Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000525g0020 Nicotiana tabacum HOM05D007412 ORTHO05D009313 3.8e-69 264.6 125 100.0
Peaxi162Scf01416g00013 Petunia axillaris HOM05D007412 ORTHO05D009313 1.9e-52 209.1 120 86.7
Solyc09g083190.3 Solanum lycopersicum HOM05D007412 ORTHO05D009313 5.5e-52 207.6 119 85.7
PGSC0003DMG400006085 Solanum tuberosum HOM05D007412 ORTHO05D009313 1.6e-51 206.1 119 84.9
Sopen09g032110 Solanum pennellii HOM05D007412 ORTHO05D009313 2.1e-51 205.7 119 84.9
SalBow2G0207 Salvia bowleyana HOM05D007412 ORTHO05D009313 1.3e-48 196.4 119 79.8
HanXRQChr03g0092521 Helianthus annuus HOM05D007412 ORTHO05D009313 2.2e-48 195.7 120 76.7
COL.COLO4_15765 Corchorus olitorius HOM05D007412 ORTHO05D009313 3.7e-48 194.9 119 75.6
Cc00_g20670 Coffea canephora HOM05D007412 ORTHO05D009313 6.3e-48 194.1 119 79.8
GSVIVG01018092001 Vitis vinifera HOM05D007412 ORTHO05D009313 6.3e-48 194.1 119 79.8
Lsat_1_v5_gn_3_124261 Lactuca sativa HOM05D007412 ORTHO05D009313 8.2e-48 193.7 120 77.5
ECA240G0358 Erigeron canadensis HOM05D007412 ORTHO05D009313 3.1e-47 191.8 120 75.8
CSS0011967 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 4.1e-47 191.4 119 75.6
CSS0029364 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 4.1e-47 191.4 119 75.6
MD11G1069500 Malus domestica HOM05D007412 ORTHO05D009313 5.3e-47 191.0 119 75.6
MELO3C006482.2 Cucumis melo HOM05D007412 ORTHO05D009313 7.0e-47 190.7 117 77.8
CsaV3_3G012710 Cucumis sativus L. HOM05D007412 ORTHO05D009313 7.0e-47 190.7 117 77.8
Sed0016634 Sechium edule HOM05D007412 ORTHO05D009313 7.0e-47 190.7 117 77.8
MSTRG.4087 Avicennia marina HOM05D007412 ORTHO05D009313 2.0e-46 189.1 119 77.3
Rhsim04G0195000 Rhododendron simsii HOM05D007412 ORTHO05D009313 2.0e-46 189.1 119 74.8
Dinv44610 Davidia involucrata HOM05D007412 ORTHO05D009313 3.5e-46 188.3 119 77.3
Oeu022316.1 Olea europaea HOM05D007412 ORTHO05D009313 3.5e-46 188.3 119 76.5
EL10Ac6g14279 Beta vulgaris HOM05D007412 ORTHO05D009313 7.7e-46 187.2 119 71.4
Glyma.10G000900 Glycine max HOM05D007412 ORTHO05D009313 1.3e-45 186.4 119 73.1
Dinv14073 Davidia involucrata HOM05D007412 ORTHO05D009313 2.2e-45 185.7 119 76.5
Lj6A653T76 Lonicera japonica HOM05D007412 ORTHO05D009313 2.2e-45 185.7 119 73.9
Thecc.04G243600 Theobroma cacao HOM05D007412 ORTHO05D009313 2.2e-45 185.7 118 74.6
Migut.G00414 Erythranthe guttata HOM05D007412 ORTHO05D009313 2.9e-45 185.3 117 73.5
THA.LOC104826067 Tarenaya hassleriana HOM05D007412 ORTHO05D009313 2.9e-45 185.3 119 73.9
Eucgr.H00220 Eucalyptus grandis HOM05D007412 ORTHO05D009313 3.8e-45 184.9 119 75.6
Prupe.1G026900 Prunus persica HOM05D007412 ORTHO05D009313 5.0e-45 184.5 119 73.1
Nitab4.5_0010243g0010 Nicotiana tabacum HOM05D007412 ORTHO05D009313 6.5e-45 184.1 111 82.0
Cpa.g.sc58.20 Carica papaya HOM05D007412 ORTHO05D009313 8.5e-45 183.7 119 74.8
RcHm_v2.0_Chr4g0389531 Rosa chinensis HOM05D007412 ORTHO05D009313 8.5e-45 183.7 119 73.9
unitig_747.g21682 Utricularia gibba HOM05D002547 ORTHO05D009313 1.1e-44 183.3 119 74.8
Manes.15G035500 Manihot esculenta HOM05D007412 ORTHO05D009313 1.5e-44 183.0 119 73.1
FvH4_4g02220 Fragaria vesca HOM05D007412 ORTHO05D009313 1.9e-44 182.6 119 73.9
FAN12G2712 Fragaria x ananassa HOM05D007412 ORTHO05D009313 1.9e-44 182.6 119 73.9
Ca_12212_v3 Cicer arietinum L. HOM05D007412 ORTHO05D009313 3.2e-44 181.8 119 71.4
Ah.03g138430 Amaranthus hybridus HOM05D007412 ORTHO05D009313 5.5e-44 181.0 119 72.3
vmacro08398 Vaccinium macrocarpon HOM05D007412 ORTHO05D009313 9.4e-44 180.3 120 70.8
FAN17G1959 Fragaria x ananassa HOM05D007412 ORTHO05D009313 1.2e-43 179.9 119 72.3
Gohir.A10G118720 Gossypium hirsutum HOM05D007412 ORTHO05D009313 1.2e-43 179.9 119 70.6
Gorai.011G164700 Gossypium raimondii HOM05D007412 ORTHO05D009313 1.2e-43 179.9 119 70.6
Lj6g0001594 Lotus japonicus HOM05D007412 ORTHO05D009313 1.2e-43 179.9 119 72.3
FAN22G2201 Fragaria x ananassa HOM05D007412 ORTHO05D009313 2.7e-43 178.7 116 73.3
CANSAT78G1677 Cannabis sativa HOM05D007412 ORTHO05D009313 3.6e-43 178.3 119 68.1
Medtr5g042420 Medicago truncatula HOM05D007412 ORTHO05D009313 4.7e-43 177.9 119 70.6
Potri.010G078800 Populus trichocarpa HOM05D007412 ORTHO05D009313 4.7e-43 177.9 119 68.1
Gohir.D10G147600 Gossypium hirsutum HOM05D007412 ORTHO05D009313 8.0e-43 177.2 119 69.7
Duzib212G0542 Durio zibethinus HOM05D007412 ORTHO05D009313 1.4e-42 176.4 117 70.1
VMungo0720G2555 Vigna mungo HOM05D007412 ORTHO05D009313 1.4e-42 176.4 119 73.1
arahy.Tifrunner.gnm1.ann1.7ZK5QJ Arachis hypogaea HOM05D007412 ORTHO05D009313 1.8e-42 176.0 108 73.1
Phvul.007G280100 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 2.3e-42 175.6 119 72.3
Aqoxy5G00362 Aquilegia oxysepala HOM05D007412 ORTHO05D009313 4.0e-42 174.9 113 69.0
BcaB07g30560 Brassica carinata HOM05D007412 ORTHO05D009313 4.0e-42 174.9 119 71.4
BcaC03g16594 Brassica carinata HOM05D007412 ORTHO05D009313 4.0e-42 174.9 119 71.4
A02p27970 Brassica napus HOM05D007412 ORTHO05D009313 4.0e-42 174.9 119 71.4
C02p44160 Brassica napus HOM05D007412 ORTHO05D009313 4.0e-42 174.9 119 71.4
BolC2t10457H Brassica oleracea HOM05D007412 ORTHO05D009313 4.0e-42 174.9 119 71.4
BraA02t07833Z Brassica rapa HOM05D007412 ORTHO05D009313 4.0e-42 174.9 119 71.4
CARHR179730 Cardamine hirsuta HOM05D007412 ORTHO05D009313 4.0e-42 174.9 119 69.7
PSO210G6829 Papaver somniferum HOM05D007412 ORTHO05D009313 4.0e-42 174.9 118 67.8
PSO832G2518 Papaver somniferum HOM05D007412 ORTHO05D009313 4.0e-42 174.9 118 67.8
Psat6g102120 Pisum sativum HOM05D007412 ORTHO05D009313 8.8e-42 173.7 119 67.2
TAR362G0694 Trochodendron aralioides HOM05D007412 ORTHO05D009313 8.8e-42 173.7 117 69.2
Sp2g08560 Schrenkiella parvula HOM05D007412 ORTHO05D009313 1.5e-41 172.9 119 69.7
arahy.Tifrunner.gnm1.ann1.VMTG6G Arachis hypogaea HOM05D007412 ORTHO05D009313 4.4e-41 171.4 114 71.1
Sabra10G0064500 Salix brachista HOM05D007412 ORTHO05D009313 4.4e-41 171.4 119 65.5
AUR62002782 Chenopodium quinoa HOM05D007412 ORTHO05D009313 7.5e-41 170.6 105 77.1
Glyma.19G263800 Glycine max HOM05D007412 ORTHO05D009313 9.8e-41 170.2 110 71.8
AL37U10020 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 1.7e-40 169.5 119 68.1
AL8G16510 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 1.7e-40 169.5 119 68.1
Carub.0008s0489 Capsella rubella HOM05D007412 ORTHO05D009313 2.2e-40 169.1 119 68.1
Thhalv10003269m.g Eutrema salsugineum HOM05D007412 ORTHO05D009313 2.2e-40 169.1 119 66.4
Nn1g02544 Nelumbo nucifera HOM05D007412 ORTHO05D009313 2.2e-40 169.1 119 68.1
AT5G43750 Arabidopsis thaliana HOM05D007412 ORTHO05D009313 6.3e-40 167.5 119 67.2
AUR62014099 Chenopodium quinoa HOM05D007412 ORTHO05D009313 1.1e-39 166.8 105 76.2
Glyma.02G000300 Glycine max HOM05D007412 ORTHO05D009313 1.8e-39 166.0 109 71.6
PGR142G1781 Punica granatum HOM05D007412 ORTHO05D009313 1.8e-39 166.0 119 68.9
CiPaw.01G192500 Carya illinoinensis HOM05D007412 ORTHO05D009313 9.1e-39 163.7 119 67.2
Os01g0929100 Oryza sativa ssp. japonica HOM05D007412 ORTHO05D009313 1.2e-38 163.3 116 65.5
Lalb_Chr01g0020811 Lupinus albus HOM05D007412 ORTHO05D009313 5.9e-38 161.0 118 66.9
MBI11_g15916_MAGBIO Magnolia biondii HOM05D007412 ORTHO05D009313 1.0e-37 160.2 117 63.2
Zm00001eb142440 Zea mays HOM05D007412 ORTHO05D009313 1.3e-37 159.8 116 64.7
ATR0665G092 Amborella trichopoda HOM05D007412 ORTHO05D009313 2.3e-37 159.1 118 60.2
Ciclev10005847m.g Citrus clementina HOM05D007412 ORTHO05D009313 6.5e-37 157.5 109 66.1
QL06p015027 Quercus lobata HOM05D007412 ORTHO05D009313 1.1e-36 156.8 129 61.2
Haze_11268 Corylus avellana HOM05D007412 ORTHO05D009313 3.3e-36 155.2 120 60.8
ClCG05G004710 Citrullus lanatus HOM05D000055 ORTHO05D000057 6.3e-32 141.0 67 91.0
Phvul.006G006300 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 8.3e-32 140.6 89 76.4
CDE06G0695 Ceratophyllum demersum HOM05D007412 ORTHO05D009313 2.4e-31 139.0 105 59.0
DCAR_030707 Daucus carota HOM05D007412 ORTHO05D009313 1.0e-29 133.7 110 59.1
Hund25023 Selenicereus undatus HOM05D007412 ORTHO05D009313 3.0e-26 122.1 79 74.7
SEGI_16394 Sequoiadendron giganteum HOM05D007412 ORTHO05D009313 2.5e-20 102.4 88 56.8
Eucgr.F02062 Eucalyptus grandis HOM05D007412 ORTHO05D009313 6.6e-13 77.8 43 81.4
Actinidia40098 Actinidia chinensis HOM05D007412 ORTHO05D009313 1.6e-11 73.2 96 42.7
Pp3c21_10470 Physcomitrium patens HOM05D007412 ORTHO05D009313 6.0e-06 54.7 79 34.2


User provided reference genes

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