Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000535g0140 Nicotiana tabacum HOM05D006861 ORTHO05D008620 1.3e-128 463.0 228 100.0
Nitab4.5_0007026g0050 Nicotiana tabacum HOM05D006861 ORTHO05D008620 7.8e-121 437.2 234 92.3
PGSC0003DMG400020500 Solanum tuberosum HOM05D006861 ORTHO05D008620 3.0e-112 408.7 219 90.4
Solyc08g007030.3 Solanum lycopersicum HOM05D006861 ORTHO05D008620 1.6e-110 402.9 219 89.0
Sopen08g002990 Solanum pennellii HOM05D006861 ORTHO05D008620 3.1e-109 398.7 219 88.1
Peaxi162Scf00102g00630 Petunia axillaris HOM05D006861 ORTHO05D008620 4.9e-107 391.3 228 85.1
CAN.G845.34 Capsicum annuum HOM05D006861 ORTHO05D008620 1.2e-105 386.7 216 86.1
Actinidia14818 Actinidia chinensis HOM05D006861 ORTHO05D008620 5.8e-84 314.7 229 68.6
GSVIVG01013176001 Vitis vinifera HOM05D006861 ORTHO05D008620 2.9e-83 312.4 212 69.8
Cc08_g02400 Coffea canephora HOM05D006861 ORTHO05D008620 3.9e-80 302.0 233 63.9
Dinv28930 Davidia involucrata HOM05D006861 ORTHO05D008620 1.5e-79 300.1 228 65.4
Manes.17G013800 Manihot esculenta HOM05D006861 ORTHO05D008620 1.5e-79 300.1 219 66.2
CSS0041220 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 1.6e-78 296.6 229 63.3
MSTRG.12154 Avicennia marina HOM05D006861 ORTHO05D008620 4.8e-78 295.0 217 64.1
SalBow6G5529 Salvia bowleyana HOM05D006861 ORTHO05D008620 8.2e-78 294.3 216 62.5
CSS0014670 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 1.1e-77 293.9 229 62.4
Hma1.2p1_0585F.1_g183570 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 1.4e-77 293.5 226 64.6
Sc07g0008780 Simmondsia chinensis HOM05D006861 ORTHO05D008620 1.4e-77 293.5 232 61.2
Migut.A01006 Erythranthe guttata HOM05D006861 ORTHO05D008620 2.4e-77 292.7 217 64.1
Medtr4g098640 Medicago truncatula HOM05D006861 ORTHO05D008620 2.4e-77 292.7 222 64.4
Potri.003G089400 Populus trichocarpa HOM05D006861 ORTHO05D008620 4.1e-77 292.0 226 62.4
Ah.12g054700 Amaranthus hybridus HOM05D006861 ORTHO05D008620 5.3e-77 291.6 231 61.0
ATR0049G013 Amborella trichopoda HOM05D006861 ORTHO05D008620 2.0e-76 289.7 216 63.0
QL12p006269 Quercus lobata HOM05D006861 ORTHO05D008620 2.6e-76 289.3 246 58.9
CANSAT21G0325 Cannabis sativa HOM05D006861 ORTHO05D008620 7.7e-76 287.7 218 62.8
DCAR_008287 Daucus carota HOM05D006861 ORTHO05D008620 2.9e-75 285.8 216 63.0
Psat4g079280 Pisum sativum HOM05D006861 ORTHO05D008620 2.9e-75 285.8 216 63.9
Rhsim07G0124500 Rhododendron simsii HOM05D006861 ORTHO05D008620 5.0e-75 285.0 230 62.6
AUR62007255 Chenopodium quinoa HOM05D006861 ORTHO05D008620 8.5e-75 284.3 225 60.0
Lsat_1_v5_gn_8_112001 Lactuca sativa HOM05D006861 ORTHO05D008620 1.9e-74 283.1 217 60.4
TPR.G28655 Trifolium pratense HOM05D006861 ORTHO05D008620 7.2e-74 281.2 216 63.9
CiPaw.11G090800 Carya illinoinensis HOM05D006861 ORTHO05D008620 1.2e-73 280.4 224 59.8
Ca_22062_v3 Cicer arietinum L. HOM05D006861 ORTHO05D008620 2.7e-73 279.3 217 64.1
SGA_v2.0_scaffold198G41105 Striga asiatica HOM05D006861 ORTHO05D008620 3.6e-73 278.9 216 60.6
Sabra03G0059200 Salix brachista HOM05D006861 ORTHO05D008620 4.6e-73 278.5 226 60.2
EL10Ac5g12163 Beta vulgaris HOM05D006861 ORTHO05D008620 7.9e-73 277.7 229 59.0
Prupe.5G041200 Prunus persica HOM05D006861 ORTHO05D008620 7.9e-73 277.7 221 59.7
FvH4_5g21620 Fragaria vesca HOM05D006861 ORTHO05D008620 1.4e-72 276.9 212 61.8
MD06G1031100 Malus domestica HOM05D006861 ORTHO05D008620 1.4e-72 276.9 211 62.6
Thecc.03G231500 Theobroma cacao HOM05D006861 ORTHO05D008620 1.8e-72 276.6 228 60.1
Lj4g0014575 Lotus japonicus HOM05D006861 ORTHO05D008620 2.3e-72 276.2 222 59.5
FAN18G0349 Fragaria x ananassa HOM05D006861 ORTHO05D008620 3.0e-72 275.8 209 62.2
HanXRQChr16g0511531 Helianthus annuus HOM05D006861 ORTHO05D008620 3.0e-72 275.8 211 61.6
Cfa012408 Carpinus fangiana HOM05D006861 ORTHO05D008620 5.1e-72 275.0 214 62.6
Haze_08270 Corylus avellana HOM05D006861 ORTHO05D008620 5.1e-72 275.0 220 61.4
VMungo0251G0361 Vigna mungo HOM05D006861 ORTHO05D008620 5.1e-72 275.0 217 62.2
RcHm_v2.0_Chr7g0209081 Rosa chinensis HOM05D006861 ORTHO05D008620 8.8e-72 274.2 219 58.9
arahy.Tifrunner.gnm1.ann1.A00F14 Arachis hypogaea HOM05D006861 ORTHO05D008620 1.5e-71 273.5 211 63.5
TAR629G3318 Trochodendron aralioides HOM05D006861 ORTHO05D008620 2.0e-71 273.1 231 59.7
arahy.Tifrunner.gnm1.ann1.P9U8RJ Arachis hypogaea HOM05D006861 ORTHO05D008620 2.5e-71 272.7 226 60.6
Gohir.D12G212500 Gossypium hirsutum HOM05D006861 ORTHO05D008620 2.5e-71 272.7 228 59.6
Ciclev10032685m.g Citrus clementina HOM05D006861 ORTHO05D008620 3.3e-71 272.3 222 61.3
Gohir.A12G209800 Gossypium hirsutum HOM05D006861 ORTHO05D008620 3.3e-71 272.3 228 59.2
CsaV3_3G001910 Cucumis sativus L. HOM05D006861 ORTHO05D008620 5.7e-71 271.6 227 56.4
QL12p006401 Quercus lobata HOM05D006861 ORTHO05D008620 7.4e-71 271.2 295 48.8
Duzib205G0961 Durio zibethinus HOM05D006861 ORTHO05D008620 1.7e-70 270.0 228 60.1
Glyma.17G153700 Glycine max HOM05D006861 ORTHO05D008620 1.7e-70 270.0 215 61.9
Aqoxy3G02463 Aquilegia oxysepala HOM05D006861 ORTHO05D008620 3.7e-70 268.9 211 62.1
MELO3C013865.2 Cucumis melo HOM05D006861 ORTHO05D008620 4.8e-70 268.5 223 56.5
Lalb_Chr09g0329521 Lupinus albus HOM05D006861 ORTHO05D008620 1.1e-69 267.3 228 58.8
FAN04G0264 Fragaria x ananassa HOM05D006861 ORTHO05D008620 1.8e-69 266.5 211 60.7
ECA233G2855 Erigeron canadensis HOM05D006861 ORTHO05D008620 2.4e-69 266.2 217 59.0
Glyma.05G113600 Glycine max HOM05D006861 ORTHO05D008620 2.4e-69 266.2 215 61.4
Duzib068G0493 Durio zibethinus HOM05D006861 ORTHO05D008620 4.1e-69 265.4 227 58.1
FAN13G1018 Fragaria x ananassa HOM05D006861 ORTHO05D008620 6.9e-69 264.6 209 60.3
FAN08G0129 Fragaria x ananassa HOM05D006861 ORTHO05D008620 4.5e-68 261.9 212 59.0
ClCG10G001830 Citrullus lanatus HOM05D006861 ORTHO05D008620 5.9e-68 261.5 220 56.8
Eucgr.D02180 Eucalyptus grandis HOM05D006861 ORTHO05D008620 5.9e-68 261.5 216 58.8
PSO063G6338 Papaver somniferum HOM05D006861 ORTHO05D008620 5.9e-68 261.5 215 59.1
PSO782G3300 Papaver somniferum HOM05D006861 ORTHO05D008620 5.9e-68 261.5 215 59.1
THA.LOC104807964 Tarenaya hassleriana HOM05D006861 ORTHO05D008620 1.7e-67 260.0 225 57.3
Gorai.008G228100 Gossypium raimondii HOM05D006861 ORTHO05D008620 2.9e-67 259.2 239 56.1
Gohir.D03G170200 Gossypium hirsutum HOM05D006861 ORTHO05D008620 3.8e-67 258.8 225 57.8
Sed0027053 Sechium edule HOM05D006861 ORTHO05D008620 1.4e-66 256.9 220 55.0
Gorai.003G180500 Gossypium raimondii HOM05D006861 ORTHO05D008620 1.9e-66 256.5 225 57.3
Gohir.A03G002100 Gossypium hirsutum HOM05D006861 ORTHO05D008620 4.2e-66 255.4 225 57.3
Carub.0004s1705 Capsella rubella HOM05D006861 ORTHO05D008620 1.2e-65 253.8 222 57.2
Aa31LG9G15370 Aethionema arabicum HOM05D006861 ORTHO05D008620 2.1e-65 253.1 228 57.0
COL.COLO4_17076 Corchorus olitorius HOM05D006861 ORTHO05D008620 6.1e-65 251.5 228 54.8
vmacro14159 Vaccinium macrocarpon HOM05D006861 ORTHO05D008620 8.8e-64 247.7 207 59.4
A05p10410 Brassica napus HOM05D006861 ORTHO05D008620 4.4e-63 245.4 219 56.6
Thhalv10017211m.g Eutrema salsugineum HOM05D006861 ORTHO05D008620 7.4e-63 244.6 229 55.0
Sp4g17580 Schrenkiella parvula HOM05D006861 ORTHO05D008620 9.7e-63 244.2 232 56.0
CARHR129520 Cardamine hirsuta HOM05D006861 ORTHO05D008620 6.3e-62 241.5 228 53.1
AT2G35360 Arabidopsis thaliana HOM05D006861 ORTHO05D008620 1.1e-61 240.7 222 53.2
CDE12G0071 Ceratophyllum demersum HOM05D006861 ORTHO05D008620 1.1e-61 240.7 191 57.6
BraA05t19976Z Brassica rapa HOM05D006861 ORTHO05D008620 4.1e-61 238.8 221 56.6
BcaC02g11640 Brassica carinata HOM05D006861 ORTHO05D008620 9.1e-61 237.7 218 57.3
C04p12840 Brassica napus HOM05D006861 ORTHO05D008620 9.1e-61 237.7 218 57.3
BolC4t22928H Brassica oleracea HOM05D006861 ORTHO05D008620 9.1e-61 237.7 218 57.3
Nn6g33632 Nelumbo nucifera HOM05D006861 ORTHO05D008620 1.5e-60 236.9 277 46.6
HPP92_027725 Vanilla planifolia HOM05D006861 ORTHO05D008620 5.9e-60 235.0 213 54.0
Hma1.2p1_0585F.1_g183580 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 7.7e-60 234.6 212 57.1
TWI60G1564 Tripterygium wilfordii HOM05D006861 ORTHO05D008620 7.7e-60 234.6 228 54.4
AL4G31410 Arabidopsis lyrata HOM05D006861 ORTHO05D008620 1.3e-59 233.8 229 52.4
HPP92_028475 Vanilla planifolia HOM05D006861 ORTHO05D008620 2.2e-59 233.0 213 53.5
BcaB02g09437 Brassica carinata HOM05D006861 ORTHO05D008620 2.9e-59 232.6 219 56.2
AUR62018744 Chenopodium quinoa HOM05D006861 ORTHO05D008620 2.9e-59 232.6 233 50.2
Zm00001eb307090 Zea mays HOM05D006861 ORTHO05D008620 1.9e-58 229.9 217 53.0
Os09g0573100 Oryza sativa ssp. japonica HOM05D006861 ORTHO05D008620 2.5e-58 229.6 219 53.9
SEGI_11276 Sequoiadendron giganteum HOM05D006861 ORTHO05D008620 3.6e-57 225.7 213 50.2
Phvul.003G229300 Phaseolus vulgaris HOM05D006861 ORTHO05D008620 7.0e-53 211.5 157 63.1
Pp3c1_27050 Physcomitrium patens HOM05D006861 ORTHO05D008620 3.6e-49 199.1 213 48.4
Lj2A243G18 Lonicera japonica HOM05D006861 ORTHO05D008620 1.4e-48 197.2 144 63.2
Actinidia09224 Actinidia chinensis HOM05D006861 ORTHO05D008620 2.2e-46 189.9 139 65.5
Dinv25198 Davidia involucrata HOM05D006861 ORTHO05D008620 8.3e-46 188.0 143 63.6
Cpa.g.sc90.59 Carica papaya HOM05D006861 ORTHO05D008620 8.5e-43 177.9 144 59.7
Gohir.A09G039700 Gossypium hirsutum HOM05D006861 ORTHO05D008620 9.4e-42 174.5 144 58.3
Hma1.2p1_2232F.1_g317620 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 3.1e-37 159.5 213 41.8
HanXRQChr16g0517491 Helianthus annuus HOM05D006861 ORTHO05D008620 2.3e-35 153.3 120 60.8
Atru.BG.44.p Acer truncatum HOM05D006861 ORTHO05D008620 1.5e-31 140.6 115 56.5
CBR_g57857 Chara braunii HOM05D006861 ORTHO05D008620 4.1e-21 105.9 191 32.5
Cre12.g533400 Chlamydomonas reinhardtii HOM05D006861 ORTHO05D008620 5.8e-15 85.5 180 32.8
PRCOL_00000188 Prasinoderma coloniale HOM05D006861 ORTHO05D008620 1.3e-11 74.3 102 37.3


User provided reference genes

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