Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000513g0110 Nicotiana tabacum HOM05D007614 ORTHO05D009538 0.0e+00 2561.6 1438 100.0
Nitab4.5_0002628g0040 Nicotiana tabacum HOM05D007614 ORTHO05D009538 0.0e+00 2454.1 1438 90.1
Peaxi162Scf00065g01533 Petunia axillaris HOM05D007614 ORTHO05D009538 0.0e+00 2208.3 1446 80.8
Sopen01g028150 Solanum pennellii HOM05D007614 ORTHO05D009538 0.0e+00 2142.1 1518 77.3
Solyc01g066610.4 Solanum lycopersicum HOM05D007614 ORTHO05D009538 0.0e+00 2132.5 1364 83.6
PGSC0003DMG400011332 Solanum tuberosum HOM05D007614 ORTHO05D009538 0.0e+00 1969.1 1242 85.0
Dinv29737 Davidia involucrata HOM05D007614 ORTHO05D009538 0.0e+00 1427.9 1429 55.3
Oeu006410.1 Olea europaea HOM05D007614 ORTHO05D009538 0.0e+00 1426.0 1451 55.5
CSS0029892 Camellia sinensis var. sinensis HOM05D007614 ORTHO05D009538 0.0e+00 1416.4 1445 54.4
CSS0000522 Camellia sinensis var. sinensis HOM05D007614 ORTHO05D009538 0.0e+00 1397.1 1445 54.0
Cc03_g01650 Coffea canephora HOM05D007614 ORTHO05D009538 0.0e+00 1385.5 1430 55.5
QL06p010082 Quercus lobata HOM05D007614 ORTHO05D009538 0.0e+00 1364.4 1430 54.1
TAR365G0799 Trochodendron aralioides HOM05D007614 ORTHO05D009538 0.0e+00 1359.0 1428 53.1
SalBow2G0719 Salvia bowleyana HOM05D007614 ORTHO05D009538 0.0e+00 1347.4 1345 55.2
SGA_v2.0_scaffold67G22611 Striga asiatica HOM05D007614 ORTHO05D009538 0.0e+00 1328.5 1354 54.7
GSVIVG01035126001 Vitis vinifera HOM05D007614 ORTHO05D009538 0.0e+00 1327.8 1300 56.6
Atru.chr6.1993 Acer truncatum HOM05D007614 ORTHO05D009538 0.0e+00 1322.8 1430 53.9
Haze_01174 Corylus avellana HOM05D007614 ORTHO05D009538 0.0e+00 1313.1 1428 51.9
Cfa015415 Carpinus fangiana HOM05D007614 ORTHO05D009538 0.0e+00 1311.2 1268 56.5
MD13G1166500 Malus domestica HOM05D007614 ORTHO05D009538 0.0e+00 1303.9 1333 54.2
Lj3C822G9 Lonicera japonica HOM05D007614 ORTHO05D009538 0.0e+00 1298.1 1248 57.9
RcHm_v2.0_Chr4g0423071 Rosa chinensis HOM05D007614 ORTHO05D009538 0.0e+00 1292.7 1332 53.9
CiPaw.02G080700 Carya illinoinensis HOM05D007614 ORTHO05D009538 0.0e+00 1273.1 1261 55.0
CAN.G421.11 Capsicum annuum HOM05D007614 ORTHO05D009538 0.0e+00 1270.8 904 75.9
Ciclev10004153m.g Citrus clementina HOM05D007614 ORTHO05D009538 0.0e+00 1268.1 1377 51.9
FAN07G2176 Fragaria x ananassa HOM05D007614 ORTHO05D009538 0.0e+00 1255.0 1345 52.6
Nn3g21526 Nelumbo nucifera HOM05D007614 ORTHO05D009538 0.0e+00 1249.6 1431 51.3
Duzib151G0258 Durio zibethinus HOM05D007614 ORTHO05D009538 0.0e+00 1239.6 1328 52.1
Potri.010G011800 Populus trichocarpa HOM05D007614 ORTHO05D009538 0.0e+00 1236.5 1331 51.5
FAN12G3001 Fragaria x ananassa HOM05D007614 ORTHO05D009538 0.0e+00 1233.8 1336 52.2
TWI73G0642 Tripterygium wilfordii HOM05D007614 ORTHO05D009538 0.0e+00 1226.8 1334 52.3
FAN12G0400 Fragaria x ananassa HOM05D007614 ORTHO05D009538 0.0e+00 1226.5 1338 51.9
Sabra10G0007500 Salix brachista HOM05D007614 ORTHO05D009538 0.0e+00 1218.0 1329 51.2
Aqoxy2G02920 Aquilegia oxysepala HOM05D007614 ORTHO05D009538 0.0e+00 1213.0 1440 50.9
FvH4_4g18510 Fragaria vesca HOM05D007614 ORTHO05D009538 0.0e+00 1209.9 1253 54.1
FAN17G0278 Fragaria x ananassa HOM05D007614 ORTHO05D009538 0.0e+00 1207.2 1251 54.0
MBI19_g34788_MAGBIO Magnolia biondii HOM05D007614 ORTHO05D009538 0.0e+00 1196.0 1345 50.5
COL.COLO4_37910 Corchorus olitorius HOM05D007614 ORTHO05D009538 0.0e+00 1191.4 1332 51.1
Sc13g0003320 Simmondsia chinensis HOM05D007614 ORTHO05D009538 0.0e+00 1189.9 1332 50.5
CANSAT78G1530 Cannabis sativa HOM05D007614 ORTHO05D009538 0.0e+00 1189.1 1332 50.1
PGR031G0733 Punica granatum HOM05D007614 ORTHO05D009538 0.0e+00 1186.0 1436 47.8
Gorai.006G076700 Gossypium raimondii HOM05D007614 ORTHO05D009538 0.0e+00 1178.3 1429 48.5
PSO407G0339 Papaver somniferum HOM05D007614 ORTHO05D009538 0.0e+00 1154.0 1446 46.8
Thhalv10003518m.g Eutrema salsugineum HOM05D007614 ORTHO05D009538 0.0e+00 1129.4 1359 46.4
Lsat_1_v5_gn_6_96381 Lactuca sativa HOM05D007614 ORTHO05D009538 0.0e+00 1120.1 1421 47.2
THA.LOC104827336 Tarenaya hassleriana HOM05D007614 ORTHO05D009538 0.0e+00 1109.4 1439 45.2
C02p57050 Brassica napus HOM05D007614 ORTHO05D009538 0.0e+00 1106.3 1352 47.0
BcaB07g34217 Brassica carinata HOM05D007614 ORTHO05D009538 0.0e+00 1105.5 1378 45.4
BolC2t11775H Brassica oleracea HOM05D007614 ORTHO05D009538 0.0e+00 1102.4 1357 46.9
DCAR_027058 Daucus carota HOM05D007614 ORTHO05D009538 0.0e+00 1101.7 1225 53.3
CARHR182630 Cardamine hirsuta HOM05D007614 ORTHO05D009538 0.0e+00 1100.5 1362 46.4
A02p37890 Brassica napus HOM05D007614 ORTHO05D009538 0.0e+00 1094.3 1444 44.2
AL8G22620 Arabidopsis lyrata HOM05D007614 ORTHO05D009538 0.0e+00 1088.2 1330 46.5
AT5G49110 Arabidopsis thaliana HOM05D007614 ORTHO05D009538 0.0e+00 1086.6 1329 46.2
BraA02t08773Z Brassica rapa HOM05D007614 ORTHO05D009538 0.0e+00 1082.8 1345 45.5
ECA240G3304 Erigeron canadensis HOM05D007614 ORTHO05D009538 0.0e+00 1078.9 1184 52.1
Prupe.1G132900 Prunus persica HOM05D007614 ORTHO05D009538 9.7e-302 1040.8 1113 52.9
Thecc.04G287600 Theobroma cacao HOM05D007614 ORTHO05D009538 2.0e-291 1006.5 1053 53.5
BcaC03g17700 Brassica carinata HOM05D007614 ORTHO05D009538 7.7e-291 1004.6 1357 44.1
ATR0796G125 Amborella trichopoda HOM05D007614 ORTHO05D009538 2.3e-282 976.5 1348 43.6
Manes.03G197500 Manihot esculenta HOM05D007614 ORTHO05D009538 2.3e-263 913.3 1032 49.4
Hma1.2p1_1807F.1_g303400 Hydrangea macrophylla HOM05D007614 ORTHO05D009538 2.2e-261 906.7 861 58.4
Gohir.A09G063000 Gossypium hirsutum HOM05D007614 ORTHO05D009538 3.9e-258 896.0 1055 50.0
Eucgr.B01588 Eucalyptus grandis HOM05D007614 ORTHO05D009538 5.1e-258 895.6 1051 48.1
SEGI_15090 Sequoiadendron giganteum HOM05D007614 ORTHO05D009538 2.5e-257 893.3 1367 41.2
Gohir.D09G062000 Gossypium hirsutum HOM05D007614 ORTHO05D009538 4.3e-257 892.5 1062 48.8
HPP92_013726 Vanilla planifolia HOM05D007614 ORTHO05D009538 1.8e-255 887.1 1338 41.5
Cpa.g.sc16.197 Carica papaya HOM05D007614 ORTHO05D009538 2.0e-254 883.6 1053 48.2
Hma1.2p1_0804F.1_g220930 Hydrangea macrophylla HOM05D007614 ORTHO05D009538 1.1e-247 861.3 851 56.9
Zm00001eb016350 Zea mays HOM05D007614 ORTHO05D009538 1.9e-225 787.3 1294 40.3
Migut.G00138 Erythranthe guttata HOM05D007614 ORTHO05D009538 3.3e-217 760.0 701 57.5
BcaC03g17696 Brassica carinata HOM05D007614 ORTHO05D009538 1.0e-194 685.3 768 49.1
CDE01G0153 Ceratophyllum demersum HOM05D007614 ORTHO05D009538 3.9e-194 683.3 1349 35.4
Mapoly0051s0073 Marchantia polymorpha HOM05D007614 ORTHO05D009538 4.0e-186 656.8 1353 35.1
Actinidia00005 Actinidia chinensis HOM05D007614 ORTHO05D009538 9.1e-183 645.6 713 50.6
Pp3c13_17960 Physcomitrium patens HOM05D007614 ORTHO05D009538 6.3e-176 622.9 1390 34.5
AagrBONN_evm.TU.Sc2ySwM_344.1702 Anthoceros agrestis HOM05D007614 ORTHO05D009538 4.7e-171 606.7 1263 35.0
AagrBONN_evm.TU.Sc2ySwM_344.1704 Anthoceros agrestis HOM05D007614 ORTHO05D009538 4.7e-171 606.7 1262 35.0
HanXRQChr03g0089461 Helianthus annuus HOM05D007614 ORTHO05D009538 2.2e-168 597.8 619 53.0
Migut.G00137 Erythranthe guttata HOM05D007614 ORTHO05D009538 1.1e-132 479.2 689 46.6
MSTRG.3900 Avicennia marina HOM05D007614 ORTHO05D009538 4.5e-121 440.7 481 53.4
CAN.G421.12 Capsicum annuum HOM05D007614 ORTHO05D009538 1.4e-114 419.1 392 67.9
CBR_g12376 Chara braunii HOM05D007614 ORTHO05D009538 2.0e-105 388.7 1322 28.9
HanXRQChr03g0089481 Helianthus annuus HOM05D007614 ORTHO05D009538 4.2e-79 301.2 292 58.2
BcaC03g17697 Brassica carinata HOM05D007614 ORTHO05D009538 7.2e-79 300.4 345 48.7
Cpa.g.c41899 Carica papaya HOM05D007614 ORTHO05D009538 5.4e-66 257.7 279 53.8
BcaB01g01537 Brassica carinata HOM05D007614 ORTHO05D009538 1.1e-55 223.4 326 39.9
Cc01_g15100 Coffea canephora HOM05D007614 ORTHO05D009538 1.2e-54 219.9 257 58.0
Eucgr.B01587 Eucalyptus grandis HOM05D007614 ORTHO05D009538 1.4e-37 163.3 217 47.0
Actinidia14288 Actinidia chinensis HOM05D007614 ORTHO05D009538 1.5e-36 159.8 120 70.0
Actinidia27756 Actinidia chinensis HOM05D007614 ORTHO05D009538 1.6e-30 139.8 104 71.2
HanXRQChr03g0089471 Helianthus annuus HOM05D007614 ORTHO05D009538 6.8e-29 134.4 285 34.4
BcaB04g20478 Brassica carinata HOM05D007614 ORTHO05D009538 9.2e-26 124.0 103 55.3
Os03g0341200 Oryza sativa ssp. japonica HOM05D007614 ORTHO05D009538 4.9e-19 101.7 184 40.2
Cre07.g314700 Chlamydomonas reinhardtii HOM05D058327 ORTHO05D009538 4.9e-11 75.1 277 26.4
Zm00001eb167500 Zea mays HOM05D000563 ORTHO05D009538 6.4e-11 74.7 118 40.7
Actinidia14287 Actinidia chinensis HOM05D065619 ORTHO05D037991 4.6e-09 68.6 89 46.1
Os05g0314700 Oryza sativa ssp. japonica HOM05D007614 ORTHO05D009538 6.2e-06 58.2 98 37.8


User provided reference genes

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