Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000504g0030 Nicotiana tabacum HOM05D002211 ORTHO05D002206 4.1e-77 291.2 135 100.0
Nitab4.5_0004201g0020 Nicotiana tabacum HOM05D002211 ORTHO05D002206 2.6e-71 271.9 153 85.6
Peaxi162Scf00071g00139 Petunia axillaris HOM05D002211 ORTHO05D002206 5.4e-45 184.5 164 62.8
Solyc04g050790.3 Solanum lycopersicum HOM05D002211 ORTHO05D002206 5.8e-31 137.9 158 57.0
PGSC0003DMG400004509 Solanum tuberosum HOM05D002211 ORTHO05D002206 9.9e-31 137.1 153 57.5
Sopen04g021740 Solanum pennellii HOM05D002211 ORTHO05D002206 1.9e-29 132.9 153 56.2
CiPaw.07G075600 Carya illinoinensis HOM05D002211 ORTHO05D002206 1.4e-21 106.7 161 42.2
MSTRG.8176 Avicennia marina HOM05D002211 ORTHO05D002206 1.9e-18 96.3 172 34.9
MSTRG.9225 Avicennia marina HOM05D002211 ORTHO05D002206 1.9e-18 96.3 182 36.3
QL01p047517 Quercus lobata HOM05D002211 ORTHO05D002206 3.3e-18 95.5 81 58.0
Oeu001241.1 Olea europaea HOM05D002211 ORTHO05D002206 4.3e-18 95.1 163 39.9
Migut.F02065 Erythranthe guttata HOM05D002211 ORTHO05D002206 3.6e-17 92.0 180 37.8
Dinv10852 Davidia involucrata HOM05D002211 ORTHO05D002206 6.2e-17 91.3 183 36.1
Haze_04489 Corylus avellana HOM05D002211 ORTHO05D002206 2.4e-16 89.4 163 37.4
Manes.08G147100 Manihot esculenta HOM05D002211 ORTHO05D002206 2.4e-16 89.4 73 61.6
Atru.chr2.1234 Acer truncatum HOM05D002211 ORTHO05D002206 6.9e-16 87.8 109 48.6
SGA_v2.0_scaffold13G06340 Striga asiatica HOM05D002211 ORTHO05D002206 1.5e-15 86.7 145 37.9
PGR142G0339 Punica granatum HOM05D002211 ORTHO05D002206 2.0e-15 86.3 180 36.1
Duzib106G0223 Durio zibethinus HOM05D002211 ORTHO05D002206 2.6e-15 85.9 175 38.9
Thecc.05G260900 Theobroma cacao HOM05D002211 ORTHO05D002206 5.8e-15 84.7 176 38.1
COL.COLO4_20545 Corchorus olitorius HOM05D002211 ORTHO05D002206 7.6e-15 84.3 103 49.5
Gorai.007G268900 Gossypium raimondii HOM05D002211 ORTHO05D002206 7.6e-15 84.3 108 48.1
Duzib128G1915 Durio zibethinus HOM05D002211 ORTHO05D002206 9.9e-15 84.0 98 52.0
Gohir.A11G241500 Gossypium hirsutum HOM05D002211 ORTHO05D002206 1.3e-14 83.6 186 37.1
Phvul.006G108100 Phaseolus vulgaris HOM05D002211 ORTHO05D002206 2.2e-14 82.8 138 38.4
Gohir.D11G250800 Gossypium hirsutum HOM05D002211 ORTHO05D002206 2.9e-14 82.4 97 52.6
RcHm_v2.0_Chr3g0448791 Rosa chinensis HOM05D002211 ORTHO05D002206 3.8e-14 82.0 178 38.2
SalBow1G6037 Salvia bowleyana HOM05D002211 ORTHO05D002206 3.8e-14 82.0 161 34.2
TWI60G0660 Tripterygium wilfordii HOM05D002211 ORTHO05D002206 3.8e-14 82.0 168 38.1
Duzib177G1183 Durio zibethinus HOM05D002211 ORTHO05D002206 4.9e-14 81.6 177 36.7
Potri.013G052600 Populus trichocarpa HOM05D002211 ORTHO05D002206 4.9e-14 81.6 114 45.6
MD12G1253400 Malus domestica HOM05D002211 ORTHO05D002206 6.4e-14 81.3 61 67.2
VMungo0540G2450 Vigna mungo HOM05D002211 ORTHO05D002206 6.4e-14 81.3 135 39.3
arahy.Tifrunner.gnm1.ann1.ML5U0X Arachis hypogaea HOM05D002211 ORTHO05D002206 8.4e-14 80.9 59 62.7
Prupe.6G355600 Prunus persica HOM05D002211 ORTHO05D002206 8.4e-14 80.9 113 45.1
Ciclev10022368m.g Citrus clementina HOM05D002211 ORTHO05D002206 1.1e-13 80.5 191 37.2
Eucgr.H04158 Eucalyptus grandis HOM05D002211 ORTHO05D002206 1.1e-13 80.5 152 37.5
FvH4_6g01210 Fragaria vesca HOM05D002211 ORTHO05D002206 1.1e-13 80.5 174 37.9
Psat0s3038g0080 Pisum sativum HOM05D002211 ORTHO05D002206 1.1e-13 80.5 151 37.7
CANSAT54G2545 Cannabis sativa HOM05D002211 ORTHO05D002206 1.4e-13 80.1 179 35.8
FAN05G1779 Fragaria x ananassa HOM05D002211 ORTHO05D002206 1.4e-13 80.1 174 37.9
FAN05G2499 Fragaria x ananassa HOM05D002211 ORTHO05D002206 1.4e-13 80.1 174 37.9
Psat3g005480 Pisum sativum HOM05D002211 ORTHO05D002206 1.9e-13 79.7 66 60.6
TWI32G0781 Tripterygium wilfordii HOM05D002211 ORTHO05D002206 1.9e-13 79.7 169 36.1
TPR.G4687 Trifolium pratense HOM05D002211 ORTHO05D002206 2.4e-13 79.3 162 35.2
Medtr7g116610 Medicago truncatula HOM05D002211 ORTHO05D002206 3.2e-13 79.0 157 35.7
Cpa.g.sc51.66 Carica papaya HOM05D002211 ORTHO05D002206 4.2e-13 78.6 166 36.7
Potri.015G040500 Populus trichocarpa HOM05D002211 ORTHO05D002206 5.5e-13 78.2 68 55.9
EL10Ac4g09798 Beta vulgaris HOM05D002211 ORTHO05D002206 7.1e-13 77.8 164 35.4
Ca_09451_v3 Cicer arietinum L. HOM05D002211 ORTHO05D002206 7.1e-13 77.8 62 62.9
FvH4_6g01200 Fragaria vesca HOM05D001040 ORTHO05D002795 9.3e-13 77.4 104 45.2
FAN05G1484 Fragaria x ananassa HOM05D002211 ORTHO05D002206 9.3e-13 77.4 104 45.2
Manes.09G144900 Manihot esculenta HOM05D002211 ORTHO05D002206 9.3e-13 77.4 78 52.6
Sabra13G0047200 Salix brachista HOM05D002211 ORTHO05D002206 1.2e-12 77.0 122 43.4
Glyma.03G253400 Glycine max HOM05D002211 ORTHO05D002206 1.6e-12 76.6 152 35.5
Hund07149 Selenicereus undatus HOM05D002211 ORTHO05D002206 1.6e-12 76.6 185 30.8
GSVIVG01026373001 Vitis vinifera HOM05D002211 ORTHO05D002206 1.6e-12 76.6 155 34.8
Glyma.19G250900 Glycine max HOM05D002211 ORTHO05D002206 2.7e-12 75.9 82 51.2
MD04G1235700 Malus domestica HOM05D002211 ORTHO05D002206 2.7e-12 75.9 123 39.8
Psat3g005600 Pisum sativum HOM05D002211 ORTHO05D002206 4.6e-12 75.1 65 55.4
Gohir.D08G053500 Gossypium hirsutum HOM05D002211 ORTHO05D002206 6.0e-12 74.7 58 60.3
Gorai.011G084500 Gossypium raimondii HOM05D002211 ORTHO05D002206 6.0e-12 74.7 58 60.3
Nn1g08275 Nelumbo nucifera HOM05D002211 ORTHO05D002206 6.0e-12 74.7 158 32.9
Gohir.D10G077733 Gossypium hirsutum HOM05D002211 ORTHO05D002206 7.9e-12 74.3 58 58.6
Gohir.D10G077875 Gossypium hirsutum HOM05D002211 ORTHO05D002206 1.0e-11 73.9 58 58.6
FAN09G3091 Fragaria x ananassa HOM05D002211 ORTHO05D002206 1.3e-11 73.6 83 48.2
Lj1g0002409 Lotus japonicus HOM05D002211 ORTHO05D002206 1.3e-11 73.6 131 35.1
SalBow1G4707 Salvia bowleyana HOM05D002211 ORTHO05D002206 1.3e-11 73.6 37 78.4
Gohir.D13G105700 Gossypium hirsutum HOM05D002211 ORTHO05D002206 1.8e-11 73.2 83 47.0
Gorai.013G118400 Gossypium raimondii HOM05D002211 ORTHO05D002206 1.8e-11 73.2 58 58.6
Gorai.013G198900 Gossypium raimondii HOM05D002211 ORTHO05D002206 2.3e-11 72.8 58 58.6
FAN02G1834 Fragaria x ananassa HOM05D002211 ORTHO05D002206 3.0e-11 72.4 78 51.3
Lalb_Chr04g0261851 Lupinus albus HOM05D002211 ORTHO05D002206 3.0e-11 72.4 159 32.7
Potri.019G029600 Populus trichocarpa HOM05D002211 ORTHO05D002206 3.0e-11 72.4 172 35.5
TAR362G0774 Trochodendron aralioides HOM05D002211 ORTHO05D002206 3.9e-11 72.0 162 35.2
Sabra19G0036300 Salix brachista HOM05D002211 ORTHO05D002206 5.1e-11 71.6 108 44.4
Sabra19G0039400 Salix brachista HOM05D002211 ORTHO05D002206 5.1e-11 71.6 108 44.4
TAR365G0725 Trochodendron aralioides HOM05D002211 ORTHO05D002206 5.1e-11 71.6 146 34.2
CsaV3_2G010180 Cucumis sativus L. HOM05D002211 ORTHO05D002206 6.7e-11 71.2 172 33.7
Psat0s3509g0040 Pisum sativum HOM05D002211 ORTHO05D002206 6.7e-11 71.2 168 33.3
vmacro10391 Vaccinium macrocarpon HOM05D002211 ORTHO05D002206 6.7e-11 71.2 49 65.3
Rhsim09G0131800 Rhododendron simsii HOM05D002211 ORTHO05D002206 8.7e-11 70.9 94 43.6
Actinidia38919 Actinidia chinensis HOM05D002211 ORTHO05D002206 1.1e-10 70.5 62 58.1
Gohir.A13G102400 Gossypium hirsutum HOM05D002211 ORTHO05D002206 1.1e-10 70.5 83 45.8
MD10G1152300 Malus domestica HOM05D002211 ORTHO05D002206 1.5e-10 70.1 150 33.3
Sc06g0005240 Simmondsia chinensis HOM05D002211 ORTHO05D002206 1.9e-10 69.7 59 54.2
Aqoxy5G00107 Aquilegia oxysepala HOM05D002211 ORTHO05D002206 2.5e-10 69.3 171 33.9
MBI07_g44687_MAGBIO Magnolia biondii HOM05D002211 ORTHO05D002206 2.5e-10 69.3 142 33.8
THA.LOC104827277 Tarenaya hassleriana HOM05D002211 ORTHO05D002206 2.5e-10 69.3 117 38.5
MELO3C008671.2 Cucumis melo HOM05D002211 ORTHO05D002206 4.3e-10 68.6 172 33.7
Aqoxy5G00111 Aquilegia oxysepala HOM05D002211 ORTHO05D002206 7.4e-10 67.8 158 33.5
BcaB08g36688 Brassica carinata HOM05D002211 ORTHO05D002206 9.6e-10 67.4 35 80.0
A10p21210 Brassica napus HOM05D002211 ORTHO05D002206 9.6e-10 67.4 35 80.0
C09p58640 Brassica napus HOM05D002211 ORTHO05D002206 9.6e-10 67.4 35 80.0
BolC9t58706H Brassica oleracea HOM05D002211 ORTHO05D002206 9.6e-10 67.4 35 80.0
BraA10t44184Z Brassica rapa HOM05D002211 ORTHO05D002206 9.6e-10 67.4 35 80.0
Eucgr.B02173 Eucalyptus grandis HOM05D002211 ORTHO05D002206 9.6e-10 67.4 187 29.4
MD05G1159900 Malus domestica HOM05D002211 ORTHO05D002206 9.6e-10 67.4 151 31.8
Cc09_g03180 Coffea canephora HOM05D002211 ORTHO05D002206 1.3e-09 67.0 46 63.0
Lalb_Chr02g0149321 Lupinus albus HOM05D002211 ORTHO05D002206 2.1e-09 66.2 36 72.2
COL.COLO4_38590 Corchorus olitorius HOM05D002211 ORTHO05D002206 2.8e-09 65.9 147 34.0
Haze_23452 Corylus avellana HOM05D002211 ORTHO05D002206 2.8e-09 65.9 151 35.1
Prupe.8G190600 Prunus persica HOM05D002211 ORTHO05D002206 2.8e-09 65.9 148 33.8
Glyma.03G089800 Glycine max HOM05D002211 ORTHO05D002206 3.7e-09 65.5 157 31.8
Glyma.13G008000 Glycine max HOM05D002211 ORTHO05D002206 3.7e-09 65.5 147 33.3
ClCG11G010190 Citrullus lanatus HOM05D002211 ORTHO05D002206 4.8e-09 65.1 78 47.4
Ciclev10017076m.g Citrus clementina HOM05D002211 ORTHO05D002206 4.8e-09 65.1 139 34.5
Lj3g0001912 Lotus japonicus HOM05D002211 ORTHO05D002206 4.8e-09 65.1 138 34.1
Thecc.01G211400 Theobroma cacao HOM05D002211 ORTHO05D002206 4.8e-09 65.1 146 33.6
AL6G29540 Arabidopsis lyrata HOM05D002211 ORTHO05D002206 8.2e-09 64.3 35 77.1
FvH4_2g17840 Fragaria vesca HOM05D002211 ORTHO05D002206 8.2e-09 64.3 152 34.2
FAN24G0249 Fragaria x ananassa HOM05D002211 ORTHO05D002206 8.2e-09 64.3 152 34.2
MBI07_g35241_MAGBIO Magnolia biondii HOM05D002211 ORTHO05D002206 8.2e-09 64.3 130 33.8
unitig_46.g18575 Utricularia gibba HOM05D002211 ORTHO05D002206 8.2e-09 64.3 33 75.8
DCAR_012692 Daucus carota HOM05D002211 ORTHO05D002206 1.1e-08 63.9 154 33.8
Actinidia34770 Actinidia chinensis HOM05D002211 ORTHO05D002206 1.4e-08 63.5 112 36.6
BraA02t05441Z Brassica rapa HOM05D002211 ORTHO05D002206 1.4e-08 63.5 35 74.3
Thhalv10014852m.g Eutrema salsugineum HOM05D002211 ORTHO05D002206 1.4e-08 63.5 35 74.3
RcHm_v2.0_Chr6g0282871 Rosa chinensis HOM05D002211 ORTHO05D002206 1.4e-08 63.5 150 32.0
PSO357G0293 Papaver somniferum HOM05D002211 ORTHO05D002206 1.8e-08 63.2 94 38.3
Sp6g26000 Schrenkiella parvula HOM05D002211 ORTHO05D002206 1.8e-08 63.2 155 32.3
Sed0010531 Sechium edule HOM05D002211 ORTHO05D002206 1.8e-08 63.2 88 43.2
PSO170G3935 Papaver somniferum HOM05D002211 ORTHO05D002206 2.4e-08 62.8 94 38.3
unitig_37.g12278 Utricularia gibba HOM05D002211 ORTHO05D002206 3.1e-08 62.4 33 75.8
Duzib138G0235 Durio zibethinus HOM05D002211 ORTHO05D002206 4.0e-08 62.0 147 33.3
BolC2t06888H Brassica oleracea HOM05D002211 ORTHO05D002206 5.3e-08 61.6 156 33.3
Manes.12G053700 Manihot esculenta HOM05D002211 ORTHO05D002206 5.3e-08 61.6 147 32.0
THA.LOC104820745 Tarenaya hassleriana HOM05D002211 ORTHO05D002206 5.3e-08 61.6 129 36.4
A02p04820 Brassica napus HOM05D002211 ORTHO05D002206 6.9e-08 61.2 35 68.6
C02p09800 Brassica napus HOM05D002211 ORTHO05D002206 6.9e-08 61.2 157 33.1
Phvul.010G031300 Phaseolus vulgaris HOM05D002211 ORTHO05D002206 6.9e-08 61.2 142 31.0
Glyma.08G344400 Glycine max HOM05D002211 ORTHO05D002206 9.0e-08 60.8 153 30.7
Potri.002G250800 Populus trichocarpa HOM05D002211 ORTHO05D002206 9.0e-08 60.8 142 33.8
TAR365G1226 Trochodendron aralioides HOM05D002211 ORTHO05D002206 9.0e-08 60.8 152 33.6
VMungo0331G1849 Vigna mungo HOM05D002211 ORTHO05D002206 9.0e-08 60.8 147 31.3
Gohir.A11G142300 Gossypium hirsutum HOM05D002211 ORTHO05D002206 1.2e-07 60.5 141 31.2
Gohir.D11G148600 Gossypium hirsutum HOM05D002211 ORTHO05D002206 1.2e-07 60.5 141 31.2
Gohir.D07G203200 Gossypium hirsutum HOM05D002211 ORTHO05D002206 1.5e-07 60.1 141 29.1
Gorai.007G159300 Gossypium raimondii HOM05D002211 ORTHO05D002206 1.5e-07 60.1 141 31.2
Gohir.A07G196800 Gossypium hirsutum HOM05D002211 ORTHO05D002206 2.0e-07 59.7 141 29.1
CANSAT01G1044 Cannabis sativa HOM05D002211 ORTHO05D002206 3.4e-07 58.9 150 31.3
Gorai.001G228600 Gossypium raimondii HOM05D002211 ORTHO05D002206 3.4e-07 58.9 141 29.1
VMungo1383G1511 Vigna mungo HOM05D002211 ORTHO05D002206 4.5e-07 58.5 144 30.6
ATR0686G227 Amborella trichopoda HOM05D002211 ORTHO05D002206 5.8e-07 58.2 44 54.5
Glyma.18G152300 Glycine max HOM05D002211 ORTHO05D002206 7.6e-07 57.8 160 34.4
Aa31LG11G11290 Aethionema arabicum HOM05D002211 ORTHO05D002206 1.0e-06 57.4 36 72.2
Carub.0006s1659 Capsella rubella HOM05D002211 ORTHO05D002206 1.0e-06 57.4 38 63.2
CDE05G0436 Ceratophyllum demersum HOM05D002211 ORTHO05D002206 1.0e-06 57.4 142 29.6
Psat4g206640 Pisum sativum HOM05D002211 ORTHO05D002206 1.0e-06 57.4 136 30.9
Hund09466 Selenicereus undatus HOM05D002211 ORTHO05D002206 1.0e-06 57.4 145 30.3
Actinidia30019 Actinidia chinensis HOM05D002211 ORTHO05D002206 1.3e-06 57.0 150 28.7
Manes.13G054300 Manihot esculenta HOM05D002211 ORTHO05D002206 1.3e-06 57.0 144 29.9
Nn5g27522 Nelumbo nucifera HOM05D002211 ORTHO05D002206 1.3e-06 57.0 164 29.3
Dinv28814 Davidia involucrata HOM05D002211 ORTHO05D002206 1.7e-06 56.6 158 31.6
CDE05G1888 Ceratophyllum demersum HOM05D002211 ORTHO05D002206 2.2e-06 56.2 142 27.5
DCAR_005529 Daucus carota HOM05D002211 ORTHO05D002206 2.2e-06 56.2 31 74.2
DCAR_018626 Daucus carota HOM05D002211 ORTHO05D002206 2.2e-06 56.2 156 28.8
Migut.N00663 Erythranthe guttata HOM05D002211 ORTHO05D002206 2.2e-06 56.2 143 30.1
Sopen06g034470 Solanum pennellii HOM05D002211 ORTHO05D002206 2.2e-06 56.2 144 32.6
CARHR194750 Cardamine hirsuta HOM05D002211 ORTHO05D002206 2.9e-06 55.8 38 60.5
Dinv10434 Davidia involucrata HOM05D002211 ORTHO05D002206 2.9e-06 55.8 151 30.5
Gohir.A07G159400 Gossypium hirsutum HOM05D002211 ORTHO05D002206 2.9e-06 55.8 137 29.9
Phvul.008G137200 Phaseolus vulgaris HOM05D002211 ORTHO05D002206 2.9e-06 55.8 159 32.1
Solyc06g083080.3 Solanum lycopersicum HOM05D002211 ORTHO05D002206 2.9e-06 55.8 141 32.6
CSS0000478 Camellia sinensis var. sinensis HOM05D002211 ORTHO05D002206 3.8e-06 55.5 156 28.8
Cpa.g.sc8.75 Carica papaya HOM05D002211 ORTHO05D002206 3.8e-06 55.5 142 33.1
FAN27G0804 Fragaria x ananassa HOM05D002211 ORTHO05D002206 3.8e-06 55.5 118 32.2
CiPaw.14G043400 Carya illinoinensis HOM05D002211 ORTHO05D002206 4.9e-06 55.1 137 29.9
Gohir.D07G167000 Gossypium hirsutum HOM05D002211 ORTHO05D002206 6.5e-06 54.7 132 30.3
Gorai.N003500 Gossypium raimondii HOM05D002211 ORTHO05D002206 6.5e-06 54.7 134 29.9
Lsat_1_v5_gn_9_16221 Lactuca sativa HOM05D002211 ORTHO05D002206 6.5e-06 54.7 68 42.6
TAR633G0017 Trochodendron aralioides HOM05D002211 ORTHO05D002206 6.5e-06 54.7 38 63.2
SGA_v2.0_scaffold566G52949 Striga asiatica HOM05D002211 ORTHO05D002206 8.4e-06 54.3 142 29.6


User provided reference genes

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