nicotiana tabacum HOM05D007353 ORTHO05D009077 5.4e-16 88.6 81 59.3
Nitab4.5_0001997g0080 Nicotiana tabacum HOM05D007353 ORTHO05D009077 1.2e-15 87.4 80 62.5
Nitab4.5_0013583g0010 Nicotiana tabacum HOM05D007353 ORTHO05D009077 1.2e-15 87.4 74 56.8
Sopen02g009660 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-15 87.4 73 54.8
Nitab4.5_0004577g0020 Nicotiana tabacum HOM05D007353 ORTHO05D009077 2.0e-15 86.7 80 62.5
Nitab4.5_0011984g0040 Nicotiana tabacum HOM05D007353 ORTHO05D009077 2.0e-15 86.7 67 64.2
Nitab4.5_0014586g0010 Nicotiana tabacum HOM05D007353 ORTHO05D009077 5.9e-15 85.1 63 71.4
TPR.G18340 Trifolium pratense HOM05D000002 ORTHO05D000001 5.9e-15 85.1 72 56.9
Nitab4.5_0003086g0090 Nicotiana tabacum HOM05D007353 ORTHO05D009077 2.3e-14 83.2 186 35.5
ClCG06G007940 Citrullus lanatus HOM05D007353 ORTHO05D009077 3.9e-14 82.4 159 37.1
Nitab4.5_0002229g0250 Nicotiana tabacum HOM05D007353 ORTHO05D009077 6.6e-14 81.6 60 66.7
Nitab4.5_0009892g0050 Nicotiana tabacum HOM05D007353 ORTHO05D009077 1.1e-13 80.9 101 48.5
Nitab4.5_0008824g0030 Nicotiana tabacum HOM05D007353 ORTHO05D009077 1.5e-13 80.5 43 88.4
Nitab4.5_0001027g0120 Nicotiana tabacum HOM05D007353 ORTHO05D009077 1.9e-13 80.1 68 64.7
Sopen01g023390 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-13 79.7 131 42.0
CAN.G1091.9 Capsicum annuum HOM05D007353 ORTHO05D009077 3.3e-13 79.3 105 44.8
Ah.16g104740 Amaranthus hybridus HOM05D007353 ORTHO05D009077 7.3e-13 78.2 86 52.3
Nitab4.5_0002166g0060 Nicotiana tabacum HOM05D007353 ORTHO05D009077 6.2e-12 75.1 167 35.3
Ah.06g185680 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.8e-11 73.6 123 42.3
Nitab4.5_0000767g0060 Nicotiana tabacum HOM05D007353 ORTHO05D009077 2.3e-11 73.2 81 50.6
Nitab4.5_0002173g0020 Nicotiana tabacum HOM05D007353 ORTHO05D009077 3.1e-11 72.8 68 63.2
Ah.10g030160 Amaranthus hybridus HOM05D000002 ORTHO05D000001 8.9e-11 71.2 123 40.7
AUR62004989 Chenopodium quinoa HOM05D000002 ORTHO05D000001 8.9e-11 71.2 107 37.4
Nitab4.5_0007343g0010 Nicotiana tabacum HOM05D007353 ORTHO05D009077 8.9e-11 71.2 55 65.5
Nitab4.5_0002759g0130 Nicotiana tabacum HOM05D007353 ORTHO05D009077 1.2e-10 70.9 56 66.1
Nitab4.5_0014477g0010 Nicotiana tabacum HOM05D007353 ORTHO05D009077 1.2e-10 70.9 68 54.4
Nitab4.5_0009278g0040 Nicotiana tabacum HOM05D007353 ORTHO05D009077 1.5e-10 70.5 54 66.7
MELO3C025626.2 Cucumis melo HOM05D000109 ORTHO05D000965 2.6e-10 69.7 76 52.6
Nitab4.5_0000343g0270 Nicotiana tabacum HOM05D007353 ORTHO05D009077 2.6e-10 69.7 75 52.0
Ah.11g040110 Amaranthus hybridus HOM05D000002 ORTHO05D000001 9.8e-10 67.8 58 56.9
Nitab4.5_0008732g0020 Nicotiana tabacum HOM05D007353 ORTHO05D009077 2.2e-09 66.6 35 88.6
Sopen01g029300 Solanum pennellii HOM05D000002 ORTHO05D000001 2.2e-09 66.6 75 52.0
Nitab4.5_0018689g0010 Nicotiana tabacum HOM05D007353 ORTHO05D009077 4.9e-09 65.5 59 61.0
ClCG09G015080 Citrullus lanatus HOM05D007353 ORTHO05D009077 6.4e-09 65.1 62 54.8
Nitab4.5_0000026g0130 Nicotiana tabacum HOM05D007353 ORTHO05D009077 1.4e-08 63.9 77 50.6
Nitab4.5_0006432g0030 Nicotiana tabacum HOM05D007353 ORTHO05D009077 3.2e-08 62.8 98 48.0
ECA247G1552 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.1e-08 62.4 213 25.4
ECA246G0266 Erigeron canadensis HOM05D000793 ORTHO05D000783 7.0e-08 61.6 188 30.3
CAN.G1315.4 Capsicum annuum HOM05D001584 ORTHO05D001472 9.2e-08 61.2 191 30.4
ECA233G0916 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.2e-08 61.2 188 30.3
ECA234G0699 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.2e-08 61.2 188 29.8
ECA233G1049 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-07 60.8 188 30.3
FvH4_3g12191 Fragaria vesca HOM05D000002 ORTHO05D000001 1.2e-07 60.8 94 37.2
CAN.G975.12 Capsicum annuum HOM05D000002 ORTHO05D000001 1.6e-07 60.5 171 28.1
ClCG03G011030 Citrullus lanatus HOM05D007353 ORTHO05D009077 1.6e-07 60.5 64 56.2
ECA236G0149 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-07 60.5 161 29.8
ECA246G2397 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-07 60.5 188 30.3
ECA232G2917 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.0e-07 60.1 114 32.5
ECA232G1865 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.5e-07 59.3 188 29.8
ECA247G1739 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.5e-07 59.3 188 30.3
ECA234G2425 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.6e-07 58.9 175 26.3
ECA236G1088 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.6e-07 58.9 119 32.8
ECA240G2787 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.6e-07 58.9 188 30.3
ECA248G1829 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.6e-07 58.9 199 29.6
AUR62039694 Chenopodium quinoa HOM05D000078 ORTHO05D000025 6.0e-07 58.5 63 47.6
ECA232G0336 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.0e-07 58.5 188 29.8
AUR62042969 Chenopodium quinoa HOM05D009849 ORTHO05D044042 7.8e-07 58.2 102 38.2
ECA233G2864 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-06 57.4 188 29.8
ECA233G5063 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-06 57.4 95 33.7
CSS0046993 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-06 57.0 188 26.6
ECA233G0938 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-06 57.0 188 29.8
Sopen05g013590 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-06 57.0 171 25.1
Sopen10g022890 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-06 57.0 118 33.1
CSS0049295 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.3e-06 56.6 234 25.6
Sopen07g016960 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-06 56.6 181 27.1
Sopen12g017770 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-06 56.6 186 29.0
TAR161G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.3e-06 56.6 100 35.0
ECA240G2430 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.0e-06 56.2 195 29.7
Sopen03g025850 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 56.2 181 28.2
Sopen07g015810 Solanum pennellii HOM05D000002 ORTHO05D000001 3.9e-06 55.8 129 30.2
ECA247G3121 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.0e-06 55.5 152 29.6
Sopen02g001760 Solanum pennellii HOM05D000002 ORTHO05D000001 5.0e-06 55.5 129 30.2
CSS0009806 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.6e-06 55.1 188 25.5
CSS0023537 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.6e-06 55.1 188 25.5
CSS0034014 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.6e-06 55.1 188 25.5
CSS0040458 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.6e-06 55.1 188 25.5
CSS0043973 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.6e-06 55.1 188 25.5
Nitab4.5_0006335g0020 Nicotiana tabacum HOM05D007353 ORTHO05D009077 6.6e-06 55.1 69 43.5
Sopen05g022700 Solanum pennellii HOM05D000002 ORTHO05D000001 6.6e-06 55.1 181 26.5
CANSAT54G0940 Cannabis sativa HOM05D000002 ORTHO05D000001 8.6e-06 54.7 52 42.3
ECA238G3038 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.6e-06 54.7 188 28.7
Sopen03g024520 Solanum pennellii HOM05D000002 ORTHO05D000001 8.6e-06 54.7 129 30.2
Sopen06g009700 Solanum pennellii HOM05D000002 ORTHO05D000001 8.6e-06 54.7 181 26.5
Sopen06g015960 Solanum pennellii HOM05D000002 ORTHO05D000001 8.6e-06 54.7 129 30.2
Sopen12g019660 Solanum pennellii HOM05D000002 ORTHO05D000001 8.6e-06 54.7 181 26.5


User provided reference genes

Program Settings