Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000516g0070 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.1e-89 334.0 448 100.0
Nitab4.5_0001375g0120 Nicotiana tabacum HOM05D007160 ORTHO05D005331 3.1e-56 223.8 125 90.4
Nitab4.5_0000516g0060 Nicotiana tabacum HOM05D007160 ORTHO05D005331 8.0e-52 209.1 125 86.4
Nitab4.5_0001375g0150 Nicotiana tabacum HOM05D007160 ORTHO05D005331 3.9e-51 206.8 124 85.5
Nitab4.5_0000516g0090 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.5e-50 204.9 125 84.8
Nitab4.5_0001375g0140 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.1e-48 198.7 124 83.9
Peaxi162Scf00031g00084 Petunia axillaris HOM05D007160 ORTHO05D005331 1.5e-26 125.2 122 58.2
Nitab4.5_0004359g0050 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.8e-25 120.9 121 60.3
Nitab4.5_0001955g0170 Nicotiana tabacum HOM05D007160 ORTHO05D005331 8.3e-25 119.4 121 59.5
PGSC0003DMG400031775 Solanum tuberosum HOM05D007160 ORTHO05D005331 2.7e-23 114.4 125 52.8
Sopen02g022600 Solanum pennellii HOM05D007160 ORTHO05D005331 1.0e-22 112.5 127 54.3
Solyc02g077710.1 Solanum lycopersicum HOM05D007160 ORTHO05D005331 1.3e-22 112.1 127 54.3
CAN.G529.50 Capsicum annuum HOM05D007160 ORTHO05D005331 2.3e-22 111.3 117 55.6
Cc02_g13790 Coffea canephora HOM05D007160 ORTHO05D005331 5.0e-22 110.2 124 57.3
Peaxi162Scf01018g00012 Petunia axillaris HOM05D007160 ORTHO05D005331 5.6e-21 106.7 123 58.5
PGSC0003DMG400022807 Solanum tuberosum HOM05D007160 ORTHO05D005331 9.5e-21 105.9 127 52.0
SalBow8G5472 Salvia bowleyana HOM05D007160 ORTHO05D005331 4.9e-17 93.6 121 50.4
SalBow8G2878 Salvia bowleyana HOM05D007160 ORTHO05D005331 8.3e-17 92.8 121 50.4
SalBow8G4606 Salvia bowleyana HOM05D007160 ORTHO05D005331 8.3e-17 92.8 121 50.4
Nitab4.5_0006098g0020 Nicotiana tabacum HOM05D007160 ORTHO05D005331 4.6e-15 87.0 74 66.2
Peaxi162Scf00926g00031 Petunia axillaris HOM05D007160 ORTHO05D005331 1.0e-14 85.9 96 58.3
Nitab4.5_0000144g0130 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.7e-14 85.1 68 63.2
Oeu014779.1 Olea europaea HOM05D007160 ORTHO05D005331 1.7e-14 85.1 123 47.2
Nitab4.5_0003341g0030 Nicotiana tabacum HOM05D007160 ORTHO05D005331 3.0e-14 84.3 120 46.7
DCAR_004048 Daucus carota HOM05D007160 ORTHO05D005331 5.0e-14 83.6 125 42.4
CiPaw.10G052400 Carya illinoinensis HOM05D007160 ORTHO05D005331 6.2e-12 76.6 119 46.2
Oeu001099.1 Olea europaea HOM05D007160 ORTHO05D005331 1.4e-11 75.5 114 47.4
Prupe.4G052200 Prunus persica HOM05D007160 ORTHO05D005331 1.4e-11 75.5 91 49.5
MSTRG.7356 Avicennia marina HOM05D007160 ORTHO05D005331 3.1e-11 74.3 124 41.1
Actinidia16571 Actinidia chinensis HOM05D007160 ORTHO05D005331 4.0e-11 73.9 89 47.2
Sed0008189 Sechium edule HOM05D007160 ORTHO05D005331 4.0e-11 73.9 90 48.9
Cfa000523 Carpinus fangiana HOM05D007160 ORTHO05D005331 5.2e-11 73.6 103 47.6
MSTRG.13207 Avicennia marina HOM05D007160 ORTHO05D005331 1.2e-10 72.4 121 44.6
QL05p042103 Quercus lobata HOM05D007160 ORTHO05D005331 1.5e-10 72.0 88 48.9
QL05p042154 Quercus lobata HOM05D007160 ORTHO05D005331 1.5e-10 72.0 88 48.9
Sed0007130 Sechium edule HOM05D007160 ORTHO05D005331 1.5e-10 72.0 85 43.5
Haze_06386 Corylus avellana HOM05D007160 ORTHO05D005331 2.6e-10 71.2 88 48.9
Hma1.2p1_0558F.1_g178530 Hydrangea macrophylla HOM05D007160 ORTHO05D005331 2.6e-10 71.2 100 47.0
Lj6g0014856 Lotus japonicus HOM05D007160 ORTHO05D005331 4.4e-10 70.5 130 41.5
Migut.H01472 Erythranthe guttata HOM05D007160 ORTHO05D005331 5.8e-10 70.1 129 41.9
MSTRG.15854 Avicennia marina HOM05D007160 ORTHO05D005331 2.2e-09 68.2 128 43.8
Gorai.011G030000 Gossypium raimondii HOM05D007160 ORTHO05D005331 2.2e-09 68.2 123 42.3
MD05G1310400 Malus domestica HOM05D007160 ORTHO05D005331 2.2e-09 68.2 125 41.6
Ca_00358_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 3.7e-09 67.4 118 43.2
Ca_30973_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 3.7e-09 67.4 118 43.2
VMungo0251G1795 Vigna mungo HOM05D007160 ORTHO05D005331 3.7e-09 67.4 127 39.4
Lalb_Chr20g0121591 Lupinus albus HOM05D007160 ORTHO05D005331 4.9e-09 67.0 120 42.5
Gohir.D10G028200 Gossypium hirsutum HOM05D007160 ORTHO05D005331 6.4e-09 66.6 123 40.7
ECA236G4287 Erigeron canadensis HOM05D007160 ORTHO05D005331 8.3e-09 66.2 116 40.5
Duzib192G1060 Durio zibethinus HOM05D007160 ORTHO05D005331 1.9e-08 65.1 143 39.2
MD10G1289700 Malus domestica HOM05D007160 ORTHO05D005331 1.9e-08 65.1 101 43.6
Medtr4g088385 Medicago truncatula HOM05D007160 ORTHO05D005331 1.9e-08 65.1 112 38.4
arahy.Tifrunner.gnm1.ann1.704E4A Arachis hypogaea HOM05D007160 ORTHO05D005331 2.4e-08 64.7 125 40.0
SalBow7G0780 Salvia bowleyana HOM05D007160 ORTHO05D005331 2.4e-08 64.7 120 41.7
DCAR_008006 Daucus carota HOM05D007160 ORTHO05D005331 3.2e-08 64.3 139 38.1
FAN16G2322 Fragaria x ananassa HOM05D007160 ORTHO05D005331 3.2e-08 64.3 89 48.3
Glyma.15G077600 Glycine max HOM05D007160 ORTHO05D005331 3.2e-08 64.3 130 40.8
Lsat_1_v5_gn_7_22701 Lactuca sativa HOM05D007160 ORTHO05D005331 3.2e-08 64.3 103 41.7
Cpa.g.sc27.8 Carica papaya HOM05D007160 ORTHO05D005331 4.1e-08 63.9 73 53.4
SalBow7G0182 Salvia bowleyana HOM05D007160 ORTHO05D005331 4.1e-08 63.9 121 40.5
Gohir.A10G027800 Gossypium hirsutum HOM05D007160 ORTHO05D005331 5.4e-08 63.5 123 39.8
Potri.011G057500 Populus trichocarpa HOM05D007160 ORTHO05D005331 5.4e-08 63.5 119 42.0
CiPaw.09G063200 Carya illinoinensis HOM05D007160 ORTHO05D005331 7.0e-08 63.2 101 43.6
TAR627G1090 Trochodendron aralioides HOM05D018497 ORTHO05D005331 7.0e-08 63.2 140 37.9
VMungo0540G2483 Vigna mungo HOM05D007160 ORTHO05D005331 7.0e-08 63.2 135 35.6
Glyma.13G236100 Glycine max HOM05D007160 ORTHO05D005331 1.2e-07 62.4 93 44.1
Phvul.002G232100 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 1.2e-07 62.4 87 46.0
TWI63G1823 Tripterygium wilfordii HOM05D007160 ORTHO05D005331 1.2e-07 62.4 91 40.7
Duzib235G1074 Durio zibethinus HOM05D007160 ORTHO05D005331 1.6e-07 62.0 108 43.5
Glyma.07G201100 Glycine max HOM05D007160 ORTHO05D005331 1.6e-07 62.0 89 44.9
Psat1g203080 Pisum sativum HOM05D007160 ORTHO05D005331 1.6e-07 62.0 119 36.1
CsaV3_6G050380 Cucumis sativus L. HOM05D007160 ORTHO05D005331 2.1e-07 61.6 90 38.9
Potri.004G048301 Populus trichocarpa HOM05D007160 ORTHO05D005331 2.7e-07 61.2 126 41.3
TAR624G0339 Trochodendron aralioides HOM05D007160 ORTHO05D005331 2.7e-07 61.2 95 44.2
Ca_18588_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 4.6e-07 60.5 134 36.6
Dinv17351 Davidia involucrata HOM05D007160 ORTHO05D005331 4.6e-07 60.5 105 42.9
FvH4_3g08671 Fragaria vesca HOM05D007160 ORTHO05D005331 4.6e-07 60.5 81 43.2
FAN11G0877 Fragaria x ananassa HOM05D007160 ORTHO05D005331 4.6e-07 60.5 81 43.2
FAN21G2372 Fragaria x ananassa HOM05D007160 ORTHO05D005331 4.6e-07 60.5 97 42.3
Lj4g0028244 Lotus japonicus HOM05D007160 ORTHO05D005331 4.6e-07 60.5 100 45.0
Phvul.006G182700 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 4.6e-07 60.5 93 43.0
Prupe.4G052000 Prunus persica HOM05D007160 ORTHO05D005331 6.0e-07 60.1 92 42.4
Medtr2g014400 Medicago truncatula HOM05D007160 ORTHO05D005331 1.0e-06 59.3 125 35.2
Rhsim02G0134300 Rhododendron simsii HOM05D007160 ORTHO05D005331 1.0e-06 59.3 108 39.8
Sabra04G0030300 Salix brachista HOM05D007160 ORTHO05D005331 1.3e-06 58.9 112 38.4
Sabra11G0039600 Salix brachista HOM05D007160 ORTHO05D005331 1.7e-06 58.5 114 39.5
EL10Ac8g20435 Beta vulgaris HOM05D007160 ORTHO05D005331 2.3e-06 58.2 90 36.7
MELO3C007263.2 Cucumis melo HOM05D007160 ORTHO05D005331 3.0e-06 57.8 89 41.6
arahy.Tifrunner.gnm1.ann1.AUV6LD Arachis hypogaea HOM05D007160 ORTHO05D005331 5.1e-06 57.0 111 39.6
ClCG01G023230 Citrullus lanatus HOM05D007160 ORTHO05D005331 5.1e-06 57.0 82 40.2
Duzib160G0215 Durio zibethinus HOM05D007160 ORTHO05D005331 5.1e-06 57.0 112 40.2
Glyma.13G175300 Glycine max HOM05D007160 ORTHO05D005331 5.1e-06 57.0 82 42.7
TPR.G19911 Trifolium pratense HOM05D007160 ORTHO05D005331 5.1e-06 57.0 139 34.5
CANSAT35G1941 Cannabis sativa HOM05D007160 ORTHO05D005331 8.6e-06 56.2 110 36.4
PGR042G2677 Punica granatum HOM05D007160 ORTHO05D005331 8.6e-06 56.2 95 40.0


User provided reference genes

Program Settings