Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000521g0060 Nicotiana tabacum HOM05D005857 ORTHO05D007193 1.3e-34 149.1 72 100.0
Nitab4.5_0006159g0060 Nicotiana tabacum HOM05D005857 ORTHO05D007193 1.3e-32 142.5 72 94.4
Solyc01g102830.3 Solanum lycopersicum HOM05D005857 ORTHO05D007193 1.1e-31 139.4 72 91.7
Sopen01g045230 Solanum pennellii HOM05D005857 ORTHO05D007193 1.1e-31 139.4 72 91.7
PGSC0003DMG400018258 Solanum tuberosum HOM05D005857 ORTHO05D007193 3.1e-31 137.9 72 90.3
CAN.G1379.7 Capsicum annuum HOM05D005857 ORTHO05D007193 3.8e-29 131.0 72 88.9
Manes.14G164233 Manihot esculenta HOM05D005857 ORTHO05D007193 9.6e-25 116.3 72 75.0
Peaxi162Scf00194g01021 Petunia axillaris HOM05D005857 ORTHO05D007193 1.1e-23 112.8 58 86.2
Lsat_1_v5_gn_9_83180 Lactuca sativa HOM05D005857 ORTHO05D007193 3.1e-23 111.3 73 75.3
Manes.06G013700 Manihot esculenta HOM05D005857 ORTHO05D007193 4.0e-23 110.9 72 70.8
Sc03g0005520 Simmondsia chinensis HOM05D005857 ORTHO05D007193 4.0e-23 110.9 64 81.2
CSS0043387 Camellia sinensis var. sinensis HOM05D005857 ORTHO05D007193 5.3e-23 110.5 61 82.0
Potri.004G229900 Populus trichocarpa HOM05D005857 ORTHO05D007193 5.3e-23 110.5 72 73.6
CSS0006636 Camellia sinensis var. sinensis HOM05D005857 ORTHO05D007193 1.5e-22 109.0 61 80.3
SalBow1G1563 Salvia bowleyana HOM05D005857 ORTHO05D007193 1.5e-22 109.0 70 75.7
vmacro01623 Vaccinium macrocarpon HOM05D005857 ORTHO05D007193 2.0e-22 108.6 61 78.7
DCAR_001733 Daucus carota HOM05D005857 ORTHO05D007193 2.6e-22 108.2 72 69.4
CANSAT01G1822 Cannabis sativa HOM05D005857 ORTHO05D007193 5.8e-22 107.1 73 71.2
COL.COLO4_31107 Corchorus olitorius HOM05D005857 ORTHO05D007193 5.8e-22 107.1 72 70.8
SGA_v2.0_scaffold100G29556 Striga asiatica HOM05D001195 ORTHO05D001138 5.8e-22 107.1 71 74.6
HanXRQChr11g0343801 Helianthus annuus HOM05D005857 ORTHO05D007193 1.0e-21 106.3 65 76.9
PSO210G5758 Papaver somniferum HOM05D005857 ORTHO05D007193 3.8e-21 104.4 72 69.4
TWI23G0165 Tripterygium wilfordii HOM05D005857 ORTHO05D007193 3.8e-21 104.4 70 74.3
Oeu010607.1 Olea europaea HOM05D005857 ORTHO05D007193 5.0e-21 104.0 73 71.2
FvH4_5g27520 Fragaria vesca HOM05D005857 ORTHO05D007193 6.5e-21 103.6 67 70.1
PSO447G0367 Papaver somniferum HOM05D005857 ORTHO05D007193 6.5e-21 103.6 72 68.1
TWI59G0768 Tripterygium wilfordii HOM05D005857 ORTHO05D007193 8.4e-21 103.2 73 71.2
Cc08_g11670 Coffea canephora HOM05D005857 ORTHO05D007193 1.1e-20 102.8 76 68.4
TAR628G1233 Trochodendron aralioides HOM05D005857 ORTHO05D007193 1.1e-20 102.8 72 69.4
Nitab4.5_0001085g0140 Nicotiana tabacum HOM05D005857 ORTHO05D007193 1.4e-20 102.4 52 86.5
Oeu000158.1 Olea europaea HOM05D005857 ORTHO05D007193 1.4e-20 102.4 62 77.4
QL02p103650 Quercus lobata HOM05D005857 ORTHO05D007193 1.4e-20 102.4 71 69.0
BcaB03g13096 Brassica carinata HOM05D005857 ORTHO05D007193 1.9e-20 102.1 63 73.0
BcaB07g30330 Brassica carinata HOM05D005857 ORTHO05D007193 4.2e-20 100.9 63 71.4
CsaV3_5G027560 Cucumis sativus L. HOM05D005857 ORTHO05D007193 4.2e-20 100.9 72 68.1
RcHm_v2.0_Chr7g0218891 Rosa chinensis HOM05D005857 ORTHO05D007193 4.2e-20 100.9 67 68.7
Thecc.06G020800 Theobroma cacao HOM05D005857 ORTHO05D007193 5.5e-20 100.5 72 70.8
ATR1089G102 Amborella trichopoda HOM05D005857 ORTHO05D007193 7.1e-20 100.1 57 77.2
AL1G26340 Arabidopsis lyrata HOM05D005857 ORTHO05D007193 7.1e-20 100.1 73 65.8
AT1G14450 Arabidopsis thaliana HOM05D005857 ORTHO05D007193 7.1e-20 100.1 73 65.8
A06p10470 Brassica napus HOM05D005857 ORTHO05D007193 7.1e-20 100.1 63 71.4
C05p12250 Brassica napus HOM05D005857 ORTHO05D007193 7.1e-20 100.1 63 71.4
BraA06t24227Z Brassica rapa HOM05D005857 ORTHO05D007193 7.1e-20 100.1 63 71.4
Thhalv10005238m.g Eutrema salsugineum HOM05D005857 ORTHO05D007193 7.1e-20 100.1 72 63.9
BcaC03g17146 Brassica carinata HOM05D005857 ORTHO05D007193 9.3e-20 99.8 72 65.3
BcaC05g25348 Brassica carinata HOM05D005857 ORTHO05D007193 9.3e-20 99.8 70 65.7
Cpa.g.sc34.126 Carica papaya HOM05D005857 ORTHO05D007193 9.3e-20 99.8 69 65.2
Gohir.A05G160000 Gossypium hirsutum HOM05D005857 ORTHO05D007193 9.3e-20 99.8 74 66.2
Gohir.D05G162700 Gossypium hirsutum HOM05D005857 ORTHO05D007193 9.3e-20 99.8 74 66.2
Gorai.009G167700 Gossypium raimondii HOM05D005857 ORTHO05D007193 9.3e-20 99.8 74 66.2
Nitab4.5_0008987g0050 Nicotiana tabacum HOM05D005857 ORTHO05D007193 9.3e-20 99.8 56 82.1
C02p50660 Brassica napus HOM05D005857 ORTHO05D007193 1.6e-19 99.0 63 69.8
BolC2t11149H Brassica oleracea HOM05D005857 ORTHO05D007193 1.6e-19 99.0 63 69.8
BraA02t08316Z Brassica rapa HOM05D005857 ORTHO05D007193 1.6e-19 99.0 63 69.8
Carub.0005s0154 Capsella rubella HOM05D005857 ORTHO05D007193 1.6e-19 99.0 63 69.8
CARHR145070 Cardamine hirsuta HOM05D005857 ORTHO05D007193 1.6e-19 99.0 63 69.8
PGR042G3007 Punica granatum HOM05D005857 ORTHO05D007193 1.6e-19 99.0 74 66.2
Duzib133G0295 Durio zibethinus HOM05D005857 ORTHO05D007193 2.1e-19 98.6 75 65.3
AT2G02510 Arabidopsis thaliana HOM05D005857 ORTHO05D007193 2.7e-19 98.2 63 68.3
BolC5t29979H Brassica oleracea HOM05D005857 ORTHO05D007193 2.7e-19 98.2 73 64.4
HanXRQChr10g0285581 Helianthus annuus HOM05D005857 ORTHO05D007193 3.5e-19 97.8 65 72.3
Prupe.1G586500 Prunus persica HOM05D005857 ORTHO05D007193 3.5e-19 97.8 61 70.5
Sp1g12820 Schrenkiella parvula HOM05D005857 ORTHO05D007193 3.5e-19 97.8 73 64.4
BcaB08g34397 Brassica carinata HOM05D005857 ORTHO05D007193 4.6e-19 97.4 73 63.0
Sp2g13760 Schrenkiella parvula HOM05D005857 ORTHO05D007193 4.6e-19 97.4 72 62.5
THA.LOC104801779 Tarenaya hassleriana HOM05D005857 ORTHO05D007193 4.6e-19 97.4 70 61.4
Aqoxy5G01841 Aquilegia oxysepala HOM05D005857 ORTHO05D007193 6.1e-19 97.1 73 67.1
C08p16740 Brassica napus HOM05D005857 ORTHO05D007193 6.1e-19 97.1 63 69.8
Carub.0001s1416 Capsella rubella HOM05D005857 ORTHO05D007193 6.1e-19 97.1 73 63.0
Migut.B00707 Erythranthe guttata HOM05D005857 ORTHO05D007193 6.1e-19 97.1 66 71.2
Aa31LG2G7600 Aethionema arabicum HOM05D005857 ORTHO05D007193 7.9e-19 96.7 62 67.7
AL5G11780 Arabidopsis lyrata HOM05D005857 ORTHO05D007193 7.9e-19 96.7 63 66.7
Thhalv10009257m.g Eutrema salsugineum HOM05D005857 ORTHO05D007193 7.9e-19 96.7 71 64.8
CARHR014900 Cardamine hirsuta HOM05D005857 ORTHO05D007193 1.0e-18 96.3 71 64.8
CiPaw.06G177300 Carya illinoinensis HOM05D005857 ORTHO05D007193 1.3e-18 95.9 73 67.1
MBI03_g21081_MAGBIO Magnolia biondii HOM05D005857 ORTHO05D007193 1.3e-18 95.9 53 79.2
Sed0006374 Sechium edule HOM05D005857 ORTHO05D007193 1.8e-18 95.5 61 67.2
FAN18G0749 Fragaria x ananassa HOM05D005857 ORTHO05D007193 2.3e-18 95.1 62 67.7
Aa31LG1G600 Aethionema arabicum HOM05D005857 ORTHO05D007193 3.9e-18 94.4 72 63.9
MD08G1249300 Malus domestica HOM05D005857 ORTHO05D007193 3.9e-18 94.4 57 71.9
FAN04G0073 Fragaria x ananassa HOM05D005857 ORTHO05D007193 8.7e-18 93.2 60 68.3
ECA236G3879 Erigeron canadensis HOM05D005857 ORTHO05D007193 1.1e-17 92.8 69 65.2
AUR62040136 Chenopodium quinoa HOM05D005857 ORTHO05D007193 1.5e-17 92.4 66 65.2
MD15G1444100 Malus domestica HOM05D005857 ORTHO05D007193 1.5e-17 92.4 76 59.2
THA.LOC104805131 Tarenaya hassleriana HOM05D005857 ORTHO05D007193 2.5e-17 91.7 70 55.7
Cfa004425 Carpinus fangiana HOM05D005857 ORTHO05D007193 3.3e-17 91.3 74 63.5
Haze_09965 Corylus avellana HOM05D005857 ORTHO05D007193 3.3e-17 91.3 74 63.5
CiPaw.05G001000 Carya illinoinensis HOM05D005857 ORTHO05D007193 4.3e-17 90.9 74 66.2
AUR62032483 Chenopodium quinoa HOM05D005857 ORTHO05D007193 4.3e-17 90.9 66 65.2
Zm00001eb244200 Zea mays HOM05D005857 ORTHO05D007193 4.3e-17 90.9 58 69.0
Os02g0564200 Oryza sativa ssp. japonica HOM05D005857 ORTHO05D007193 5.7e-17 90.5 58 67.2
Lj4g0009904 Lotus japonicus HOM05D005857 ORTHO05D007193 1.3e-16 89.4 54 74.1
Nitab4.5_0004030g0040 Nicotiana tabacum HOM05D005857 ORTHO05D007193 1.3e-16 89.4 53 77.4
Lalb_Chr12g0195891 Lupinus albus HOM05D005857 ORTHO05D007193 1.6e-16 89.0 68 66.2
SHI07423 Sapria himalayana HOM05D005857 ORTHO05D007193 2.2e-16 88.6 54 75.9
FAN08G0400 Fragaria x ananassa HOM05D005857 ORTHO05D007193 2.8e-16 88.2 47 80.9
Glyma.17G002300 Glycine max HOM05D005857 ORTHO05D007193 2.8e-16 88.2 60 71.7
Lsat_1_v5_gn_9_124880 Lactuca sativa HOM05D005857 ORTHO05D007193 2.8e-16 88.2 47 83.0
FAN13G1483 Fragaria x ananassa HOM05D005857 ORTHO05D007193 4.8e-16 87.4 60 65.0
TPR.G6546 Trifolium pratense HOM05D005857 ORTHO05D007193 1.8e-15 85.5 58 69.0
Psat0s2555g0160 Pisum sativum HOM05D005857 ORTHO05D007193 2.4e-15 85.1 62 64.5
Atru.chr6.134 Acer truncatum HOM05D005857 ORTHO05D007193 4.1e-15 84.3 70 58.6
Atru.chr6.187 Acer truncatum HOM05D005857 ORTHO05D007193 4.1e-15 84.3 70 58.6
Ciclev10003046m.g Citrus clementina HOM05D005857 ORTHO05D007193 4.1e-15 84.3 74 60.8
MD11G1276400 Malus domestica HOM05D005857 ORTHO05D007193 5.3e-15 84.0 69 59.4
Medtr4g134550 Medicago truncatula HOM05D005857 ORTHO05D007193 5.3e-15 84.0 54 66.7
BcaC07g41575 Brassica carinata HOM05D005857 ORTHO05D007193 6.9e-15 83.6 73 60.3
Phvul.003G091000 Phaseolus vulgaris HOM05D005857 ORTHO05D007193 6.9e-15 83.6 62 59.7
Actinidia11730 Actinidia chinensis HOM05D005857 ORTHO05D007193 9.0e-15 83.2 45 77.8
Ca_13524_v3 Cicer arietinum L. HOM05D005857 ORTHO05D007193 1.2e-14 82.8 62 61.3
Ciclev10003044m.g Citrus clementina HOM05D005857 ORTHO05D007193 1.2e-14 82.8 74 59.5
unitig_8.g2962 Utricularia gibba HOM05D005857 ORTHO05D007193 1.5e-14 82.4 47 74.5
EL10Ac3g06399 Beta vulgaris HOM05D005857 ORTHO05D007193 2.2e-13 78.6 54 61.1
Psat4g149960 Pisum sativum HOM05D005857 ORTHO05D007193 1.9e-12 75.5 54 63.0
A02p32930 Brassica napus HOM05D005857 ORTHO05D007193 4.2e-12 74.3 62 58.1
BolC8t49293H Brassica oleracea HOM05D005857 ORTHO05D007193 9.4e-12 73.2 37 83.8
Zm00001eb182520 Zea mays HOM05D005857 ORTHO05D007193 6.1e-11 70.5 62 51.6
Zm00001eb353890 Zea mays HOM05D005857 ORTHO05D007193 2.3e-10 68.6 45 62.2
Zm00001eb203220 Zea mays HOM05D005857 ORTHO05D007193 4.3e-09 64.3 46 60.9
GSVIVG01023132001 Vitis vinifera HOM05D005857 ORTHO05D007193 1.3e-08 62.8 30 86.7
Zm00001eb203730 Zea mays HOM05D005857 ORTHO05D007193 1.7e-08 62.4 45 60.0
Pp3c9_5250 Physcomitrium patens HOM05D005857 ORTHO05D007193 1.4e-07 59.3 54 50.0
Nitab4.5_0003439g0030 Nicotiana tabacum HOM05D005857 ORTHO05D007193 3.1e-07 58.2 45 62.2
Mapoly0052s0008 Marchantia polymorpha HOM05D005857 ORTHO05D007193 4.5e-06 54.3 52 50.0


User provided reference genes

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