Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000500g0270 Nicotiana tabacum HOM05D004021 ORTHO05D003767 0.0e+00 2156.3 1147 100.0
Nitab4.5_0000406g0040 Nicotiana tabacum HOM05D004021 ORTHO05D003767 0.0e+00 1629.8 1130 83.1
Nitab4.5_0002178g0010 Nicotiana tabacum HOM05D004021 ORTHO05D003767 0.0e+00 1622.1 1169 79.9
Peaxi162Scf00657g00058 Petunia axillaris HOM05D004021 ORTHO05D003767 1.1e-276 957.2 1272 51.3
Nitab4.5_0000664g0210 Nicotiana tabacum HOM05D004021 ORTHO05D003767 3.0e-176 623.6 1245 39.4
Nitab4.5_0000664g0250 Nicotiana tabacum HOM05D004021 ORTHO05D003767 1.1e-175 621.7 1243 39.8
Nitab4.5_0001567g0150 Nicotiana tabacum HOM05D004021 ORTHO05D003767 1.5e-172 611.3 1240 38.9
Nitab4.5_0001567g0120 Nicotiana tabacum HOM05D004021 ORTHO05D003767 4.1e-170 603.2 1240 39.1
Peaxi162Scf00276g00210 Petunia axillaris HOM05D004021 ORTHO05D003767 4.1e-170 603.2 1245 38.4
CAN.G309.87 Capsicum annuum HOM05D004021 ORTHO05D003767 6.4e-163 579.3 1243 38.7
PGSC0003DMG401018585 Solanum tuberosum HOM05D004021 ORTHO05D003767 2.5e-151 540.8 1253 37.1
Solyc11g071250.3 Solanum lycopersicum HOM05D004021 ORTHO05D003767 7.4e-143 512.7 1247 36.2
Sopen11g028940 Solanum pennellii HOM05D004021 ORTHO05D003767 2.8e-142 510.8 1247 36.1
Dinv14242 Davidia involucrata HOM05D004021 ORTHO05D003767 3.2e-37 161.8 1326 24.6
Oeu031555.1 Olea europaea HOM05D004021 ORTHO05D003767 4.2e-37 161.4 1205 24.8
Dinv30267 Davidia involucrata HOM05D004021 ORTHO05D003767 9.3e-37 160.2 1333 23.9
Oeu012193.1 Olea europaea HOM05D004021 ORTHO05D003767 1.5e-34 152.9 1201 24.2
PGSC0003DMG400005497 Solanum tuberosum HOM05D026527 ORTHO05D037674 3.0e-27 128.6 735 27.6
CSS0009602 Camellia sinensis var. sinensis HOM05D004021 ORTHO05D003767 3.3e-26 125.2 546 30.8
Actinidia14666 Actinidia chinensis HOM05D004021 ORTHO05D003767 5.3e-24 117.9 614 29.0
Lj8A589G31 Lonicera japonica HOM05D004021 ORTHO05D003767 1.5e-23 116.3 705 26.8
Sopen08g022290 Solanum pennellii HOM05D026527 ORTHO05D037674 2.9e-22 112.1 418 29.4
Manes.16G071666 Manihot esculenta HOM05D004021 ORTHO05D003767 3.8e-22 111.7 557 28.2
Solyc08g068410.3 Solanum lycopersicum HOM05D026527 ORTHO05D037674 4.9e-22 111.3 280 34.6
Actinidia15734 Actinidia chinensis HOM05D004021 ORTHO05D003767 1.3e-19 103.2 1202 22.0
CiPaw.07G205800 Carya illinoinensis HOM05D004021 ORTHO05D003767 3.9e-19 101.7 988 23.4
SalBow1G4226 Salvia bowleyana HOM05D004021 ORTHO05D003767 6.7e-19 100.9 1245 22.2
QL12p029472 Quercus lobata HOM05D004021 ORTHO05D003767 1.6e-17 96.3 676 25.0
Lj8A589T33 Lonicera japonica HOM05D004021 ORTHO05D003767 4.8e-17 94.7 112 47.3
Potri.018G039500 Populus trichocarpa HOM05D004021 ORTHO05D003767 1.4e-16 93.2 509 26.7
MSTRG.1655 Avicennia marina HOM05D004021 ORTHO05D003767 2.4e-16 92.4 1200 21.8
Potri.006G240500 Populus trichocarpa HOM05D004021 ORTHO05D003767 5.3e-16 91.3 542 27.3
Sabra06G0188100 Salix brachista HOM05D004021 ORTHO05D003767 6.9e-16 90.9 556 25.9
Rhsim07G0152700 Rhododendron simsii HOM05D004021 ORTHO05D003767 1.5e-15 89.7 559 26.7
Haze_21872 Corylus avellana HOM05D004021 ORTHO05D003767 7.6e-15 87.4 679 24.9
Cpa.g.sc7.254 Carica papaya HOM05D004021 ORTHO05D003767 6.5e-14 84.3 115 41.7
Migut.A00223 Erythranthe guttata HOM05D004021 ORTHO05D003767 6.5e-14 84.3 215 33.5
CANSAT25G3821 Cannabis sativa HOM05D004021 ORTHO05D003767 8.4e-14 84.0 667 25.0
Ciclev10007267m.g Citrus clementina HOM05D004021 ORTHO05D003767 1.9e-13 82.8 837 24.0
Sabra18G0039500 Salix brachista HOM05D004021 ORTHO05D003767 1.9e-13 82.8 546 26.6
DCAR_003118 Daucus carota HOM05D004021 ORTHO05D003767 7.1e-13 80.9 105 41.9
SGA_v2.0_scaffold169G38653 Striga asiatica HOM05D004021 ORTHO05D003767 1.2e-12 80.1 99 43.4
DCAR_007709 Daucus carota HOM05D004021 ORTHO05D003767 1.6e-12 79.7 139 33.1
unitig_578.g16592 Utricularia gibba HOM05D004021 ORTHO05D003767 2.1e-12 79.3 103 44.7
GSVIVG01035651001 Vitis vinifera HOM05D004021 ORTHO05D003767 2.7e-12 79.0 506 24.7
MSTRG.14021 Avicennia marina HOM05D004021 ORTHO05D003767 6.1e-12 77.8 1186 21.6
Eucgr.C02901 Eucalyptus grandis HOM05D004021 ORTHO05D003767 6.1e-12 77.8 74 50.0
Lalb_Chr01g0011141 Lupinus albus HOM05D004021 ORTHO05D003767 6.1e-12 77.8 82 47.6
unitig_26.g9789 Utricularia gibba HOM05D004021 ORTHO05D003767 6.1e-12 77.8 124 36.3
RcHm_v2.0_Chr6g0305941 Rosa chinensis HOM05D004021 ORTHO05D003767 1.0e-11 77.0 666 23.3
Lj1g0012897 Lotus japonicus HOM05D004021 ORTHO05D003767 1.8e-11 76.3 94 46.8
TAR626G0813 Trochodendron aralioides HOM05D004021 ORTHO05D003767 1.8e-11 76.3 117 43.6
SGA_v2.0_scaffold163G38081 Striga asiatica HOM05D004021 ORTHO05D003767 3.0e-11 75.5 84 42.9
Glyma.17G195000 Glycine max HOM05D004021 ORTHO05D003767 5.1e-11 74.7 53 62.3
Lalb_Chr11g0064441 Lupinus albus HOM05D004021 ORTHO05D003767 5.1e-11 74.7 82 47.6
Nn2g11674 Nelumbo nucifera HOM05D004021 ORTHO05D003767 8.7e-11 73.9 98 42.9
Thecc.09G042000 Theobroma cacao HOM05D004021 ORTHO05D003767 8.7e-11 73.9 713 25.8
Cfa013353 Carpinus fangiana HOM05D004021 ORTHO05D003767 1.1e-10 73.6 674 25.2
vmacro18883 Vaccinium macrocarpon HOM05D004021 ORTHO05D003767 1.1e-10 73.6 78 44.9
Lj4g0004076 Lotus japonicus HOM05D032889 ORTHO05D003767 1.5e-10 73.2 144 35.4
Atru.chr7.2140 Acer truncatum HOM05D004021 ORTHO05D003767 2.5e-10 72.4 488 26.8
TPR.G1392 Trifolium pratense HOM05D004021 ORTHO05D003767 2.5e-10 72.4 87 47.1
Hund19530 Selenicereus undatus HOM05D012164 ORTHO05D003767 4.3e-10 71.6 63 46.0
PGR044G0442 Punica granatum HOM05D004021 ORTHO05D003767 5.7e-10 71.2 106 38.7
BraA03t09842Z Brassica rapa HOM05D004021 ORTHO05D003767 7.4e-10 70.9 217 31.3
arahy.Tifrunner.gnm1.ann1.E545QA Arachis hypogaea HOM05D004021 ORTHO05D003767 1.3e-09 70.1 81 45.7
AUR62009309 Chenopodium quinoa HOM05D012164 ORTHO05D003767 1.3e-09 70.1 96 38.5
SalBow4G0344 Salvia bowleyana HOM05D004021 ORTHO05D003767 1.3e-09 70.1 80 45.0
BolC3t13094H Brassica oleracea HOM05D004021 ORTHO05D003767 1.6e-09 69.7 214 30.4
CiPaw.08G024400 Carya illinoinensis HOM05D004021 ORTHO05D003767 2.2e-09 69.3 534 24.3
COL.COLO4_18677 Corchorus olitorius HOM05D004021 ORTHO05D003767 2.2e-09 69.3 654 24.9
BcaB01g05477 Brassica carinata HOM05D004021 ORTHO05D003767 2.8e-09 68.9 216 30.1
MBI01_g30860_MAGBIO Magnolia biondii HOM05D004021 ORTHO05D003767 3.7e-09 68.6 89 41.6
C03p05810 Brassica napus HOM05D000602 ORTHO05D006896 4.8e-09 68.2 214 29.9
Lalb_Chr08g0243171 Lupinus albus HOM05D004021 ORTHO05D003767 6.3e-09 67.8 72 44.4
Psat5g022920 Pisum sativum HOM05D004021 ORTHO05D003767 6.3e-09 67.8 87 43.7
unitig_85.g27153 Utricularia gibba HOM05D004021 ORTHO05D003767 6.3e-09 67.8 120 36.7
BcaC03g13370 Brassica carinata HOM05D004021 ORTHO05D003767 8.2e-09 67.4 87 43.7
C02p05090 Brassica napus HOM05D004021 ORTHO05D003767 8.2e-09 67.4 87 43.7
BolC2t06463H Brassica oleracea HOM05D004021 ORTHO05D003767 8.2e-09 67.4 87 43.7
Gorai.001G027600 Gossypium raimondii HOM05D004021 ORTHO05D003767 8.2e-09 67.4 525 26.1
TAR383G0364 Trochodendron aralioides HOM05D004021 ORTHO05D003767 8.2e-09 67.4 67 47.8
Ah.10g035100 Amaranthus hybridus HOM05D012164 ORTHO05D003767 1.1e-08 67.0 76 40.8
FAN15G2992 Fragaria x ananassa HOM05D004021 ORTHO05D003767 1.1e-08 67.0 681 23.8
Lalb_Chr24g0396931 Lupinus albus HOM05D004021 ORTHO05D003767 1.4e-08 66.6 84 42.9
Medtr3g110082 Medicago truncatula HOM05D004021 ORTHO05D003767 1.4e-08 66.6 87 43.7
Medtr3g110132 Medicago truncatula HOM05D004021 ORTHO05D003767 1.4e-08 66.6 87 43.7
Aa31LG3G15670 Aethionema arabicum HOM05D004021 ORTHO05D003767 1.8e-08 66.2 97 40.2
A03p05080 Brassica napus HOM05D000602 ORTHO05D006896 1.8e-08 66.2 214 29.0
Duzib187G0651 Durio zibethinus HOM05D004021 ORTHO05D003767 1.8e-08 66.2 649 24.3
Oeu015740.1 Olea europaea HOM05D004021 ORTHO05D003767 1.8e-08 66.2 424 23.3
Lalb_Chr22g0352261 Lupinus albus HOM05D004021 ORTHO05D003767 2.4e-08 65.9 80 43.8
Ah.16g105370 Amaranthus hybridus HOM05D012164 ORTHO05D003767 4.1e-08 65.1 106 34.0
A02p01040 Brassica napus HOM05D004021 ORTHO05D003767 5.3e-08 64.7 122 34.4
BraA02t05084Z Brassica rapa HOM05D004021 ORTHO05D003767 5.3e-08 64.7 122 34.4
Glyma.04G081800 Glycine max HOM05D004021 ORTHO05D003767 5.3e-08 64.7 69 47.8
Glyma.06G083500 Glycine max HOM05D004021 ORTHO05D003767 5.3e-08 64.7 111 36.9
Gohir.A07G023100 Gossypium hirsutum HOM05D004021 ORTHO05D003767 5.3e-08 64.7 606 25.1
Psat5g022840 Pisum sativum HOM05D004021 ORTHO05D003767 5.3e-08 64.7 71 45.1
Sp6g32070 Schrenkiella parvula HOM05D004021 ORTHO05D003767 5.3e-08 64.7 87 41.4
BcaNung01931 Brassica carinata HOM05D004021 ORTHO05D003767 6.9e-08 64.3 77 44.2
FAN20G2231 Fragaria x ananassa HOM05D004021 ORTHO05D003767 6.9e-08 64.3 676 22.9
AL6G22200 Arabidopsis lyrata HOM05D004021 ORTHO05D003767 9.0e-08 63.9 77 41.6
Thhalv10015703m.g Eutrema salsugineum HOM05D004021 ORTHO05D003767 9.0e-08 63.9 88 39.8
THA.LOC104799199 Tarenaya hassleriana HOM05D004021 ORTHO05D003767 9.0e-08 63.9 78 44.9
Gorai.001G027700 Gossypium raimondii HOM05D004021 ORTHO05D003767 1.2e-07 63.5 609 25.5
Prupe.1G450900 Prunus persica HOM05D004021 ORTHO05D003767 1.2e-07 63.5 855 22.5
CDE05G1483 Ceratophyllum demersum HOM05D050580 ORTHO05D003767 1.5e-07 63.2 149 32.2
Gohir.D07G026700 Gossypium hirsutum HOM05D004021 ORTHO05D003767 1.5e-07 63.2 609 25.3
PSO782G1327 Papaver somniferum HOM05D004021 ORTHO05D003767 1.5e-07 63.2 62 43.5
VMungo1309G0329 Vigna mungo HOM05D004021 ORTHO05D003767 2.0e-07 62.8 228 28.5
vmacro05366 Vaccinium macrocarpon HOM05D004021 ORTHO05D003767 2.6e-07 62.4 1221 22.1
VMungo0647G2380 Vigna mungo HOM05D058389 ORTHO05D003767 2.6e-07 62.4 52 55.8
Lsat_1_v5_gn_6_64101 Lactuca sativa HOM05D004021 ORTHO05D003767 3.4e-07 62.0 98 32.7
Lalb_Chr14g0372341 Lupinus albus HOM05D004021 ORTHO05D003767 7.7e-07 60.8 79 39.2
SEGI_07029 Sequoiadendron giganteum HOM05D004021 ORTHO05D003767 1.0e-06 60.5 71 36.6
Lsat_1_v5_gn_4_94561 Lactuca sativa HOM05D004021 ORTHO05D003767 1.3e-06 60.1 93 34.4
CDE05G1167 Ceratophyllum demersum HOM05D004021 ORTHO05D003767 1.7e-06 59.7 59 45.8
Gohir.A07G023000 Gossypium hirsutum HOM05D004021 ORTHO05D003767 1.7e-06 59.7 630 24.0
Aa31LG11G4580 Aethionema arabicum HOM05D004021 ORTHO05D003767 2.2e-06 59.3 57 47.4
ECA233G1986 Erigeron canadensis HOM05D004021 ORTHO05D003767 2.2e-06 59.3 91 39.6
Phvul.009G107600 Phaseolus vulgaris HOM05D004021 ORTHO05D003767 2.9e-06 58.9 206 29.1
ATR0315G010 Amborella trichopoda HOM05D004021 ORTHO05D003767 3.8e-06 58.5 57 47.4
FAN27G1714 Fragaria x ananassa HOM05D004021 ORTHO05D003767 3.8e-06 58.5 649 23.4
Carub.0006s1000 Capsella rubella HOM05D004021 ORTHO05D003767 5.0e-06 58.2 192 25.5
Lalb_Chr11g0064431 Lupinus albus HOM05D004021 ORTHO05D003767 5.0e-06 58.2 147 32.0
HPP92_026866 Vanilla planifolia HOM05D004021 ORTHO05D003767 5.0e-06 58.2 61 42.6
TWI63G0612 Tripterygium wilfordii HOM05D004021 ORTHO05D003767 6.5e-06 57.8 396 24.7


User provided reference genes

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