Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000520g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.7e-158 563.1 399 100.0
Nitab4.5_0002604g0070 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.2e-87 327.8 352 69.0
Nitab4.5_0002437g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 9.9e-87 324.7 332 73.5
Nitab4.5_0006834g0020 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.9e-85 320.5 368 67.9
Nitab4.5_0001070g0140 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.0e-83 314.7 319 73.4
Nitab4.5_0001427g0050 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.0e-79 300.4 247 76.9
Nitab4.5_0026777g0010 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.1e-77 294.7 249 86.3
Nitab4.5_0004968g0020 Nicotiana tabacum HOM05D008024 ORTHO05D010405 5.4e-77 292.4 249 85.1
Nitab4.5_0005327g0020 Nicotiana tabacum HOM05D008024 ORTHO05D010405 4.6e-76 289.3 247 83.4
Nitab4.5_0001333g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.0e-75 288.1 355 67.6
Nitab4.5_0002210g0090 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.5e-74 284.3 245 82.0
Nitab4.5_0000127g0130 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.1e-73 280.4 245 65.7
Nitab4.5_0000686g0200 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.1e-69 268.1 247 79.4
Nitab4.5_0009338g0010 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.3e-65 254.6 209 67.9
Nitab4.5_0001507g0110 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.2e-62 243.8 247 68.8
Nitab4.5_0004469g0110 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.2e-62 243.8 130 92.3
Nitab4.5_0011075g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.2e-62 243.8 130 92.3
Nitab4.5_0002789g0060 Nicotiana tabacum HOM05D008024 ORTHO05D010405 3.8e-62 243.0 130 93.1
Nitab4.5_0000197g0140 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.7e-60 236.9 130 91.5
Nitab4.5_0002710g0040 Nicotiana tabacum HOM05D008024 ORTHO05D010405 3.5e-60 236.5 130 90.0
Nitab4.5_0006018g0070 Nicotiana tabacum HOM05D008024 ORTHO05D010405 4.6e-60 236.1 327 62.4
Nitab4.5_0005160g0090 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.0e-59 235.0 130 90.8
Nitab4.5_0013419g0020 Nicotiana tabacum HOM05D008024 ORTHO05D010405 4.2e-53 213.0 244 52.0
Nitab4.5_0003987g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.8e-51 207.6 122 82.8
Nitab4.5_0001650g0090 Nicotiana tabacum HOM05D008024 ORTHO05D010405 3.7e-49 199.9 204 71.1
Nitab4.5_0000023g0750 Nicotiana tabacum HOM05D008024 ORTHO05D010405 6.3e-41 172.6 245 44.9
Nitab4.5_0003780g0140 Nicotiana tabacum HOM05D008024 ORTHO05D010405 8.2e-41 172.2 255 55.7
Nitab4.5_0009681g0040 Nicotiana tabacum HOM05D008024 ORTHO05D010405 3.1e-40 170.2 255 54.5
Nitab4.5_0000144g0100 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.2e-36 158.3 185 68.1
Nitab4.5_0000256g0010 Nicotiana tabacum HOM05D008024 ORTHO05D010405 4.8e-33 146.4 105 66.7
Nitab4.5_0001162g0020 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.1e-32 145.2 197 57.9
Nitab4.5_0003998g0070 Nicotiana tabacum HOM05D008024 ORTHO05D010405 4.5e-31 139.8 230 50.4
Nitab4.5_0000485g0020 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.3e-30 138.3 87 78.2
Nitab4.5_0004704g0070 Nicotiana tabacum HOM05D008024 ORTHO05D010405 5.0e-30 136.3 222 41.0
Nitab4.5_0002330g0050 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.8e-27 127.9 185 61.6
Nitab4.5_0008256g0010 Nicotiana tabacum HOM05D008024 ORTHO05D010405 5.2e-27 126.3 222 48.6
Nitab4.5_0007824g0010 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.5e-26 124.8 76 81.6
Nitab4.5_0013343g0010 Nicotiana tabacum HOM05D008024 ORTHO05D010405 3.3e-26 123.6 68 89.7
Nitab4.5_0001474g0100 Nicotiana tabacum HOM05D008024 ORTHO05D010405 9.1e-24 115.5 179 64.2
Nitab4.5_0004758g0050 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.2e-22 110.9 186 46.8
Nitab4.5_0002145g0040 Nicotiana tabacum HOM05D008024 ORTHO05D010405 5.0e-22 109.8 68 80.9
Nitab4.5_0000620g0250 Nicotiana tabacum HOM05D008024 ORTHO05D010405 8.5e-22 109.0 68 80.9
Nitab4.5_0000909g0060 Nicotiana tabacum HOM05D008024 ORTHO05D010405 8.8e-19 99.0 71 81.7
Nitab4.5_0001772g0120 Nicotiana tabacum HOM05D008024 ORTHO05D010405 8.8e-19 99.0 87 59.8
Nitab4.5_0002628g0070 Nicotiana tabacum HOM05D008024 ORTHO05D010405 7.5e-18 95.9 219 36.5
Nitab4.5_0004340g0090 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.3e-17 95.1 182 41.8
Nitab4.5_0007325g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.2e-17 94.4 84 60.7
Nitab4.5_0000779g0040 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.8e-16 91.3 193 35.2
Nitab4.5_0004670g0060 Nicotiana tabacum HOM05D008024 ORTHO05D010405 4.1e-16 90.1 183 36.1
Nitab4.5_0000309g0260 Nicotiana tabacum HOM05D008024 ORTHO05D010405 4.5e-15 86.7 57 75.4
Nitab4.5_0002710g0060 Nicotiana tabacum HOM05D008024 ORTHO05D010405 4.5e-15 86.7 50 88.0
Nitab4.5_0000485g0040 Nicotiana tabacum HOM05D008024 ORTHO05D010405 5.9e-15 86.3 50 80.0
Nitab4.5_0001151g0120 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.2e-14 84.3 68 63.2
Nitab4.5_0009386g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.1e-13 82.0 177 42.4
Nitab4.5_0004505g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 3.6e-12 77.0 121 38.8
Nitab4.5_0004779g0030 Nicotiana tabacum HOM05D008024 ORTHO05D010405 1.0e-11 75.5 68 60.3
Nitab4.5_0000216g0350 Nicotiana tabacum HOM05D008024 ORTHO05D010405 9.8e-10 68.9 68 54.4
Nitab4.5_0006241g0050 Nicotiana tabacum HOM05D008024 ORTHO05D010405 2.8e-09 67.4 120 40.0
PGSC0003DMG400001699 Solanum tuberosum HOM05D004064 ORTHO05D009909 6.3e-09 66.2 301 35.5
PGSC0003DMG400043109 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.1e-08 65.5 106 40.6
PGSC0003DMG400012698 Solanum tuberosum HOM05D004064 ORTHO05D009909 4.1e-08 63.5 270 36.7
PGSC0003DMG400045086 Solanum tuberosum HOM05D004064 ORTHO05D009909 9.2e-08 62.4 263 27.4
CAN.G127.19 Capsicum annuum HOM05D004064 ORTHO05D009909 1.2e-07 62.0 106 39.6
Sopen01g016940 Solanum pennellii HOM05D004064 ORTHO05D009909 2.7e-07 60.8 106 37.7
Peaxi162Scf00288g01114 Petunia axillaris HOM05D006921 ORTHO05D009185 3.5e-07 60.5 94 34.0
Sopen05g012050 Solanum pennellii HOM05D000017 ORTHO05D000013 3.5e-07 60.5 95 37.9
Sopen05g012450 Solanum pennellii HOM05D000017 ORTHO05D009561 3.5e-07 60.5 95 37.9
Sopen08g001370 Solanum pennellii HOM05D000017 ORTHO05D000013 3.5e-07 60.5 95 37.9
Sopen11g013980 Solanum pennellii HOM05D000017 ORTHO05D009561 3.5e-07 60.5 95 37.9
Peaxi162Scf00086g00199 Petunia axillaris HOM05D006921 ORTHO05D009185 4.5e-07 60.1 95 34.7
Peaxi162Scf00136g01915 Petunia axillaris HOM05D006921 ORTHO05D009185 4.5e-07 60.1 95 34.7
Sopen12g005860 Solanum pennellii HOM05D000017 ORTHO05D000013 4.5e-07 60.1 95 37.9
Nitab4.5_0001926g0090 Nicotiana tabacum HOM05D008024 ORTHO05D010405 5.9e-07 59.7 47 63.8
Peaxi162Scf00062g00106 Petunia axillaris HOM05D006921 ORTHO05D009185 7.7e-07 59.3 100 33.0
Peaxi162Scf00591g00515 Petunia axillaris HOM05D006921 ORTHO05D009185 7.7e-07 59.3 94 34.0
Sopen03g024100 Solanum pennellii HOM05D004064 ORTHO05D009909 1.0e-06 58.9 95 35.8
Sopen12g026480 Solanum pennellii HOM05D000017 ORTHO05D009561 1.7e-06 58.2 97 37.1
Nitab4.5_0007771g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.9e-06 57.4 97 34.0
Peaxi162Scf00087g00098 Petunia axillaris HOM05D006921 ORTHO05D009185 2.9e-06 57.4 94 31.9
Sopen06g017430 Solanum pennellii HOM05D000017 ORTHO05D000013 3.8e-06 57.0 96 37.5
Sopen04g024150 Solanum pennellii HOM05D004064 ORTHO05D009909 6.6e-06 56.2 97 38.1


User provided reference genes

Program Settings