Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000522g0030 Nicotiana tabacum HOM05D005063 ORTHO05D010498 6.7e-81 303.9 147 100.0
Nitab4.5_0012299g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 8.8e-49 197.2 136 74.3
Nitab4.5_0001863g0140 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.1e-48 196.8 141 73.0
Nitab4.5_0002338g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.0e-48 196.1 141 70.9
Nitab4.5_0000924g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.6e-48 195.7 141 72.3
Nitab4.5_0002951g0070 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.8e-47 192.2 136 72.1
Nitab4.5_0007360g0050 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.8e-47 192.2 136 70.6
Nitab4.5_0000890g0200 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.0e-45 186.0 122 74.6
Nitab4.5_0002279g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.0e-45 186.0 136 69.9
Nitab4.5_0019527g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.5e-45 184.9 136 69.9
Nitab4.5_0002661g0060 Nicotiana tabacum HOM05D005063 ORTHO05D000482 6.7e-41 171.0 141 63.1
Nitab4.5_0013596g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 5.7e-40 167.9 136 64.7
Nitab4.5_0005016g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 6.3e-39 164.5 141 63.8
Nitab4.5_0002072g0090 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.1e-38 163.7 134 64.9
Nitab4.5_0002944g0050 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.1e-38 161.8 142 62.7
Nitab4.5_0001173g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.7e-34 148.3 100 75.0
Nitab4.5_0003887g0060 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.1e-30 135.2 112 62.5
Nitab4.5_0000482g0120 Nicotiana tabacum HOM05D005063 ORTHO05D000482 5.3e-30 134.8 141 54.6
Nitab4.5_0001896g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 9.1e-30 134.0 131 55.7
Nitab4.5_0011961g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 8.5e-28 127.5 129 54.3
Nitab4.5_0007137g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.5e-27 126.7 114 62.3
Nitab4.5_0000036g0370 Nicotiana tabacum HOM05D005063 ORTHO05D010498 1.2e-26 123.6 118 59.3
Nitab4.5_0000571g0200 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.0e-25 120.6 134 53.0
Nitab4.5_0000697g0240 Nicotiana tabacum HOM05D005063 ORTHO05D010498 4.0e-25 118.6 125 56.0
Nitab4.5_0002098g0050 Nicotiana tabacum HOM05D005063 ORTHO05D010498 6.8e-25 117.9 124 55.6
Nitab4.5_0000377g0060 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.4e-24 115.2 66 80.3
Nitab4.5_0012202g0030 Nicotiana tabacum HOM05D005063 ORTHO05D010498 1.7e-23 113.2 114 55.3
Nitab4.5_0000102g0280 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.2e-23 112.8 116 53.4
Nitab4.5_0001927g0100 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.2e-23 112.8 66 78.8
Nitab4.5_0001927g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.4e-22 109.4 66 78.8
Nitab4.5_0006001g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 9.1e-22 107.5 61 80.3
Nitab4.5_0004196g0050 Nicotiana tabacum HOM05D005063 ORTHO05D010498 2.0e-21 106.3 146 43.8
Nitab4.5_0006980g0050 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.7e-20 103.2 141 39.0
Nitab4.5_0000477g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.8e-20 102.1 136 47.8
CAN.G1169.9 Capsicum annuum HOM05D005063 ORTHO05D000482 8.6e-20 100.9 119 43.7
PGSC0003DMG400014694 Solanum tuberosum HOM05D005063 ORTHO05D000482 8.6e-20 100.9 114 43.0
Nitab4.5_0000326g0300 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.1e-19 100.5 141 37.6
Nitab4.5_0002160g0110 Nicotiana tabacum HOM05D000713 ORTHO05D000482 1.1e-19 100.5 141 36.9
Solyc06g008150.3 Solanum lycopersicum HOM05D005063 ORTHO05D000482 4.2e-19 98.6 114 42.1
Sopen06g002980 Solanum pennellii HOM05D005063 ORTHO05D000482 4.2e-19 98.6 114 42.1
Nitab4.5_0000831g0100 Nicotiana tabacum HOM05D005063 ORTHO05D010498 1.2e-18 97.1 134 45.5
Nitab4.5_0000008g0750 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.6e-18 96.7 141 43.3
PGSC0003DMG400000031 Solanum tuberosum HOM05D005063 ORTHO05D000482 2.8e-18 95.9 141 38.3
Nitab4.5_0003911g0070 Nicotiana tabacum HOM05D005063 ORTHO05D010498 6.1e-18 94.7 76 65.8
Nitab4.5_0000730g0160 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.4e-17 93.6 134 44.0
Nitab4.5_0003111g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.8e-17 93.2 141 35.5
Solyc01g094420.3 Solanum lycopersicum HOM05D005063 ORTHO05D000482 4.0e-17 92.0 141 38.3
Sopen01g038220 Solanum pennellii HOM05D005063 ORTHO05D000482 1.2e-16 90.5 141 37.6
Nitab4.5_0013676g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.6e-16 89.4 129 46.5
Nitab4.5_0000227g0060 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.4e-14 82.8 95 42.1
Nitab4.5_0006698g0050 Nicotiana tabacum HOM05D005063 ORTHO05D010498 2.4e-14 82.8 132 38.6
Nitab4.5_0000721g0150 Nicotiana tabacum HOM05D006812 ORTHO05D000482 9.2e-14 80.9 135 37.8
Nitab4.5_0001267g0030 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.2e-13 80.5 111 40.5
Nitab4.5_0001308g0070 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.2e-13 80.5 45 84.4
Nitab4.5_0001810g0060 Nicotiana tabacum HOM05D005063 ORTHO05D010498 1.6e-13 80.1 115 44.3
Nitab4.5_0004192g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.0e-12 77.4 109 40.4
Nitab4.5_0007528g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.7e-12 76.6 121 34.7
Nitab4.5_0000829g0120 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.3e-12 76.3 126 38.9
Nitab4.5_0007565g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000482 2.3e-12 76.3 67 44.8
Nitab4.5_0000228g0040 Nicotiana tabacum HOM05D005063 ORTHO05D010498 2.9e-12 75.9 98 48.0
Nitab4.5_0005705g0060 Nicotiana tabacum HOM05D002262 ORTHO05D000482 5.0e-12 75.1 101 38.6
CAN.G644.13 Capsicum annuum HOM05D000022 ORTHO05D000482 6.6e-12 74.7 100 41.0
Nitab4.5_0000487g0040 Nicotiana tabacum HOM05D006812 ORTHO05D000482 8.6e-12 74.3 65 47.7
Nitab4.5_0001663g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 8.6e-12 74.3 129 38.0
Nitab4.5_0009218g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 8.6e-12 74.3 45 77.8
Nitab4.5_0001230g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.1e-11 73.9 67 44.8
Nitab4.5_0006001g0030 Nicotiana tabacum HOM05D005063 ORTHO05D010498 1.5e-11 73.6 46 71.7
Nitab4.5_0000252g0250 Nicotiana tabacum HOM05D006812 ORTHO05D000482 2.5e-11 72.8 141 33.3
CAN.G1344.11 Capsicum annuum HOM05D000679 ORTHO05D000482 3.3e-11 72.4 111 34.2
Nitab4.5_0000021g0950 Nicotiana tabacum HOM05D005063 ORTHO05D010498 3.3e-11 72.4 117 39.3
Nitab4.5_0010313g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 3.3e-11 72.4 136 30.9
Nitab4.5_0014828g0010 Nicotiana tabacum HOM05D005063 ORTHO05D010498 3.3e-11 72.4 41 82.9
Nitab4.5_0003079g0080 Nicotiana tabacum HOM05D005063 ORTHO05D000482 7.3e-11 71.2 130 36.9
Nitab4.5_0005135g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000482 7.3e-11 71.2 65 43.1
Nitab4.5_0000103g0320 Nicotiana tabacum HOM05D005063 ORTHO05D010498 9.5e-11 70.9 46 73.9
Nitab4.5_0000113g0280 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.2e-10 70.5 63 47.6
CAN.G374.2 Capsicum annuum HOM05D005063 ORTHO05D000482 1.6e-10 70.1 90 41.1
Nitab4.5_0009150g0040 Nicotiana tabacum HOM05D006812 ORTHO05D000482 8.0e-10 67.8 64 40.6
Nitab4.5_0002926g0050 Nicotiana tabacum HOM05D005063 ORTHO05D010498 1.0e-09 67.4 41 75.6
Nitab4.5_0008534g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.0e-09 67.4 38 81.6
Nitab4.5_0000649g0110 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.4e-09 67.0 64 42.2
Nitab4.5_0002806g0010 Nicotiana tabacum HOM05D005063 ORTHO05D005463 2.3e-09 66.2 129 35.7
Nitab4.5_0000576g0030 Nicotiana tabacum HOM05D006812 ORTHO05D000482 5.2e-09 65.1 115 30.4
Nitab4.5_0000584g0060 Nicotiana tabacum HOM05D005063 ORTHO05D000482 5.2e-09 65.1 129 36.4
PGSC0003DMG400009651 Solanum tuberosum HOM05D002262 ORTHO05D000482 8.9e-09 64.3 125 32.0
Nitab4.5_0000498g0110 Nicotiana tabacum HOM05D005063 ORTHO05D010498 1.2e-08 63.9 46 65.2
Nitab4.5_0000022g0130 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.0e-08 63.2 65 44.6
Nitab4.5_0001530g0130 Nicotiana tabacum HOM05D005063 ORTHO05D010498 2.6e-08 62.8 64 53.1
PGSC0003DMG400019312 Solanum tuberosum HOM05D000679 ORTHO05D000482 3.4e-08 62.4 122 27.9
Nitab4.5_0002353g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000482 4.4e-08 62.0 149 26.8
Nitab4.5_0003911g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.4e-08 62.0 35 80.0
CAN.G1862.3 Capsicum annuum HOM05D000361 ORTHO05D000137 5.8e-08 61.6 46 58.7
Nitab4.5_0000569g0060 Nicotiana tabacum HOM05D006812 ORTHO05D000482 5.8e-08 61.6 67 35.8
Nitab4.5_0002951g0060 Nicotiana tabacum HOM05D002262 ORTHO05D000482 5.8e-08 61.6 124 33.9
Nitab4.5_0004958g0040 Nicotiana tabacum HOM05D006812 ORTHO05D000482 5.8e-08 61.6 111 30.6
CAN.G1469.2 Capsicum annuum HOM05D002262 ORTHO05D000137 9.8e-08 60.8 53 50.9
CANSAT25G1620 Cannabis sativa HOM05D008721 ORTHO05D000482 1.3e-07 60.5 170 27.6
Nitab4.5_0003619g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.3e-07 60.5 121 31.4
Nitab4.5_0000306g0070 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.7e-07 60.1 74 35.1
Nitab4.5_0002848g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.7e-07 60.1 53 49.1
Nitab4.5_0001473g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.2e-07 59.7 79 34.2
Solyc10g150130.1 Solanum lycopersicum HOM05D002262 ORTHO05D000482 2.2e-07 59.7 102 29.4
CANSAT11G2576 Cannabis sativa HOM05D008721 ORTHO05D000482 2.9e-07 59.3 132 31.1
CANSAT80G1500 Cannabis sativa HOM05D008721 ORTHO05D000482 3.7e-07 58.9 132 31.1
CAN.G1077.11 Capsicum annuum HOM05D000679 ORTHO05D000137 3.7e-07 58.9 125 30.4
Nitab4.5_0001131g0080 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.7e-07 58.9 53 47.2
Nitab4.5_0004040g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.7e-07 58.9 53 47.2
Nitab4.5_0004159g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.7e-07 58.9 53 47.2
Nitab4.5_0006446g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.7e-07 58.9 53 47.2
Nitab4.5_0007069g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.7e-07 58.9 53 47.2
Nitab4.5_0013791g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.7e-07 58.9 53 47.2
Solyc08g065193.1 Solanum lycopersicum HOM05D002262 ORTHO05D000482 3.7e-07 58.9 102 29.4
Nitab4.5_0002750g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 4.9e-07 58.5 149 25.5
Nitab4.5_0006099g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000482 4.9e-07 58.5 121 28.9
ATR0441G001 Amborella trichopoda HOM05D008721 ORTHO05D000137 6.4e-07 58.2 156 28.8
CANSAT01G1167 Cannabis sativa HOM05D008721 ORTHO05D000482 6.4e-07 58.2 156 28.8
CANSAT01G1840 Cannabis sativa HOM05D008721 ORTHO05D000482 6.4e-07 58.2 156 28.8
CANSAT35G0566 Cannabis sativa HOM05D008721 ORTHO05D000482 6.4e-07 58.2 156 28.8
Nitab4.5_0001082g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 6.4e-07 58.2 53 47.2
Nitab4.5_0013466g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 6.4e-07 58.2 53 43.4
Solyc10g050777.1 Solanum lycopersicum HOM05D009268 ORTHO05D011733 8.3e-07 57.8 125 27.2
Nitab4.5_0002352g0090 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.1e-06 57.4 53 43.4
Sopen07g022050 Solanum pennellii HOM05D000679 ORTHO05D000482 1.1e-06 57.4 156 26.3
Sopen09g026450 Solanum pennellii HOM05D000679 ORTHO05D000137 1.1e-06 57.4 115 28.7
Nitab4.5_0004770g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.4e-06 57.0 53 45.3
Nitab4.5_0009286g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.4e-06 57.0 53 45.3
Nitab4.5_0011458g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.4e-06 57.0 53 45.3
CANSAT54G1171 Cannabis sativa HOM05D008721 ORTHO05D000482 1.9e-06 56.6 132 30.3
Nitab4.5_0004147g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.9e-06 56.6 53 43.4
Nitab4.5_0004357g0020 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.9e-06 56.6 122 29.5
Solyc11g061985.1 Solanum lycopersicum HOM05D002262 ORTHO05D000482 1.9e-06 56.6 121 28.1
Nitab4.5_0000832g0080 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.4e-06 56.2 53 41.5
Nitab4.5_0011754g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.4e-06 56.2 53 45.3
Sopen11g024470 Solanum pennellii HOM05D000679 ORTHO05D000482 2.4e-06 56.2 149 25.5
Nitab4.5_0000584g0100 Nicotiana tabacum HOM05D005063 ORTHO05D010498 3.2e-06 55.8 43 62.8
Nitab4.5_0000586g0100 Nicotiana tabacum HOM05D006812 ORTHO05D000482 3.2e-06 55.8 46 47.8
Nitab4.5_0001057g0210 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.2e-06 55.8 53 43.4
Nitab4.5_0002297g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.2e-06 55.8 48 60.4
Nitab4.5_0004118g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.2e-06 55.8 31 74.2
Nitab4.5_0013274g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.2e-06 55.8 53 43.4
Nitab4.5_0001725g0070 Nicotiana tabacum HOM05D006812 ORTHO05D000482 4.1e-06 55.5 45 46.7
Nitab4.5_0007686g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000482 4.1e-06 55.5 147 25.9
CAN.G971.1 Capsicum annuum HOM05D000679 ORTHO05D000137 5.4e-06 55.1 124 28.2
Nitab4.5_0013466g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000482 5.4e-06 55.1 53 43.4
Nitab4.5_0001552g0110 Nicotiana tabacum HOM05D005063 ORTHO05D010498 7.0e-06 54.7 31 74.2
Nitab4.5_0003021g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000482 7.0e-06 54.7 53 43.4
Nitab4.5_0004238g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000482 7.0e-06 54.7 45 48.9
Sopen01g053420 Solanum pennellii HOM05D000679 ORTHO05D014266 7.0e-06 54.7 67 32.8
CAN.G413.23 Capsicum annuum HOM05D000679 ORTHO05D000137 9.2e-06 54.3 140 25.7
Nitab4.5_0000839g0190 Nicotiana tabacum HOM05D002262 ORTHO05D000482 9.2e-06 54.3 53 43.4
Nitab4.5_0002655g0110 Nicotiana tabacum HOM05D002262 ORTHO05D000482 9.2e-06 54.3 53 41.5
Nitab4.5_0005869g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000482 9.2e-06 54.3 125 24.0
Nitab4.5_0007303g0070 Nicotiana tabacum HOM05D005063 ORTHO05D000482 9.2e-06 54.3 31 74.2
Solyc06g050740.1 Solanum lycopersicum HOM05D000679 ORTHO05D000482 9.2e-06 54.3 115 27.8


User provided reference genes

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