Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000500g0150 Nicotiana tabacum HOM05D006148 ORTHO05D007955 1.9e-48 195.7 110 100.0
Nitab4.5_0007628g0010 Nicotiana tabacum HOM05D006148 ORTHO05D007955 1.1e-30 136.7 142 65.5
PGSC0003DMG400026249 Solanum tuberosum HOM05D006148 ORTHO05D007955 1.7e-25 119.4 142 57.7
Solyc08g077970.2 Solanum lycopersicum HOM05D006148 ORTHO05D007955 3.3e-24 115.2 142 56.3
Sopen08g026480 Solanum pennellii HOM05D006148 ORTHO05D007955 1.6e-23 112.8 142 55.6
CAN.G761.17 Capsicum annuum HOM05D006148 ORTHO05D007955 2.8e-23 112.1 142 54.2
Cc02_g08620 Coffea canephora HOM05D006148 ORTHO05D007955 4.7e-15 84.7 145 46.2
DCAR_005581 Daucus carota HOM05D006148 ORTHO05D007955 1.4e-14 83.2 112 46.4
Hma1.2p1_0840F.1_g226570 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 1.4e-14 83.2 110 47.3
unitig_46.g17987 Utricularia gibba HOM05D006148 ORTHO05D007955 1.4e-14 83.2 140 43.6
Eucgr.D02128 Eucalyptus grandis HOM05D006148 ORTHO05D007955 1.8e-14 82.8 110 46.4
Solyc06g060920.3 Solanum lycopersicum HOM05D006148 ORTHO05D007955 1.8e-14 82.8 140 42.9
MSTRG.9371 Avicennia marina HOM05D006148 ORTHO05D007955 2.4e-14 82.4 110 46.4
Peaxi162Scf00190g00088 Petunia axillaris HOM05D006148 ORTHO05D007955 3.1e-14 82.0 108 47.2
CSS0033428 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 4.0e-14 81.6 142 44.4
Migut.I00620 Erythranthe guttata HOM05D006148 ORTHO05D007955 4.0e-14 81.6 110 45.5
Atru.chr9.1220 Acer truncatum HOM05D006148 ORTHO05D007955 5.2e-14 81.3 99 50.5
Nitab4.5_0003456g0030 Nicotiana tabacum HOM05D006148 ORTHO05D007955 5.2e-14 81.3 140 43.6
Oeu040676.1 Olea europaea HOM05D006148 ORTHO05D007955 5.2e-14 81.3 112 45.5
PGSC0003DMG400026577 Solanum tuberosum HOM05D006148 ORTHO05D007955 5.2e-14 81.3 140 42.9
Sopen06g021070 Solanum pennellii HOM05D006148 ORTHO05D007955 9.0e-14 80.5 140 42.1
Ca_20510_v3 Cicer arietinum L. HOM05D006148 ORTHO05D007955 1.2e-13 80.1 100 47.0
Nitab4.5_0000506g0080 Nicotiana tabacum HOM05D006148 ORTHO05D007955 1.2e-13 80.1 140 42.9
MD04G1051900 Malus domestica HOM05D006148 ORTHO05D007955 2.0e-13 79.3 108 47.2
CSS0030063 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 2.6e-13 79.0 115 43.5
Ciclev10022620m.g Citrus clementina HOM05D006148 ORTHO05D007955 2.6e-13 79.0 101 50.5
Dinv21692 Davidia involucrata HOM05D006148 ORTHO05D007955 2.6e-13 79.0 137 42.3
Oeu017209.1 Olea europaea HOM05D006148 ORTHO05D007955 2.6e-13 79.0 142 43.0
unitig_747.g21320 Utricularia gibba HOM05D006148 ORTHO05D007955 4.4e-13 78.2 140 40.7
SGA_v2.0_scaffold40G15681 Striga asiatica HOM05D006148 ORTHO05D007955 5.8e-13 77.8 142 41.5
vmacro14126 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 5.8e-13 77.8 97 50.5
arahy.Tifrunner.gnm1.ann1.0GR2GF Arachis hypogaea HOM05D006148 ORTHO05D007955 7.6e-13 77.4 91 50.5
arahy.Tifrunner.gnm1.ann1.L2DS42 Arachis hypogaea HOM05D006148 ORTHO05D007955 7.6e-13 77.4 91 50.5
Gohir.A12G213600 Gossypium hirsutum HOM05D006148 ORTHO05D007955 7.6e-13 77.4 99 47.5
Gohir.D12G216200 Gossypium hirsutum HOM05D006148 ORTHO05D007955 7.6e-13 77.4 110 44.5
Gorai.008G231600 Gossypium raimondii HOM05D006148 ORTHO05D007955 7.6e-13 77.4 110 44.5
PGR031G0321 Punica granatum HOM05D006148 ORTHO05D007955 7.6e-13 77.4 134 44.0
Actinidia10861 Actinidia chinensis HOM05D006148 ORTHO05D007955 9.9e-13 77.0 100 50.0
Aqoxy7G03487 Aquilegia oxysepala HOM05D006148 ORTHO05D007955 9.9e-13 77.0 100 51.0
Lj3A721T48 Lonicera japonica HOM05D006148 ORTHO05D007955 9.9e-13 77.0 110 42.7
Rhsim07G0118900 Rhododendron simsii HOM05D006148 ORTHO05D007955 9.9e-13 77.0 101 47.5
CANSAT21G1845 Cannabis sativa HOM05D006148 ORTHO05D007955 1.7e-12 76.3 108 46.3
Glyma.16G092500 Glycine max HOM05D006148 ORTHO05D007955 1.7e-12 76.3 110 42.7
MD06G1048200 Malus domestica HOM05D006148 ORTHO05D007955 1.7e-12 76.3 115 45.2
SGA_v2.0_scaffold377G50308 Striga asiatica HOM05D006148 ORTHO05D007955 1.7e-12 76.3 142 41.5
TPR.G30538 Trifolium pratense HOM05D006148 ORTHO05D007955 2.2e-12 75.9 100 45.0
ClCG09G012770 Citrullus lanatus HOM05D006148 ORTHO05D007955 2.9e-12 75.5 110 48.2
Manes.02G044300 Manihot esculenta HOM05D006148 ORTHO05D007955 2.9e-12 75.5 110 45.5
CsaV3_3G049830 Cucumis sativus L. HOM05D006148 ORTHO05D007955 3.8e-12 75.1 101 48.5
MBI15_g47175_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 3.8e-12 75.1 97 48.5
Thecc.03G242700 Theobroma cacao HOM05D006148 ORTHO05D007955 3.8e-12 75.1 92 50.0
Psat5g091640 Pisum sativum HOM05D006148 ORTHO05D007955 1.4e-11 73.2 117 41.0
Prupe.5G058400 Prunus persica HOM05D006148 ORTHO05D007955 1.4e-11 73.2 116 45.7
PSO541G2943 Papaver somniferum HOM05D006148 ORTHO05D007955 1.9e-11 72.8 78 56.4
Sed0014825 Sechium edule HOM05D006148 ORTHO05D007955 2.4e-11 72.4 108 46.3
Duzib068G0643 Durio zibethinus HOM05D006148 ORTHO05D007955 3.2e-11 72.0 97 43.3
COL.COLO4_07508 Corchorus olitorius HOM05D006148 ORTHO05D007955 4.2e-11 71.6 98 48.0
TWI15G0129 Tripterygium wilfordii HOM05D006148 ORTHO05D007955 4.2e-11 71.6 107 44.9
Lalb_Chr18g0047251 Lupinus albus HOM05D006148 ORTHO05D007955 5.4e-11 71.2 100 46.0
Lalb_Chr15g0078661 Lupinus albus HOM05D006148 ORTHO05D007955 9.3e-11 70.5 109 44.0
RcHm_v2.0_Chr7g0205301 Rosa chinensis HOM05D006148 ORTHO05D007955 9.3e-11 70.5 114 41.2
TAR375G0576 Trochodendron aralioides HOM05D006148 ORTHO05D007955 9.3e-11 70.5 109 44.0
Rhsim07G0118700 Rhododendron simsii HOM05D006148 ORTHO05D007955 1.6e-10 69.7 119 40.3
SalBow1G4160 Salvia bowleyana HOM05D006148 ORTHO05D007955 1.6e-10 69.7 80 53.8
Medtr3g086600 Medicago truncatula HOM05D006148 ORTHO05D007955 2.1e-10 69.3 112 40.2
MELO3C003333.2 Cucumis melo HOM05D006148 ORTHO05D007955 2.7e-10 68.9 83 50.6
MBI06_g25325_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 3.5e-10 68.6 85 49.4
Phvul.010G018500 Phaseolus vulgaris HOM05D006148 ORTHO05D007955 3.5e-10 68.6 110 39.1
VMungo0331G0425 Vigna mungo HOM05D006148 ORTHO05D007955 3.5e-10 68.6 90 46.7
FvH4_5g20230 Fragaria vesca HOM05D006148 ORTHO05D007955 4.6e-10 68.2 102 43.1
Lsat_1_v5_gn_3_16181 Lactuca sativa HOM05D006148 ORTHO05D007955 4.6e-10 68.2 108 43.5
CiPaw.12G047200 Carya illinoinensis HOM05D006148 ORTHO05D007955 6.0e-10 67.8 106 43.4
DCAR_008334 Daucus carota HOM05D006148 ORTHO05D007955 6.0e-10 67.8 139 36.7
Lj3g0001636 Lotus japonicus HOM05D006148 ORTHO05D007955 6.0e-10 67.8 90 44.4
Potri.012G038600 Populus trichocarpa HOM05D006148 ORTHO05D007955 6.0e-10 67.8 100 45.0
HanXRQChr17g0550021 Helianthus annuus HOM05D006148 ORTHO05D007955 7.8e-10 67.4 133 41.4
FAN04G0567 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.3e-09 66.6 114 39.5
FAN08G3523 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.3e-09 66.6 102 42.2
FAN13G2154 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.3e-09 66.6 102 42.2
FAN13G3051 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.3e-09 66.6 102 42.2
Glyma.09G078400 Glycine max HOM05D006148 ORTHO05D007955 1.3e-09 66.6 83 45.8
Sed0021147 Sechium edule HOM05D006148 ORTHO05D007955 1.7e-09 66.2 108 42.6
ECA248G1075 Erigeron canadensis HOM05D006148 ORTHO05D007955 2.3e-09 65.9 105 41.0
PSO675G9254 Papaver somniferum HOM05D006148 ORTHO05D007955 3.0e-09 65.5 78 55.1
Lj2A721G5 Lonicera japonica HOM05D006148 ORTHO05D007955 1.9e-08 62.8 67 55.2
Sabra12G0027000 Salix brachista HOM05D006148 ORTHO05D007955 1.9e-08 62.8 111 39.6
Lj2A228G47 Lonicera japonica HOM05D006148 ORTHO05D007955 2.5e-08 62.4 109 42.2
Ah.07g196390 Amaranthus hybridus HOM05D006148 ORTHO05D007955 3.3e-08 62.0 95 47.4
Sc22g0005540 Simmondsia chinensis HOM05D006148 ORTHO05D007955 5.6e-08 61.2 125 43.2
Hund11457 Selenicereus undatus HOM05D006148 ORTHO05D007955 7.3e-08 60.8 125 41.6
ATR0767G234 Amborella trichopoda HOM05D006148 ORTHO05D007955 1.3e-07 60.1 90 43.3
Carub.0007s2441 Capsella rubella HOM05D006148 ORTHO05D007955 2.1e-07 59.3 97 36.1
Haze_05448 Corylus avellana HOM05D006148 ORTHO05D007955 8.1e-07 57.4 146 33.6
EL10Ac5g12797 Beta vulgaris HOM05D006148 ORTHO05D007955 1.1e-06 57.0 83 47.0
HPP92_005702 Vanilla planifolia HOM05D006148 ORTHO05D007955 1.1e-06 57.0 94 38.3
CDE04G1348 Ceratophyllum demersum HOM05D006148 ORTHO05D007955 1.4e-06 56.6 126 34.9
THA.LOC104814463 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 1.4e-06 56.6 95 35.8
Hma1.2p1_1008F.1_g247180 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 2.4e-06 55.8 75 46.7
Aa31LG2G13090 Aethionema arabicum HOM05D006148 ORTHO05D007955 3.1e-06 55.5 97 35.1
CARHR223570 Cardamine hirsuta HOM05D006148 ORTHO05D007955 6.9e-06 54.3 105 34.3
Nn1g00796 Nelumbo nucifera HOM05D006148 ORTHO05D007955 9.0e-06 53.9 77 44.2


User provided reference genes

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