Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000505g0050 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.4e-78 295.0 160 100.0
Nitab4.5_0008583g0030 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.9e-34 148.7 142 66.2
Nitab4.5_0000392g0110 Nicotiana tabacum HOM05D003106 ORTHO05D004173 6.2e-32 141.4 144 61.8
Nitab4.5_0011274g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 4.0e-31 138.7 146 58.9
Nitab4.5_0001167g0050 Nicotiana tabacum HOM05D003106 ORTHO05D004173 5.3e-31 138.3 133 61.7
Nitab4.5_0000561g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.0e-30 136.3 136 58.1
Nitab4.5_0005263g0070 Nicotiana tabacum HOM05D003106 ORTHO05D004173 9.9e-30 134.0 139 56.8
Nitab4.5_0009254g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 9.9e-30 134.0 160 53.1
Nitab4.5_0015674g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 9.9e-30 134.0 159 52.2
Nitab4.5_0006716g0030 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.8e-29 132.1 133 58.6
Nitab4.5_0009163g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.4e-28 130.2 159 51.6
Nitab4.5_0007408g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 9.3e-28 127.5 180 46.7
Nitab4.5_0002812g0060 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.1e-27 126.3 150 52.0
Nitab4.5_0000970g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.5e-27 125.6 159 49.7
Nitab4.5_0009730g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.3e-26 123.6 148 52.0
Nitab4.5_0006358g0070 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.8e-26 123.2 199 42.2
Nitab4.5_0012463g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.8e-26 123.2 155 50.3
Nitab4.5_0024979g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.0e-26 122.5 126 57.1
Nitab4.5_0004067g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.9e-26 122.1 153 49.0
Nitab4.5_0010666g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 8.7e-26 120.9 172 45.9
Nitab4.5_0000483g0210 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.5e-25 119.4 156 52.6
Nitab4.5_0002227g0030 Nicotiana tabacum HOM05D003106 ORTHO05D004173 5.6e-25 118.2 140 52.9
Nitab4.5_0002080g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 7.4e-25 117.9 104 60.6
Nitab4.5_0006406g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 7.4e-25 117.9 162 46.9
Nitab4.5_0011105g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 9.6e-25 117.5 86 76.7
Nitab4.5_0004198g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.3e-24 117.1 129 53.5
Nitab4.5_0007731g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.6e-24 116.7 163 47.9
Nitab4.5_0000619g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.7e-24 115.5 151 49.7
Nitab4.5_0000853g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.4e-23 112.8 141 48.2
Nitab4.5_0001222g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 4.0e-23 112.1 108 60.2
Nitab4.5_0005146g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.2e-22 110.5 102 60.8
Nitab4.5_0008044g0050 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.5e-22 110.2 148 49.3
Nitab4.5_0003361g0060 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.6e-22 109.4 142 47.9
Nitab4.5_0006958g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.6e-22 109.4 87 64.4
Nitab4.5_0007874g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.6e-22 109.4 85 64.7
Nitab4.5_0008221g0070 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.6e-22 109.4 141 50.4
Nitab4.5_0009941g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.6e-22 109.4 97 60.8
Nitab4.5_0000561g0050 Nicotiana tabacum HOM05D003106 ORTHO05D004173 4.5e-22 108.6 92 64.1
Nitab4.5_0004031g0030 Nicotiana tabacum HOM05D003106 ORTHO05D004173 5.8e-22 108.2 127 53.5
Nitab4.5_0007408g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 5.8e-22 108.2 97 60.8
Nitab4.5_0027224g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.3e-21 107.1 145 49.0
Nitab4.5_0008044g0060 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.7e-21 106.7 191 41.9
Nitab4.5_0008400g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 4.9e-21 105.1 91 63.7
Nitab4.5_0000265g0060 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.1e-20 104.0 85 67.1
Nitab4.5_0002557g0060 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.1e-20 104.0 139 50.4
Nitab4.5_0003816g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.1e-20 104.0 142 46.5
Nitab4.5_0013192g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.1e-20 104.0 96 56.2
Nitab4.5_0002681g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.4e-20 103.6 145 46.9
Nitab4.5_0000504g0080 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.5e-20 102.8 124 52.4
Nitab4.5_0009904g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.5e-20 102.8 149 47.0
Nitab4.5_0007408g0030 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.2e-20 102.4 150 47.3
Nitab4.5_0000696g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 4.2e-20 102.1 163 42.9
Nitab4.5_0016089g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 4.2e-20 102.1 142 47.9
Nitab4.5_0001093g0030 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.2e-19 100.5 106 54.7
Nitab4.5_0006693g0070 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.2e-19 100.5 132 51.5
Nitab4.5_0001167g0060 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.6e-19 100.1 129 47.3
Nitab4.5_0007692g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.6e-19 100.1 115 53.9
Nitab4.5_0001573g0030 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.1e-19 99.8 131 47.3
Nitab4.5_0002080g0070 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.1e-19 99.8 86 61.6
Nitab4.5_0019730g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.1e-19 99.8 132 48.5
Nitab4.5_0001025g0050 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.7e-19 99.4 97 53.6
Nitab4.5_0007874g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.5e-19 99.0 115 53.0
Nitab4.5_0016808g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 4.6e-19 98.6 142 45.8
Nitab4.5_0001881g0090 Nicotiana tabacum HOM05D003106 ORTHO05D004173 7.9e-19 97.8 131 47.3
Nitab4.5_0000979g0030 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.0e-18 97.4 140 45.7
Nitab4.5_0023064g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.0e-18 97.4 131 51.1
Nitab4.5_0005663g0060 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.3e-18 97.1 107 57.9
Nitab4.5_0010005g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.3e-18 97.1 151 47.7
Nitab4.5_0001163g0090 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.8e-18 96.7 92 60.9
Nitab4.5_0003707g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.9e-18 95.5 74 68.9
Nitab4.5_0004354g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.9e-18 95.5 90 56.7
Nitab4.5_0007510g0030 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.9e-18 95.5 137 45.3
Nitab4.5_0012357g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 5.1e-18 95.1 126 46.8
Nitab4.5_0000483g0200 Nicotiana tabacum HOM05D003106 ORTHO05D004173 6.7e-18 94.7 80 66.2
Nitab4.5_0001208g0050 Nicotiana tabacum HOM05D003106 ORTHO05D004173 8.7e-18 94.4 122 46.7
Nitab4.5_0013502g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.5e-17 93.6 102 53.9
Nitab4.5_0002080g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 7.4e-17 91.3 91 63.7
Nitab4.5_0000565g0220 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.6e-16 90.1 139 41.7
Nitab4.5_0007731g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.1e-16 89.7 131 44.3
Nitab4.5_0000664g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 6.2e-16 88.2 130 40.8
Nitab4.5_0007408g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.1e-15 87.4 87 57.5
Nitab4.5_0003808g0100 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.8e-15 86.7 60 75.0
Nitab4.5_0000619g0050 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.4e-15 86.3 110 51.8
Nitab4.5_0003242g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.4e-15 86.3 112 50.9
Nitab4.5_0005146g0070 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.4e-15 86.3 97 53.6
Nitab4.5_0007731g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 4.0e-15 85.5 86 57.0
Nitab4.5_0016539g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 4.0e-15 85.5 86 58.1
Nitab4.5_0000853g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 6.9e-15 84.7 77 59.7
Nitab4.5_0000065g0140 Nicotiana tabacum HOM05D003106 ORTHO05D004173 9.0e-15 84.3 175 36.6
Nitab4.5_0000157g0210 Nicotiana tabacum HOM05D003106 ORTHO05D004173 9.0e-15 84.3 135 43.0
Nitab4.5_0000670g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 9.0e-15 84.3 64 73.4
Nitab4.5_0004671g0030 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.5e-14 83.6 165 37.0
Nitab4.5_0003936g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.0e-14 83.2 141 41.1
Nitab4.5_0001167g0070 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.4e-14 82.4 270 29.3
Nitab4.5_0009730g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 4.5e-14 82.0 128 43.0
PGSC0003DMG400045301 Solanum tuberosum HOM05D003106 ORTHO05D013353 7.6e-14 81.3 98 50.0
Nitab4.5_0000770g0080 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.3e-13 80.5 142 45.1
Nitab4.5_0002006g0050 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.3e-13 80.5 87 56.3
Nitab4.5_0005350g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.3e-13 80.5 150 40.0
Nitab4.5_0009941g0030 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.7e-13 80.1 100 50.0
Nitab4.5_0000441g0060 Nicotiana tabacum HOM05D003106 ORTHO05D000002 2.9e-13 79.3 65 66.2
PGSC0003DMG400046927 Solanum tuberosum HOM05D003106 ORTHO05D013353 2.9e-13 79.3 107 49.5
Nitab4.5_0001013g0050 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.8e-13 79.0 124 44.4
Nitab4.5_0007731g0030 Nicotiana tabacum HOM05D003106 ORTHO05D004173 6.5e-13 78.2 126 42.1
PGSC0003DMG400011764 Solanum tuberosum HOM05D003106 ORTHO05D013353 1.1e-12 77.4 154 35.7
Nitab4.5_0000145g0240 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.5e-12 76.3 146 38.4
Nitab4.5_0013420g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.5e-12 76.3 142 41.5
PGSC0003DMG400043161 Solanum tuberosum HOM05D003106 ORTHO05D013353 2.5e-12 76.3 152 39.5
Nitab4.5_0000619g0060 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.2e-12 75.9 52 78.8
PGSC0003DMG400044117 Solanum tuberosum HOM05D003106 ORTHO05D013353 3.2e-12 75.9 108 47.2
Nitab4.5_0010080g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 4.2e-12 75.5 64 62.5
PGSC0003DMG400013072 Solanum tuberosum HOM05D003106 ORTHO05D013353 4.2e-12 75.5 106 43.4
Nitab4.5_0000002g0370 Nicotiana tabacum HOM05D003106 ORTHO05D004173 5.5e-12 75.1 71 57.7
Nitab4.5_0000113g0120 Nicotiana tabacum HOM05D003106 ORTHO05D004173 5.5e-12 75.1 98 42.9
Nitab4.5_0000670g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 5.5e-12 75.1 84 52.4
Nitab4.5_0000067g0080 Nicotiana tabacum HOM05D003106 ORTHO05D004173 9.3e-12 74.3 95 46.3
Nitab4.5_0000606g0090 Nicotiana tabacum HOM05D003106 ORTHO05D004173 9.3e-12 74.3 105 41.9
Nitab4.5_0008981g0070 Nicotiana tabacum HOM05D003106 ORTHO05D004173 9.3e-12 74.3 59 69.5
Solyc01g057707.1 Solanum lycopersicum HOM05D003106 ORTHO05D004173 1.2e-11 73.9 113 40.7
PGSC0003DMG400034733 Solanum tuberosum HOM05D003106 ORTHO05D013353 1.2e-11 73.9 125 43.2
Nitab4.5_0002812g0070 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.1e-11 73.2 124 42.7
Nitab4.5_0006247g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.1e-11 73.2 132 37.1
Nitab4.5_0009941g0050 Nicotiana tabacum HOM05D003106 ORTHO05D004173 4.6e-11 72.0 141 37.6
Nitab4.5_0006958g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 6.1e-11 71.6 77 58.4
Nitab4.5_0020624g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 6.1e-11 71.6 53 71.7
Nitab4.5_0000039g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.8e-10 70.1 140 32.1
Sopen02g006680 Solanum pennellii HOM05D003106 ORTHO05D004173 1.8e-10 70.1 140 35.7
Nitab4.5_0000032g0280 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.3e-10 69.7 77 50.6
Nitab4.5_0010589g0030 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.3e-10 69.7 63 60.3
Nitab4.5_0010129g0030 Nicotiana tabacum HOM05D003106 ORTHO05D004173 5.1e-10 68.6 40 87.5
PGSC0003DMG400043545 Solanum tuberosum HOM05D003106 ORTHO05D013353 5.1e-10 68.6 107 42.1
Nitab4.5_0002615g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 8.7e-10 67.8 137 38.7
Nitab4.5_0005054g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.1e-09 67.4 103 45.6
PGSC0003DMG400043166 Solanum tuberosum HOM05D003106 ORTHO05D013353 1.1e-09 67.4 108 41.7
Nitab4.5_0001674g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 4.3e-09 65.5 86 47.7
PGSC0003DMG400042117 Solanum tuberosum HOM05D003106 ORTHO05D013353 1.3e-08 63.9 108 40.7
Nitab4.5_0000777g0070 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.8e-08 62.8 104 42.3
PGSC0003DMG400034903 Solanum tuberosum HOM05D003106 ORTHO05D013353 3.7e-08 62.4 125 36.0
Nitab4.5_0010589g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 4.8e-08 62.0 81 46.9
Nitab4.5_0008400g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 6.3e-08 61.6 88 44.3
Nitab4.5_0003077g0070 Nicotiana tabacum HOM05D003106 ORTHO05D004173 8.2e-08 61.2 117 35.9
PGSC0003DMG400011661 Solanum tuberosum HOM05D003106 ORTHO05D013353 8.2e-08 61.2 68 51.5
Nitab4.5_0009941g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.4e-07 60.5 51 64.7
Nitab4.5_0009240g0020 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.8e-07 60.1 84 46.4
Nitab4.5_0001417g0130 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.4e-07 59.7 127 36.2
Nitab4.5_0006091g0040 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.1e-07 59.3 111 38.7
Nitab4.5_0001482g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 1.2e-06 57.4 46 63.0
Nitab4.5_0001831g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.0e-06 56.6 141 34.0
Nitab4.5_0003713g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 3.4e-06 55.8 69 42.0
Nitab4.5_0017834g0010 Nicotiana tabacum HOM05D003106 ORTHO05D004173 5.9e-06 55.1 67 47.8


User provided reference genes

Program Settings