Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000516g0090 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.3e-131 474.2 496 100.0
Nitab4.5_0000516g0060 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.0e-56 225.3 125 92.0
Nitab4.5_0001375g0150 Nicotiana tabacum HOM05D007160 ORTHO05D005331 9.5e-55 218.8 124 90.3
Nitab4.5_0001375g0120 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.7e-51 208.0 125 85.6
Nitab4.5_0001375g0140 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.7e-51 208.0 124 87.9
Nitab4.5_0000516g0070 Nicotiana tabacum HOM05D007160 ORTHO05D005331 8.3e-51 205.7 125 84.8
Peaxi162Scf00031g00084 Petunia axillaris HOM05D007160 ORTHO05D005331 4.4e-28 130.2 122 60.7
Nitab4.5_0001955g0170 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.0e-24 119.0 121 59.5
Nitab4.5_0004359g0050 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.0e-24 119.0 121 60.3
Peaxi162Scf01018g00012 Petunia axillaris HOM05D007160 ORTHO05D005331 2.3e-24 117.9 501 36.3
CAN.G529.50 Capsicum annuum HOM05D007160 ORTHO05D005331 1.5e-23 115.2 116 57.8
PGSC0003DMG400031775 Solanum tuberosum HOM05D007160 ORTHO05D005331 1.3e-22 112.1 125 52.0
Sopen02g022600 Solanum pennellii HOM05D007160 ORTHO05D005331 3.6e-22 110.5 126 51.6
PGSC0003DMG400022807 Solanum tuberosum HOM05D007160 ORTHO05D005331 3.6e-22 110.5 165 44.8
Solyc02g077710.1 Solanum lycopersicum HOM05D007160 ORTHO05D005331 4.8e-22 110.2 126 51.6
Cc02_g13790 Coffea canephora HOM05D007160 ORTHO05D005331 1.4e-21 108.6 123 56.1
SalBow8G5472 Salvia bowleyana HOM05D007160 ORTHO05D005331 1.9e-18 98.2 122 50.8
SalBow8G2878 Salvia bowleyana HOM05D007160 ORTHO05D005331 3.2e-18 97.4 122 50.8
SalBow8G4606 Salvia bowleyana HOM05D007160 ORTHO05D005331 1.2e-17 95.5 121 50.4
Peaxi162Scf00926g00031 Petunia axillaris HOM05D007160 ORTHO05D005331 2.1e-17 94.7 96 59.4
Nitab4.5_0000144g0130 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.1e-15 89.0 69 65.2
Oeu014779.1 Olea europaea HOM05D007160 ORTHO05D005331 7.4e-15 86.3 120 45.8
DCAR_004048 Daucus carota HOM05D007160 ORTHO05D005331 6.2e-14 83.2 125 42.4
MSTRG.13207 Avicennia marina HOM05D007160 ORTHO05D005331 3.1e-13 80.9 120 44.2
Nitab4.5_0006098g0020 Nicotiana tabacum HOM05D007160 ORTHO05D005331 3.1e-13 80.9 72 63.9
Nitab4.5_0003341g0030 Nicotiana tabacum HOM05D007160 ORTHO05D005331 4.0e-13 80.5 74 62.2
Oeu001099.1 Olea europaea HOM05D007160 ORTHO05D005331 5.3e-13 80.1 114 47.4
Cfa000523 Carpinus fangiana HOM05D007160 ORTHO05D005331 1.5e-12 78.6 136 43.4
Actinidia16571 Actinidia chinensis HOM05D007160 ORTHO05D005331 3.4e-12 77.4 89 49.4
Haze_06386 Corylus avellana HOM05D007160 ORTHO05D005331 4.5e-12 77.0 88 52.3
Prupe.4G052200 Prunus persica HOM05D007160 ORTHO05D005331 5.8e-12 76.6 91 50.5
MSTRG.15854 Avicennia marina HOM05D007160 ORTHO05D005331 9.9e-12 75.9 123 43.9
CiPaw.10G052400 Carya illinoinensis HOM05D007160 ORTHO05D005331 9.9e-12 75.9 126 44.4
Sed0008189 Sechium edule HOM05D007160 ORTHO05D005331 1.7e-11 75.1 94 47.9
Hma1.2p1_0558F.1_g178530 Hydrangea macrophylla HOM05D007160 ORTHO05D005331 2.9e-11 74.3 102 51.0
MSTRG.7356 Avicennia marina HOM05D007160 ORTHO05D005331 3.8e-11 73.9 124 41.9
Medtr4g088385 Medicago truncatula HOM05D007160 ORTHO05D005331 3.8e-11 73.9 112 42.0
QL05p042103 Quercus lobata HOM05D007160 ORTHO05D005331 3.8e-11 73.9 88 51.1
QL05p042154 Quercus lobata HOM05D007160 ORTHO05D005331 3.8e-11 73.9 88 51.1
Sed0007130 Sechium edule HOM05D007160 ORTHO05D005331 8.4e-11 72.8 85 44.7
DCAR_008006 Daucus carota HOM05D007160 ORTHO05D005331 1.9e-10 71.6 121 41.3
Gohir.D10G028200 Gossypium hirsutum HOM05D007160 ORTHO05D005331 4.2e-10 70.5 125 41.6
Gorai.011G030000 Gossypium raimondii HOM05D007160 ORTHO05D005331 4.2e-10 70.5 125 42.4
Gohir.A10G027800 Gossypium hirsutum HOM05D007160 ORTHO05D005331 7.1e-10 69.7 125 41.6
TAR624G0339 Trochodendron aralioides HOM05D007160 ORTHO05D005331 7.1e-10 69.7 95 49.5
TAR627G1090 Trochodendron aralioides HOM05D018497 ORTHO05D005331 7.1e-10 69.7 140 40.0
Lj6g0014856 Lotus japonicus HOM05D007160 ORTHO05D005331 9.3e-10 69.3 139 41.0
Duzib160G0215 Durio zibethinus HOM05D007160 ORTHO05D005331 1.6e-09 68.6 112 43.8
arahy.Tifrunner.gnm1.ann1.704E4A Arachis hypogaea HOM05D007160 ORTHO05D005331 2.1e-09 68.2 129 41.9
Migut.H01472 Erythranthe guttata HOM05D007160 ORTHO05D005331 3.5e-09 67.4 128 41.4
Ca_18588_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 6.0e-09 66.6 121 41.3
MD10G1289700 Malus domestica HOM05D007160 ORTHO05D005331 7.9e-09 66.2 103 43.7
Rhsim02G0134300 Rhododendron simsii HOM05D007160 ORTHO05D005331 7.9e-09 66.2 109 43.1
Ca_00358_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 1.0e-08 65.9 122 40.2
Ca_30973_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 1.0e-08 65.9 122 40.2
Glyma.07G201100 Glycine max HOM05D007160 ORTHO05D005331 1.0e-08 65.9 89 47.2
MD05G1310400 Malus domestica HOM05D007160 ORTHO05D005331 1.0e-08 65.9 125 40.8
ClCG01G023230 Citrullus lanatus HOM05D007160 ORTHO05D005331 1.3e-08 65.5 97 42.3
Lj4g0028244 Lotus japonicus HOM05D007160 ORTHO05D005331 1.3e-08 65.5 88 48.9
VMungo0251G1795 Vigna mungo HOM05D007160 ORTHO05D005331 1.3e-08 65.5 122 39.3
Phvul.002G232100 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 1.8e-08 65.1 88 48.9
MELO3C007263.2 Cucumis melo HOM05D007160 ORTHO05D005331 2.3e-08 64.7 106 45.3
Lsat_1_v5_gn_7_22701 Lactuca sativa HOM05D007160 ORTHO05D005331 2.3e-08 64.7 87 44.8
PGR042G2677 Punica granatum HOM05D007160 ORTHO05D005331 3.0e-08 64.3 90 41.1
Prupe.4G052000 Prunus persica HOM05D007160 ORTHO05D005331 3.9e-08 63.9 92 44.6
CsaV3_6G050380 Cucumis sativus L. HOM05D007160 ORTHO05D005331 5.1e-08 63.5 94 41.5
Duzib235G1074 Durio zibethinus HOM05D007160 ORTHO05D005331 5.1e-08 63.5 116 41.4
Cpa.g.sc27.8 Carica papaya HOM05D007160 ORTHO05D005331 6.7e-08 63.2 106 39.6
TAR629G2975 Trochodendron aralioides HOM05D018497 ORTHO05D021348 6.7e-08 63.2 121 39.7
ECA236G4287 Erigeron canadensis HOM05D007160 ORTHO05D005331 8.7e-08 62.8 126 41.3
Glyma.13G175300 Glycine max HOM05D007160 ORTHO05D005331 1.1e-07 62.4 84 45.2
TPR.G19911 Trifolium pratense HOM05D007160 ORTHO05D005331 1.1e-07 62.4 139 37.4
SalBow7G0780 Salvia bowleyana HOM05D007160 ORTHO05D005331 1.9e-07 61.6 106 43.4
EL10Ac8g20435 Beta vulgaris HOM05D007160 ORTHO05D005331 2.5e-07 61.2 99 40.4
CiPaw.09G063200 Carya illinoinensis HOM05D007160 ORTHO05D005331 2.5e-07 61.2 99 42.4
Lalb_Chr20g0121591 Lupinus albus HOM05D007160 ORTHO05D005331 2.5e-07 61.2 111 43.2
arahy.Tifrunner.gnm1.ann1.AUV6LD Arachis hypogaea HOM05D007160 ORTHO05D005331 3.3e-07 60.8 115 42.6
CANSAT35G1941 Cannabis sativa HOM05D007160 ORTHO05D005331 3.3e-07 60.8 110 37.3
Potri.004G048301 Populus trichocarpa HOM05D007160 ORTHO05D005331 4.3e-07 60.5 100 42.0
Psat1g203080 Pisum sativum HOM05D007160 ORTHO05D005331 5.6e-07 60.1 119 36.1
FAN16G2322 Fragaria x ananassa HOM05D007160 ORTHO05D005331 9.6e-07 59.3 94 47.9
VMungo0540G2483 Vigna mungo HOM05D007160 ORTHO05D005331 9.6e-07 59.3 123 39.0
Dinv40598 Davidia involucrata HOM05D007882 ORTHO05D009870 1.3e-06 58.9 60 50.0
Medtr2g014400 Medicago truncatula HOM05D007160 ORTHO05D005331 1.3e-06 58.9 112 35.7
Potri.011G057500 Populus trichocarpa HOM05D007160 ORTHO05D005331 1.3e-06 58.9 119 38.7
FAN21G2372 Fragaria x ananassa HOM05D007160 ORTHO05D005331 2.1e-06 58.2 112 42.0
Glyma.15G077600 Glycine max HOM05D007160 ORTHO05D005331 2.1e-06 58.2 118 37.3
FvH4_3g08671 Fragaria vesca HOM05D007160 ORTHO05D005331 3.7e-06 57.4 92 43.5
FAN11G0877 Fragaria x ananassa HOM05D007160 ORTHO05D005331 3.7e-06 57.4 92 43.5
PSO832G0372 Papaver somniferum HOM05D025247 ORTHO05D050219 4.8e-06 57.0 127 38.6
Phvul.006G182700 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 6.2e-06 56.6 119 38.7
Glyma.13G236100 Glycine max HOM05D007160 ORTHO05D005331 8.2e-06 56.2 91 42.9
SalBow7G0182 Salvia bowleyana HOM05D007160 ORTHO05D005331 8.2e-06 56.2 79 45.6
TWI63G1823 Tripterygium wilfordii HOM05D007160 ORTHO05D005331 8.2e-06 56.2 92 40.2


User provided reference genes

Program Settings