Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000506g0030 Nicotiana tabacum HOM05D007047 ORTHO05D009177 1.6e-299 1031.9 520 100.0
Nitab4.5_0006375g0010 Nicotiana tabacum HOM05D007047 ORTHO05D009177 1.7e-232 809.3 466 89.1
PGSC0003DMG400024159 Solanum tuberosum HOM05D007047 ORTHO05D009177 2.3e-200 702.6 499 75.4
Solyc06g060860.2 Solanum lycopersicum HOM05D007047 ORTHO05D009177 2.0e-188 662.9 501 71.7
Sopen06g021010 Solanum pennellii HOM05D007047 ORTHO05D009177 2.9e-187 659.1 499 71.7
CAN.G62.14 Capsicum annuum HOM05D007047 ORTHO05D009177 1.8e-165 586.6 419 75.7
Peaxi162Scf00190g01213 Petunia axillaris HOM05D007047 ORTHO05D009177 1.6e-116 424.1 479 52.6
Dinv28849 Davidia involucrata HOM05D007047 ORTHO05D006202 5.9e-47 193.0 474 36.9
Hma1.2p1_0821F.1_g224180 Hydrangea macrophylla HOM05D007047 ORTHO05D009177 9.0e-40 169.1 506 32.0
Oeu045687.1 Olea europaea HOM05D007047 ORTHO05D009177 1.9e-37 161.4 516 32.2
QL12p009685 Quercus lobata HOM05D007047 ORTHO05D009177 2.3e-35 154.5 556 29.7
Thecc.03G244500 Theobroma cacao HOM05D007047 ORTHO05D009177 1.1e-34 152.1 542 29.5
QL12p009257 Quercus lobata HOM05D007047 ORTHO05D009177 6.3e-33 146.4 556 29.1
Oeu045675.1 Olea europaea HOM05D007047 ORTHO05D009177 1.0e-30 139.0 346 33.5
CiPaw.12G048400 Carya illinoinensis HOM05D007047 ORTHO05D009177 6.5e-30 136.3 530 28.3
COL.COLO4_10022 Corchorus olitorius HOM05D007047 ORTHO05D009177 1.9e-29 134.8 527 28.5
Haze_07962 Corylus avellana HOM05D007047 ORTHO05D009177 2.5e-29 134.4 428 29.0
Actinidia31505 Actinidia chinensis HOM05D007047 ORTHO05D006202 4.2e-29 133.7 513 30.8
Potri.003G080700 Populus trichocarpa HOM05D007047 ORTHO05D009177 7.2e-29 132.9 547 28.7
SGA_v2.0_scaffold104G30204 Striga asiatica HOM05D007047 ORTHO05D009177 9.4e-29 132.5 456 31.8
Prupe.4G179300 Prunus persica HOM05D007047 ORTHO05D009177 2.1e-28 131.3 497 28.4
FvH4_2g33151 Fragaria vesca HOM05D007047 ORTHO05D009177 1.4e-27 128.6 561 27.6
Manes.02G042900 Manihot esculenta HOM05D007047 ORTHO05D009177 1.4e-27 128.6 544 30.1
Atru.chr9.1243 Acer truncatum HOM05D007047 ORTHO05D009177 1.8e-27 128.3 526 29.8
Ciclev10024423m.g Citrus clementina HOM05D007047 ORTHO05D009177 1.8e-27 128.3 508 28.3
CSS0008245 Camellia sinensis var. sinensis HOM05D007047 ORTHO05D009177 2.3e-27 127.9 443 31.6
PGR031G1177 Punica granatum HOM05D007047 ORTHO05D009177 3.0e-27 127.5 540 28.0
GSVIVG01004793001 Vitis vinifera HOM05D000549 ORTHO05D006202 1.5e-26 125.2 343 33.5
Sabra03G0052300 Salix brachista HOM05D007047 ORTHO05D009177 2.0e-26 124.8 551 27.9
DCAR_000643 Daucus carota HOM05D007047 ORTHO05D009177 4.4e-26 123.6 560 27.9
Carub.0007s2455 Capsella rubella HOM05D007047 ORTHO05D009177 5.7e-26 123.2 499 28.7
Dinv39189 Davidia involucrata HOM05D000549 ORTHO05D006202 2.2e-25 121.3 240 38.3
SalBow6G1440 Salvia bowleyana HOM05D007047 ORTHO05D009177 1.1e-24 119.0 442 30.3
FAN24G2075 Fragaria x ananassa HOM05D007047 ORTHO05D009177 2.4e-24 117.9 453 29.4
ClCG10G002400 Citrullus lanatus HOM05D007047 ORTHO05D009177 5.3e-24 116.7 435 29.7
FAN04G0327 Fragaria x ananassa HOM05D007047 ORTHO05D009177 5.3e-24 116.7 582 27.5
FAN08G2081 Fragaria x ananassa HOM05D007047 ORTHO05D009177 5.3e-24 116.7 560 27.7
TAR375G0331 Trochodendron aralioides HOM05D007047 ORTHO05D009177 2.0e-23 114.8 340 32.6
Duzib205G0846 Durio zibethinus HOM05D007047 ORTHO05D009177 2.6e-23 114.4 457 29.3
Migut.A01028 Erythranthe guttata HOM05D007047 ORTHO05D009177 5.9e-23 113.2 424 31.1
MELO3C013912.2 Cucumis melo HOM05D007047 ORTHO05D009177 1.3e-22 112.1 440 29.5
CsaV3_3G002430 Cucumis sativus L. HOM05D007047 ORTHO05D009177 1.3e-22 112.1 443 30.2
MSTRG.25515 Avicennia marina HOM05D007047 ORTHO05D009177 2.2e-22 111.3 478 28.0
Ca_24599_v3 Cicer arietinum L. HOM05D007047 ORTHO05D009177 2.2e-22 111.3 495 29.1
MD06G1050900 Malus domestica HOM05D007047 ORTHO05D009177 5.0e-22 110.2 556 25.9
Glyma.01G206100 Glycine max HOM05D007047 ORTHO05D009177 8.5e-22 109.4 493 27.0
Rhsim07G0117200 Rhododendron simsii HOM05D007047 ORTHO05D009177 8.5e-22 109.4 433 29.3
FAN20G0731 Fragaria x ananassa HOM05D007047 ORTHO05D009177 1.1e-21 109.0 333 31.5
TPR.G17974 Trifolium pratense HOM05D007047 ORTHO05D009177 1.9e-21 108.2 486 26.3
Lalb_Chr16g0379431 Lupinus albus HOM05D007047 ORTHO05D009177 4.2e-21 107.1 426 31.2
Hund11335 Selenicereus undatus HOM05D007047 ORTHO05D009177 4.2e-21 107.1 451 26.8
THA.LOC104807915 Tarenaya hassleriana HOM05D007047 ORTHO05D009177 9.4e-21 105.9 514 27.4
Gorai.004G194800 Gossypium raimondii HOM05D007047 ORTHO05D009177 1.2e-20 105.5 515 26.6
Rhsim07G0117500 Rhododendron simsii HOM05D007047 ORTHO05D009177 1.6e-20 105.1 373 30.3
RcHm_v2.0_Chr7g0204751 Rosa chinensis HOM05D007047 ORTHO05D009177 3.6e-20 104.0 444 28.6
Gohir.A08G166600 Gossypium hirsutum HOM05D007047 ORTHO05D009177 1.0e-19 102.4 510 27.1
Phvul.002G000400 Phaseolus vulgaris HOM05D007047 ORTHO05D009177 1.0e-19 102.4 489 27.6
Psat2g177160 Pisum sativum HOM05D007047 ORTHO05D009177 1.0e-19 102.4 488 25.8
A08p12720 Brassica napus HOM05D007047 ORTHO05D006202 2.3e-19 101.3 501 28.1
PSO063G2347 Papaver somniferum HOM05D007047 ORTHO05D009177 3.0e-19 100.9 487 27.7
Lj2g0019775 Lotus japonicus HOM05D007047 ORTHO05D009177 6.7e-19 99.8 356 30.6
Nn6g33825 Nelumbo nucifera HOM05D007047 ORTHO05D009177 1.2e-18 99.0 338 30.8
Sp7g17290 Schrenkiella parvula HOM05D007047 ORTHO05D009177 1.2e-18 99.0 509 25.7
AUR62006813 Chenopodium quinoa HOM05D007047 ORTHO05D009177 2.0e-18 98.2 539 26.7
TWI60G0889 Tripterygium wilfordii HOM05D007047 ORTHO05D009177 2.6e-18 97.8 540 25.9
BraA08t33261Z Brassica rapa HOM05D007047 ORTHO05D009177 1.3e-17 95.5 502 26.7
VMungo1215G0554 Vigna mungo HOM05D002164 ORTHO05D002267 1.7e-17 95.1 490 27.6
CSS0009500 Camellia sinensis var. sinensis HOM05D007047 ORTHO05D009177 3.7e-17 94.0 423 29.1
Medtr5g013140 Medicago truncatula HOM05D007047 ORTHO05D009177 4.8e-17 93.6 481 26.2
AL7G37840 Arabidopsis lyrata HOM05D007047 ORTHO05D009177 6.3e-17 93.2 486 26.3
Cc08_g11870 Coffea canephora HOM05D000549 ORTHO05D006202 6.3e-17 93.2 171 39.8
FAN27G3081 Fragaria x ananassa HOM05D007047 ORTHO05D009177 6.3e-17 93.2 334 29.6
Ciclev10019636m.g Citrus clementina HOM05D000549 ORTHO05D006202 1.8e-16 91.7 251 33.5
Ah.10g026860 Amaranthus hybridus HOM05D007047 ORTHO05D009177 2.4e-16 91.3 455 26.2
arahy.Tifrunner.gnm1.ann1.J4EMKX Arachis hypogaea HOM05D007047 ORTHO05D009177 2.4e-16 91.3 488 26.2
arahy.Tifrunner.gnm1.ann1.XH35PM Arachis hypogaea HOM05D007047 ORTHO05D009177 2.4e-16 91.3 488 26.2
CANSAT21G2499 Cannabis sativa HOM05D007047 ORTHO05D009177 2.4e-16 91.3 508 28.1
Cpa.g.sc559.1 Carica papaya HOM05D007047 ORTHO05D009177 2.4e-16 91.3 333 27.6
BolC8t48412H Brassica oleracea HOM05D007047 ORTHO05D009177 4.1e-16 90.5 502 26.7
AT4G16807 Arabidopsis thaliana HOM05D007047 ORTHO05D009177 2.0e-15 88.2 484 24.4
Eucgr.D02116 Eucalyptus grandis HOM05D007047 ORTHO05D009177 2.9e-14 84.3 322 29.2
Sed0008627 Sechium edule HOM05D007047 ORTHO05D009177 8.5e-14 82.8 329 28.6
BcaC07g38023 Brassica carinata HOM05D007047 ORTHO05D009177 1.5e-13 82.0 503 26.2
CAN.G62.13 Capsicum annuum HOM05D007047 ORTHO05D009177 1.5e-13 82.0 94 51.1
CARHR223430 Cardamine hirsuta HOM05D007047 ORTHO05D009177 3.2e-13 80.9 520 25.8
AUR62000471 Chenopodium quinoa HOM05D007047 ORTHO05D009177 4.2e-13 80.5 487 25.5
Gohir.D08G185400 Gossypium hirsutum HOM05D007047 ORTHO05D009177 1.6e-12 78.6 221 33.0
Nitab4.5_0002358g0010 Nicotiana tabacum HOM05D002030 ORTHO05D007413 2.1e-12 78.2 49 81.6
EL10Ac4g09553 Beta vulgaris HOM05D007047 ORTHO05D009177 3.6e-12 77.4 432 26.4
BcaB04g18396 Brassica carinata HOM05D007047 ORTHO05D006202 4.7e-12 77.0 515 25.0
Aqoxy3G02722 Aquilegia oxysepala HOM05D007047 ORTHO05D009177 1.0e-11 75.9 423 25.5
ECA240G0572 Erigeron canadensis HOM05D007047 ORTHO05D009177 1.0e-11 75.9 367 26.4
unitig_744.g24476 Utricularia gibba HOM05D007047 ORTHO05D009177 8.8e-11 72.8 328 25.0
Thhalv10027153m.g Eutrema salsugineum HOM05D007047 ORTHO05D009177 2.0e-10 71.6 432 24.3
Aa31LG2G12990 Aethionema arabicum HOM05D007047 ORTHO05D009177 1.3e-09 68.9 495 22.8
HPP92_022107 Vanilla planifolia HOM05D007047 ORTHO05D009177 2.2e-09 68.2 138 37.0
Lsat_1_v5_gn_4_126100 Lactuca sativa HOM05D007047 ORTHO05D009177 4.1e-08 63.9 329 28.0
Medtr5g013080 Medicago truncatula HOM05D007047 ORTHO05D009177 4.5e-07 60.5 50 58.0
Os11g0249300 Oryza sativa ssp. japonica HOM05D007047 ORTHO05D009177 3.8e-06 57.4 400 22.2
Zm00001eb428340 Zea mays HOM05D007047 ORTHO05D009177 6.5e-06 56.6 412 24.0


User provided reference genes

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