Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000513g0070 Nicotiana tabacum HOM05D004081 ORTHO05D004935 1.3e-134 483.0 235 100.0
PGSC0003DMG400005495 Solanum tuberosum HOM05D004081 ORTHO05D004935 3.7e-65 252.3 336 48.5
Sopen08g022280 Solanum pennellii HOM05D004081 ORTHO05D004935 4.5e-63 245.4 334 47.3
Solyc08g068400.4 Solanum lycopersicum HOM05D004081 ORTHO05D004935 7.7e-63 244.6 336 47.3
Peaxi162Scf00090g00194 Petunia axillaris HOM05D004081 ORTHO05D004935 6.9e-56 221.5 338 43.2
Nitab4.5_0001499g0090 Nicotiana tabacum HOM05D004081 ORTHO05D004935 2.5e-53 213.0 337 42.7
Nitab4.5_0002411g0020 Nicotiana tabacum HOM05D004081 ORTHO05D004935 2.5e-53 213.0 337 42.7
Rhsim02G0180200 Rhododendron simsii HOM05D001113 ORTHO05D000968 3.6e-52 209.1 290 45.9
CAN.G21.43 Capsicum annuum HOM05D004081 ORTHO05D004935 1.0e-51 207.6 309 45.3
Sopen05g025590 Solanum pennellii HOM05D004081 ORTHO05D004935 2.3e-51 206.5 337 40.9
Migut.A00225 Erythranthe guttata HOM05D004081 ORTHO05D004935 3.0e-51 206.1 334 40.4
Cc08_g09170 Coffea canephora HOM05D004081 ORTHO05D004935 5.1e-51 205.3 332 41.3
MSTRG.11708 Avicennia marina HOM05D004081 ORTHO05D004935 1.5e-50 203.8 333 40.5
PGSC0003DMG400020762 Solanum tuberosum HOM05D004081 ORTHO05D004935 2.6e-50 203.0 358 39.4
Solyc05g041530.3 Solanum lycopersicum HOM05D004081 ORTHO05D004935 1.3e-49 200.7 337 39.8
Oeu011271.1 Olea europaea HOM05D004081 ORTHO05D004935 2.2e-49 199.9 365 38.4
CSS0039336 Camellia sinensis var. sinensis HOM05D004081 ORTHO05D004935 8.2e-49 198.0 334 40.1
CSS0042840 Camellia sinensis var. sinensis HOM05D004081 ORTHO05D004935 1.8e-48 196.8 329 39.8
Potri.006G240600 Populus trichocarpa HOM05D004081 ORTHO05D004935 7.0e-48 194.9 331 38.7
Eucgr.E03517 Eucalyptus grandis HOM05D004081 ORTHO05D004935 9.1e-48 194.5 333 39.3
Sc23g0006000 Simmondsia chinensis HOM05D004081 ORTHO05D004935 1.6e-47 193.7 334 38.6
Gohir.A06G094300 Gossypium hirsutum HOM05D004081 ORTHO05D004935 2.0e-47 193.4 319 40.1
Sabra06G0188200 Salix brachista HOM05D004081 ORTHO05D004935 3.5e-47 192.6 332 37.7
CSS0025305 Camellia sinensis var. sinensis HOM05D004081 ORTHO05D004935 5.9e-47 191.8 339 41.3
PGR004G0014 Punica granatum HOM05D004081 ORTHO05D004935 1.0e-46 191.0 332 39.5
Actinidia31231 Actinidia chinensis HOM05D004081 ORTHO05D004935 1.7e-46 190.3 334 38.9
FAN20G0986 Fragaria x ananassa HOM05D004081 ORTHO05D004935 1.7e-46 190.3 335 39.1
Gohir.D06G093900 Gossypium hirsutum HOM05D004081 ORTHO05D004935 2.2e-46 189.9 334 37.7
Gorai.010G108400 Gossypium raimondii HOM05D004081 ORTHO05D004935 2.2e-46 189.9 334 37.7
Aqoxy7G01585 Aquilegia oxysepala HOM05D004081 ORTHO05D004935 2.9e-46 189.5 333 39.6
SGA_v2.0_scaffold243G44290 Striga asiatica HOM05D004081 ORTHO05D004935 2.9e-46 189.5 330 38.2
Thecc.09G041800 Theobroma cacao HOM05D004081 ORTHO05D004935 3.8e-46 189.1 335 37.6
FvH4_2g35900 Fragaria vesca HOM05D004081 ORTHO05D004935 8.5e-46 188.0 335 38.5
FAN27G0952 Fragaria x ananassa HOM05D004081 ORTHO05D004935 8.5e-46 188.0 335 38.5
Gohir.D06G094000 Gossypium hirsutum HOM05D004081 ORTHO05D004935 8.5e-46 188.0 333 38.1
vmacro11071 Vaccinium macrocarpon HOM05D004081 ORTHO05D004935 2.5e-45 186.4 334 38.9
Gorai.010G108500 Gossypium raimondii HOM05D004081 ORTHO05D004935 4.2e-45 185.7 342 37.4
RcHm_v2.0_Chr6g0305921 Rosa chinensis HOM05D004081 ORTHO05D004935 7.2e-45 184.9 335 38.2
ECA236G4667 Erigeron canadensis HOM05D004081 ORTHO05D004935 1.2e-44 184.1 334 37.7
QL12p029513 Quercus lobata HOM05D004081 ORTHO05D004935 1.2e-44 184.1 346 38.4
Manes.03G062100 Manihot esculenta HOM05D004081 ORTHO05D004935 1.6e-44 183.7 340 39.1
Nn3g18089 Nelumbo nucifera HOM05D004081 ORTHO05D004935 1.6e-44 183.7 333 38.7
Lj7A705T29 Lonicera japonica HOM05D004081 ORTHO05D004935 2.7e-44 183.0 301 41.5
MD08G1116700 Malus domestica HOM05D004081 ORTHO05D004935 6.1e-44 181.8 334 37.1
Prupe.1G451100 Prunus persica HOM05D004081 ORTHO05D004935 6.1e-44 181.8 333 37.8
GSVIVG01035653001 Vitis vinifera HOM05D004081 ORTHO05D004935 6.1e-44 181.8 332 38.0
Duzib150G1044 Durio zibethinus HOM05D004081 ORTHO05D004935 1.0e-43 181.0 335 37.0
TAR383G0460 Trochodendron aralioides HOM05D004081 ORTHO05D004935 1.4e-43 180.6 332 38.0
CAN.G21.42 Capsicum annuum HOM05D004081 ORTHO05D004935 3.0e-43 179.5 243 47.7
unitig_748.g7994 Utricularia gibba HOM05D004081 ORTHO05D004935 1.1e-42 177.6 341 37.0
HanXRQChr16g0510231 Helianthus annuus HOM05D004081 ORTHO05D004935 1.5e-42 177.2 338 37.6
Sc06g0000750 Simmondsia chinensis HOM05D004081 ORTHO05D004935 2.0e-42 176.8 331 36.3
SalBow4G2011 Salvia bowleyana HOM05D004081 ORTHO05D004935 2.6e-42 176.4 324 37.0
AUR62009311 Chenopodium quinoa HOM05D004081 ORTHO05D004935 3.3e-42 176.0 346 37.9
Duzib168G0078 Durio zibethinus HOM05D004081 ORTHO05D004935 4.4e-42 175.6 342 36.8
AUR62029665 Chenopodium quinoa HOM05D004081 ORTHO05D004935 5.7e-42 175.3 338 38.8
Manes.16G071800 Manihot esculenta HOM05D004081 ORTHO05D004935 5.7e-42 175.3 332 38.6
AUR62041725 Chenopodium quinoa HOM05D004081 ORTHO05D004935 1.3e-41 174.1 338 38.5
TWI34G1344 Tripterygium wilfordii HOM05D004081 ORTHO05D004935 1.3e-41 174.1 339 38.1
COL.COLO4_18679 Corchorus olitorius HOM05D004081 ORTHO05D004935 2.8e-41 172.9 332 36.4
Os06g0163200 Oryza sativa ssp. japonica HOM05D004081 ORTHO05D004935 1.8e-40 170.2 343 36.7
CSS0003690 Camellia sinensis var. sinensis HOM05D004081 ORTHO05D004935 2.4e-40 169.9 307 38.8
ClCG11G015230 Citrullus lanatus HOM05D004081 ORTHO05D004935 3.1e-40 169.5 331 37.5
PSO566G0156 Papaver somniferum HOM05D004081 ORTHO05D004935 3.1e-40 169.5 344 36.6
EL10Ac2g04053 Beta vulgaris HOM05D004081 ORTHO05D004935 4.1e-40 169.1 335 37.3
CiPaw.07G206000 Carya illinoinensis HOM05D004081 ORTHO05D004935 4.5e-39 165.6 309 37.9
Duzib168G2093 Durio zibethinus HOM05D004081 ORTHO05D004935 4.5e-39 165.6 337 36.8
arahy.Tifrunner.gnm1.ann1.QHLN3W Arachis hypogaea HOM05D004081 ORTHO05D004935 7.7e-39 164.9 336 35.4
Sed0008402 Sechium edule HOM05D004081 ORTHO05D004935 7.7e-39 164.9 331 36.6
MELO3C003456.2 Cucumis melo HOM05D004081 ORTHO05D004935 1.7e-38 163.7 331 36.6
PSO782G5115 Papaver somniferum HOM05D004081 ORTHO05D004935 1.7e-38 163.7 335 36.7
TPR.G1357 Trifolium pratense HOM05D004081 ORTHO05D004935 2.2e-38 163.3 338 35.2
VMungo1309G1316 Vigna mungo HOM05D004081 ORTHO05D004935 3.8e-38 162.5 336 34.8
Phvul.009G106100 Phaseolus vulgaris HOM05D004081 ORTHO05D004935 5.0e-38 162.2 343 34.1
CsaV3_3G048650 Cucumis sativus L. HOM05D004081 ORTHO05D004935 2.5e-37 159.8 331 36.0
Glyma.04G081400 Glycine max HOM05D004081 ORTHO05D004935 2.5e-37 159.8 337 35.0
Hma1.2p1_2102F.1_g314030 Hydrangea macrophylla HOM05D004081 ORTHO05D004935 3.2e-37 159.5 239 43.5
Haze_21871 Corylus avellana HOM05D004081 ORTHO05D004935 4.2e-37 159.1 334 37.1
Glyma.06G083200 Glycine max HOM05D004081 ORTHO05D004935 4.2e-37 159.1 336 35.1
Ah.10g035110 Amaranthus hybridus HOM05D004081 ORTHO05D004935 7.2e-37 158.3 336 36.0
Hund03409 Selenicereus undatus HOM05D004081 ORTHO05D004935 7.2e-37 158.3 395 32.4
CSS0038651 Camellia sinensis var. sinensis HOM05D004081 ORTHO05D004935 9.4e-37 157.9 307 37.5
Ca_15610_v3 Cicer arietinum L. HOM05D004081 ORTHO05D004935 9.4e-37 157.9 335 34.6
Lj1g0015510 Lotus japonicus HOM05D004081 ORTHO05D004935 9.4e-37 157.9 338 34.9
arahy.Tifrunner.gnm1.ann1.Y1FCW9 Arachis hypogaea HOM05D004081 ORTHO05D004935 1.6e-36 157.1 352 33.5
Gohir.A06G094400 Gossypium hirsutum HOM05D004081 ORTHO05D004935 1.6e-36 157.1 292 36.6
Rhsim02G0180500 Rhododendron simsii HOM05D004081 ORTHO05D004935 1.6e-36 157.1 291 38.8
Thecc.09G041700 Theobroma cacao HOM05D004081 ORTHO05D004935 1.6e-36 157.1 335 35.5
Lsat_1_v5_gn_8_105500 Lactuca sativa HOM05D004081 ORTHO05D004935 2.1e-36 156.8 325 36.0
Glyma.06G083100 Glycine max HOM05D004081 ORTHO05D004935 8.0e-36 154.8 336 34.2
Ciclev10009208m.g Citrus clementina HOM05D004081 ORTHO05D004935 1.8e-35 153.7 237 42.2
Cfa013350 Carpinus fangiana HOM05D004081 ORTHO05D004935 5.2e-35 152.1 239 42.7
CARHR187640 Cardamine hirsuta HOM05D004081 ORTHO05D004935 2.0e-34 150.2 341 32.6
Thhalv10004493m.g Eutrema salsugineum HOM05D004081 ORTHO05D004935 4.4e-34 149.1 343 32.4
THA.LOC104799704 Tarenaya hassleriana HOM05D004081 ORTHO05D004935 1.7e-33 147.1 321 34.0
BcaB04g19768 Brassica carinata HOM05D004081 ORTHO05D004935 2.2e-33 146.7 332 33.4
BolC2t11999H Brassica oleracea HOM05D004081 ORTHO05D004935 2.2e-33 146.7 335 33.1
MBI01_g30745_MAGBIO Magnolia biondii HOM05D004081 ORTHO05D004935 2.8e-33 146.4 293 37.2
DCAR_004492 Daucus carota HOM05D004081 ORTHO05D004935 3.7e-33 146.0 176 47.7
BcaC04g23588 Brassica carinata HOM05D004081 ORTHO05D004935 4.8e-33 145.6 332 32.5
AL6G37640 Arabidopsis lyrata HOM05D002708 ORTHO05D003516 1.8e-32 143.7 334 32.0
BolC9t53593H Brassica oleracea HOM05D004081 ORTHO05D004935 1.8e-32 143.7 333 31.8
Carub.0006s2355 Capsella rubella HOM05D004081 ORTHO05D004935 1.8e-32 143.7 340 31.2
BcaC03g17893 Brassica carinata HOM05D004081 ORTHO05D004935 2.4e-32 143.3 333 32.4
Psat5g023440 Pisum sativum HOM05D004081 ORTHO05D004935 3.1e-32 142.9 336 33.6
Dinv30265 Davidia involucrata HOM05D004081 ORTHO05D004935 4.1e-32 142.5 175 49.1
Lsat_1_v5_gn_8_104461 Lactuca sativa HOM05D004081 ORTHO05D004935 4.1e-32 142.5 326 35.6
BcaB07g29982 Brassica carinata HOM05D004081 ORTHO05D004935 7.0e-32 141.7 334 31.1
Aa31LG11G4780 Aethionema arabicum HOM05D004081 ORTHO05D004935 1.6e-31 140.6 341 33.1
SHI18658 Sapria himalayana HOM05D004081 ORTHO05D004935 1.6e-31 140.6 273 37.7
ATR0121G001 Amborella trichopoda HOM05D004081 ORTHO05D004935 7.7e-31 138.3 266 38.0
AT5G25770 Arabidopsis thaliana HOM05D004081 ORTHO05D004935 7.7e-31 138.3 341 30.5
THA.LOC104815055 Tarenaya hassleriana HOM05D004081 ORTHO05D004935 1.3e-30 137.5 331 31.1
Psat5g023320 Pisum sativum HOM05D004081 ORTHO05D004935 2.9e-30 136.3 308 34.1
BolC2t12002H Brassica oleracea HOM05D004081 ORTHO05D004935 5.0e-30 135.6 330 31.5
Sp2g21850 Schrenkiella parvula HOM05D004081 ORTHO05D004935 6.5e-30 135.2 340 30.9
FAN15G1869 Fragaria x ananassa HOM05D004081 ORTHO05D004935 8.5e-30 134.8 182 45.1
Lsat_1_v5_gn_8_104541 Lactuca sativa HOM05D004081 ORTHO05D004935 8.5e-30 134.8 330 33.3
Lsat_1_v5_gn_8_104800 Lactuca sativa HOM05D004081 ORTHO05D004935 1.5e-29 134.0 226 38.9
Lalb_Chr08g0243191 Lupinus albus HOM05D004081 ORTHO05D004935 1.9e-29 133.7 239 37.2
Aa31LG11G4770 Aethionema arabicum HOM05D004081 ORTHO05D004935 3.2e-29 132.9 344 31.1
Eucgr.L00922 Eucalyptus grandis HOM05D004081 ORTHO05D004935 7.2e-29 131.7 174 45.4
Lsat_1_v5_gn_8_134220 Lactuca sativa HOM05D004081 ORTHO05D004935 9.5e-29 131.3 338 31.7
CANSAT25G3157 Cannabis sativa HOM05D004081 ORTHO05D004935 6.1e-28 128.6 176 44.3
A09p06100 Brassica napus HOM05D004081 ORTHO05D004935 1.4e-27 127.5 237 35.9
BcaC04g23590 Brassica carinata HOM05D004081 ORTHO05D004935 4.0e-27 125.9 317 31.9
Glyma.06G083000 Glycine max HOM05D004081 ORTHO05D004935 6.8e-27 125.2 294 33.0
HPP92_021511 Vanilla planifolia HOM05D004081 ORTHO05D004935 8.8e-27 124.8 133 53.4
Zm00001eb271420 Zea mays HOM05D004081 ORTHO05D004935 8.8e-27 124.8 185 40.5
Lsat_1_v5_gn_8_104201 Lactuca sativa HOM05D004081 ORTHO05D004935 9.8e-26 121.3 280 35.7
VMungo0768G0001 Vigna mungo HOM05D004081 ORTHO05D004935 2.8e-25 119.8 336 28.6
Cpa.g.sc7.252 Carica papaya HOM05D004081 ORTHO05D004935 4.9e-25 119.0 175 41.7
CAN.G21.41 Capsicum annuum HOM05D004081 ORTHO05D004935 6.3e-25 118.6 192 43.2
BolC2t12001H Brassica oleracea HOM05D004081 ORTHO05D004935 3.1e-24 116.3 231 34.2
BcaC03g17895 Brassica carinata HOM05D004081 ORTHO05D004935 2.3e-22 110.2 276 32.6
Phvul.009G105800 Phaseolus vulgaris HOM05D004081 ORTHO05D004935 8.6e-22 108.2 363 26.2
Actinidia13318 Actinidia chinensis HOM05D004081 ORTHO05D004935 1.1e-21 107.8 226 35.8
ATR0315G111 Amborella trichopoda HOM05D004081 ORTHO05D004935 2.5e-21 106.7 175 41.7
Phvul.009G107301 Phaseolus vulgaris HOM05D004081 ORTHO05D004935 1.4e-19 100.9 238 29.8
CSS0028651 Camellia sinensis var. sinensis HOM05D004081 ORTHO05D004935 6.8e-19 98.6 73 72.6
THA.LOC104809696 Tarenaya hassleriana HOM05D004081 ORTHO05D004935 8.9e-19 98.2 174 37.9
CSS0013583 Camellia sinensis var. sinensis HOM05D004081 ORTHO05D004935 4.4e-18 95.9 80 66.2
AagrBONN_evm.TU.Sc2ySwM_228.1948 Anthoceros agrestis HOM05D004081 ORTHO05D004935 8.3e-17 91.7 236 31.4
Mapoly0161s0002 Marchantia polymorpha HOM05D004081 ORTHO05D004935 9.2e-16 88.2 238 30.7
Glyma.04G081600 Glycine max HOM05D004081 ORTHO05D004935 3.5e-15 86.3 191 33.0
Atru.chr7.2142 Acer truncatum HOM05D004081 ORTHO05D004935 3.0e-14 83.2 116 40.5
SMO089G0019 Selaginella moellendorffii HOM05D004081 ORTHO05D004935 3.0e-14 83.2 236 28.4
Hund03408 Selenicereus undatus HOM05D004081 ORTHO05D004935 3.0e-14 83.2 113 46.0
SEGI_32132 Sequoiadendron giganteum HOM05D004081 ORTHO05D004935 6.6e-14 82.0 189 32.8
Lsat_1_v5_gn_0_34401 Lactuca sativa HOM05D004081 ORTHO05D004935 1.1e-13 81.3 103 54.4
Oeu014640.1 Olea europaea HOM05D004081 ORTHO05D025646 2.1e-12 77.0 54 64.8
Duzib168G0602 Durio zibethinus HOM05D004081 ORTHO05D004935 1.8e-11 73.9 148 37.8
Medtr3g110115 Medicago truncatula HOM05D004081 ORTHO05D004935 1.5e-10 70.9 141 36.9
BcaB05g25303 Brassica carinata HOM05D004081 ORTHO05D004935 1.1e-08 64.7 67 53.7
HPP92_021483 Vanilla planifolia HOM05D004081 ORTHO05D004935 2.7e-07 60.1 63 46.0
AL6G37600 Arabidopsis lyrata HOM05D004081 ORTHO05D004935 4.6e-07 59.3 67 41.8
Atru.chr7.2143 Acer truncatum HOM05D004081 ORTHO05D004935 2.3e-06 57.0 36 72.2
Ciclev10010051m.g Citrus clementina HOM05D004081 ORTHO05D004935 6.6e-06 55.5 53 50.9


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