Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000498g0080 Nicotiana tabacum HOM05D003173 ORTHO05D003546 7.6e-138 493.8 247 100.0
Nitab4.5_0002353g0090 Nicotiana tabacum HOM05D003173 ORTHO05D003546 1.3e-129 466.5 247 94.7
Sopen12g031280 Solanum pennellii HOM05D003173 ORTHO05D003546 1.5e-77 293.5 251 65.3
PGSC0003DMG400029419 Solanum tuberosum HOM05D003173 ORTHO05D003546 1.5e-77 293.5 250 65.6
CAN.G401.21 Capsicum annuum HOM05D003173 ORTHO05D003546 1.7e-76 290.0 257 64.6
Solyc12g094390.1 Solanum lycopersicum HOM05D003173 ORTHO05D003546 1.8e-75 286.6 249 64.3
Peaxi162Scf00064g00081 Petunia axillaris HOM05D003173 ORTHO05D003546 1.9e-67 260.0 256 60.9
Peaxi162Scf00174g00083 Petunia axillaris HOM05D003173 ORTHO05D003546 3.7e-52 209.1 252 52.4
Peaxi162Scf00744g00026 Petunia axillaris HOM05D003173 ORTHO05D003546 1.4e-51 207.2 252 52.0
Solyc04g081960.1 Solanum lycopersicum HOM05D003173 ORTHO05D003546 1.5e-48 197.2 252 52.0
PGSC0003DMG400009955 Solanum tuberosum HOM05D003173 ORTHO05D003546 8.1e-47 191.4 262 48.5
Sopen04g035610 Solanum pennellii HOM05D003173 ORTHO05D003546 8.9e-46 188.0 260 48.8
Thecc.08G051800 Theobroma cacao HOM05D003173 ORTHO05D003546 2.1e-42 176.8 258 45.3
TAR376G0945 Trochodendron aralioides HOM05D003173 ORTHO05D003546 7.8e-42 174.9 255 43.9
Manes.18G009300 Manihot esculenta HOM05D003173 ORTHO05D003546 1.0e-41 174.5 264 45.1
Duzib116G0616 Durio zibethinus HOM05D003173 ORTHO05D003546 2.3e-41 173.3 262 46.2
Actinidia15462 Actinidia chinensis HOM05D003173 ORTHO05D003546 5.1e-41 172.2 250 46.8
Duzib093G0730 Durio zibethinus HOM05D003173 ORTHO05D003546 8.7e-41 171.4 262 46.2
TAR628G1607 Trochodendron aralioides HOM05D003173 ORTHO05D003546 7.3e-40 168.3 253 44.3
CSS0006148 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 2.1e-39 166.8 261 46.7
COL.COLO4_26083 Corchorus olitorius HOM05D003173 ORTHO05D003546 2.1e-39 166.8 257 44.0
CiPaw.07G143600 Carya illinoinensis HOM05D003173 ORTHO05D003546 3.6e-39 166.0 269 45.4
Dinv31893 Davidia involucrata HOM05D003173 ORTHO05D003546 6.2e-39 165.2 252 46.8
Cc10_g01130 Coffea canephora HOM05D003173 ORTHO05D003546 3.1e-38 162.9 274 43.4
Gorai.009G191200 Gossypium raimondii HOM05D003173 ORTHO05D003546 5.8e-37 158.7 266 44.0
MSTRG.24229 Avicennia marina HOM05D003173 ORTHO05D003546 2.9e-36 156.4 253 40.7
Nitab4.5_0003030g0080 Nicotiana tabacum HOM05D003173 ORTHO05D003546 8.4e-36 154.8 211 51.2
Haze_22703 Corylus avellana HOM05D003173 ORTHO05D003546 1.1e-35 154.5 272 44.5
Gohir.A05G182800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 1.1e-35 154.5 266 43.2
Glyma.14G222400 Glycine max HOM05D003173 ORTHO05D003546 1.4e-35 154.1 253 45.1
Nn6g31907 Nelumbo nucifera HOM05D003173 ORTHO05D003546 3.2e-35 152.9 259 42.9
QL02p012938 Quercus lobata HOM05D003173 ORTHO05D003546 7.1e-35 151.8 277 40.8
Aqoxy6G01958 Aquilegia oxysepala HOM05D003173 ORTHO05D003546 1.6e-34 150.6 257 43.2
Rhsim06G0012200 Rhododendron simsii HOM05D003173 ORTHO05D003546 3.5e-34 149.4 263 42.6
CANSAT25G2829 Cannabis sativa HOM05D003173 ORTHO05D003546 4.6e-34 149.1 278 37.4
Oeu026120.1 Olea europaea HOM05D003173 ORTHO05D003546 6.0e-34 148.7 256 42.6
Potri.002G016500 Populus trichocarpa HOM05D003173 ORTHO05D003546 6.0e-34 148.7 262 40.1
vmacro04379 Vaccinium macrocarpon HOM05D003173 ORTHO05D003546 6.0e-34 148.7 260 41.9
Cfa014008 Carpinus fangiana HOM05D003173 ORTHO05D003546 3.0e-33 146.4 268 43.7
Ciclev10002153m.g Citrus clementina HOM05D003173 ORTHO05D003546 3.9e-33 146.0 274 39.1
Manes.05G142500 Manihot esculenta HOM05D003173 ORTHO05D003546 3.9e-33 146.0 265 42.3
arahy.Tifrunner.gnm1.ann1.WLLD0D Arachis hypogaea HOM05D003173 ORTHO05D003546 5.1e-33 145.6 275 38.5
Ca_13485_v3 Cicer arietinum L. HOM05D003173 ORTHO05D003546 8.7e-33 144.8 264 38.6
Sabra05G0189700 Salix brachista HOM05D003173 ORTHO05D003546 8.7e-33 144.8 261 40.2
Potri.005G245600 Populus trichocarpa HOM05D003173 ORTHO05D003546 1.1e-32 144.4 262 40.1
Gohir.A05G255800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 1.5e-32 144.1 252 42.5
Migut.C00894 Erythranthe guttata HOM05D003173 ORTHO05D003546 3.3e-32 142.9 244 44.3
Gohir.D05G185800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 3.3e-32 142.9 266 41.7
TWI56G0288 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 4.3e-32 142.5 259 39.4
PGR031G0086 Punica granatum HOM05D003173 ORTHO05D003546 5.6e-32 142.1 285 38.2
Hma1.2p1_0023F.1_g015790 Hydrangea macrophylla HOM05D003173 ORTHO05D003546 1.3e-31 141.0 255 42.4
Lalb_Chr19g0131611 Lupinus albus HOM05D003173 ORTHO05D003546 1.6e-31 140.6 295 37.6
Gohir.D05G257500 Gossypium hirsutum HOM05D003173 ORTHO05D003546 2.8e-31 139.8 252 42.5
Gorai.009G268900 Gossypium raimondii HOM05D003173 ORTHO05D003546 2.8e-31 139.8 252 42.5
Sabra02G0013200 Salix brachista HOM05D003173 ORTHO05D003546 2.8e-31 139.8 253 41.5
VMungo0647G1822 Vigna mungo HOM05D003173 ORTHO05D003546 2.8e-31 139.8 263 40.7
CSS0021479 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 3.6e-31 139.4 258 41.1
CSS0028811 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 4.8e-31 139.0 258 41.1
Migut.N03186 Erythranthe guttata HOM05D003173 ORTHO05D003546 4.8e-31 139.0 260 40.0
Psat6g001080 Pisum sativum HOM05D003173 ORTHO05D003546 4.8e-31 139.0 265 38.5
MBI09_g01020_MAGBIO Magnolia biondii HOM05D003173 ORTHO05D003546 6.2e-31 138.7 247 39.7
TWI12G1263 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 6.2e-31 138.7 253 38.7
Phvul.009G019900 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 8.1e-31 138.3 278 38.1
TAR381G1677 Trochodendron aralioides HOM05D003173 ORTHO05D003546 8.1e-31 138.3 255 41.6
CiPaw.08G069200 Carya illinoinensis HOM05D003173 ORTHO05D003546 1.4e-30 137.5 276 40.2
VMungo1309G1265 Vigna mungo HOM05D003173 ORTHO05D003546 9.0e-30 134.8 275 37.1
Actinidia29769 Actinidia chinensis HOM05D000228 ORTHO05D001545 1.2e-29 134.4 251 40.2
Medtr3g114750 Medicago truncatula HOM05D003173 ORTHO05D003546 1.2e-29 134.4 259 40.2
Phvul.001G002200 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 1.2e-29 134.4 266 40.2
Prupe.1G359400 Prunus persica HOM05D003173 ORTHO05D003546 4.5e-29 132.5 268 39.2
SalBow7G1496 Salvia bowleyana HOM05D003173 ORTHO05D003546 4.5e-29 132.5 252 40.1
Oeu051144.1 Olea europaea HOM05D003173 ORTHO05D003546 5.8e-29 132.1 265 40.8
Lsat_1_v5_gn_8_29221 Lactuca sativa HOM05D003173 ORTHO05D003546 9.9e-29 131.3 299 36.5
Glyma.04G020700 Glycine max HOM05D003173 ORTHO05D003546 3.8e-28 129.4 274 39.1
Glyma.06G020800 Glycine max HOM05D003173 ORTHO05D003546 3.8e-28 129.4 273 37.7
Nn5g30846 Nelumbo nucifera HOM05D003173 ORTHO05D003546 4.9e-28 129.0 264 38.6
EL10Ac1g02082 Beta vulgaris HOM05D003173 ORTHO05D003546 1.9e-27 127.1 298 37.2
FvH4_2g37950 Fragaria vesca HOM05D003173 ORTHO05D003546 1.9e-27 127.1 280 37.5
TPR.G38194 Trifolium pratense HOM05D003173 ORTHO05D003546 1.9e-27 127.1 257 40.5
Medtr1g026110 Medicago truncatula HOM05D003173 ORTHO05D003546 3.2e-27 126.3 249 36.9
Atru.chr13.216 Acer truncatum HOM05D003173 ORTHO05D003546 4.2e-27 125.9 298 36.2
Dinv39556 Davidia involucrata HOM05D003173 ORTHO05D003546 9.3e-27 124.8 225 43.1
FAN15G3480 Fragaria x ananassa HOM05D003173 ORTHO05D003546 9.3e-27 124.8 281 38.4
arahy.Tifrunner.gnm1.ann1.S3QWAM Arachis hypogaea HOM05D003173 ORTHO05D003546 1.2e-26 124.4 283 37.1
arahy.Tifrunner.gnm1.ann1.YK013F Arachis hypogaea HOM05D003173 ORTHO05D003546 1.6e-26 124.0 283 36.7
FAN20G0850 Fragaria x ananassa HOM05D003173 ORTHO05D003546 1.6e-26 124.0 279 36.9
FAN27G2702 Fragaria x ananassa HOM05D003173 ORTHO05D003546 2.1e-26 123.6 279 37.3
Glyma.17G261300 Glycine max HOM05D003173 ORTHO05D003546 2.1e-26 123.6 245 39.6
ECA233G2815 Erigeron canadensis HOM05D003173 ORTHO05D003546 3.5e-26 122.9 283 32.9
Lalb_Chr23g0265991 Lupinus albus HOM05D003173 ORTHO05D003546 4.6e-26 122.5 251 40.2
Cpa.g.sc26.264 Carica papaya HOM05D003173 ORTHO05D003546 6.0e-26 122.1 257 38.1
TPR.G26427 Trifolium pratense HOM05D003173 ORTHO05D003546 6.0e-26 122.1 277 37.5
Psat5g012200 Pisum sativum HOM05D003173 ORTHO05D003546 2.3e-25 120.2 253 38.7
RcHm_v2.0_Chr6g0303671 Rosa chinensis HOM05D003173 ORTHO05D003546 3.9e-25 119.4 281 36.7
ClCG05G015410 Citrullus lanatus HOM05D003173 ORTHO05D003546 2.5e-24 116.7 255 39.6
MELO3C003727.2 Cucumis melo HOM05D003173 ORTHO05D003546 2.5e-24 116.7 254 37.8
Lsat_1_v5_gn_2_6961 Lactuca sativa HOM05D003173 ORTHO05D003546 1.6e-23 114.0 296 31.8
Sc15g0004670 Simmondsia chinensis HOM05D003173 ORTHO05D003546 1.6e-23 114.0 254 36.6
PSO541G5041 Papaver somniferum HOM05D003173 ORTHO05D003546 3.7e-23 112.8 258 35.7
Oeu039861.1 Olea europaea HOM05D003173 ORTHO05D003546 4.0e-22 109.4 189 41.8
Oeu057579.1 Olea europaea HOM05D003173 ORTHO05D003546 4.0e-22 109.4 189 41.8
Lalb_Chr08g0246301 Lupinus albus HOM05D003173 ORTHO05D003546 5.3e-22 109.0 174 41.4
Carub.0002s2296 Capsella rubella HOM05D003173 ORTHO05D003546 9.0e-22 108.2 271 35.1
DCAR_016740 Daucus carota HOM05D000228 ORTHO05D001545 1.2e-21 107.8 292 34.2
ATR0661G366 Amborella trichopoda HOM05D003173 ORTHO05D003546 1.0e-20 104.8 260 33.1
SGA_v2.0_scaffold19G08585 Striga asiatica HOM05D003173 ORTHO05D003546 1.0e-20 104.8 253 36.4
HanXRQChr14g0428491 Helianthus annuus HOM05D003173 ORTHO05D003546 1.7e-20 104.0 281 35.6
CDE05G3154 Ceratophyllum demersum HOM05D001535 ORTHO05D003710 4.9e-20 102.4 252 35.3
THA.LOC104811444 Tarenaya hassleriana HOM05D003173 ORTHO05D003546 8.4e-20 101.7 268 35.1
Hma1.2p1_1598F.1_g292960 Hydrangea macrophylla HOM05D003173 ORTHO05D003546 1.4e-19 100.9 245 37.1
Lalb_Chr03g0033561 Lupinus albus HOM05D003173 ORTHO05D003546 2.5e-19 100.1 269 33.5
Eucgr.J02492 Eucalyptus grandis HOM05D003173 ORTHO05D003546 4.2e-19 99.4 261 38.3
BraA07t31692Z Brassica rapa HOM05D003173 ORTHO05D003546 7.1e-19 98.6 264 33.7
Sp5g31190 Schrenkiella parvula HOM05D003173 ORTHO05D003546 7.1e-19 98.6 275 33.5
AT1G76070 Arabidopsis thaliana HOM05D003173 ORTHO05D003546 9.3e-19 98.2 278 33.1
Actinidia37954 Actinidia chinensis HOM05D003173 ORTHO05D003546 1.2e-18 97.8 190 40.5
Lj5g0013533 Lotus japonicus HOM05D003173 ORTHO05D003546 1.6e-18 97.4 271 33.6
A07p15840 Brassica napus HOM05D003173 ORTHO05D003546 2.7e-18 96.7 266 33.5
BraA07t29310Z Brassica rapa HOM05D003173 ORTHO05D003546 2.7e-18 96.7 266 33.5
Sp1g18040 Schrenkiella parvula HOM05D003173 ORTHO05D003546 2.7e-18 96.7 256 32.0
Thhalv10009337m.g Eutrema salsugineum HOM05D003173 ORTHO05D003546 6.0e-18 95.5 264 32.2
Duzib264G0532 Durio zibethinus HOM05D003173 ORTHO05D003546 7.9e-18 95.1 238 35.3
PSO675G7160 Papaver somniferum HOM05D003173 ORTHO05D003546 7.9e-18 95.1 263 33.8
BcaB07g32036 Brassica carinata HOM05D003173 ORTHO05D003546 1.0e-17 94.7 271 33.2
DCAR_025088 Daucus carota HOM05D003173 ORTHO05D003546 3.9e-17 92.8 283 34.3
BcaC08g47100 Brassica carinata HOM05D003173 ORTHO05D003546 1.1e-16 91.3 271 32.8
BolC6t40040H Brassica oleracea HOM05D003173 ORTHO05D003546 1.1e-16 91.3 264 32.6
BolC7t42850H Brassica oleracea HOM05D003173 ORTHO05D003546 1.5e-16 90.9 264 33.3
PGR102G2057 Punica granatum HOM05D003173 ORTHO05D003546 1.5e-16 90.9 272 34.9
BraA02t07073Z Brassica rapa HOM05D003173 ORTHO05D003546 1.9e-16 90.5 262 31.7
DCAR_009512 Daucus carota HOM05D003173 ORTHO05D003546 1.9e-16 90.5 267 32.6
A07p15740 Brassica napus HOM05D003173 ORTHO05D003546 2.5e-16 90.1 234 34.2
ECA238G0569 Erigeron canadensis HOM05D000315 ORTHO05D000527 4.3e-16 89.4 287 28.6
Lalb_Chr01g0008491 Lupinus albus HOM05D003173 ORTHO05D003546 4.3e-16 89.4 255 30.6
HPP92_002481 Vanilla planifolia HOM05D003173 ORTHO05D003546 4.3e-16 89.4 257 29.2
BcaNung03372 Brassica carinata HOM05D003173 ORTHO05D003546 5.7e-16 89.0 264 33.0
C07p23130 Brassica napus HOM05D003173 ORTHO05D003546 5.7e-16 89.0 264 33.0
AL2G36110 Arabidopsis lyrata HOM05D003173 ORTHO05D003546 7.4e-16 88.6 279 31.2
CARHR069610 Cardamine hirsuta HOM05D003173 ORTHO05D003546 7.4e-16 88.6 263 32.3
Ca_15466_v3 Cicer arietinum L. HOM05D003173 ORTHO05D003546 7.4e-16 88.6 122 49.2
A07p41630 Brassica napus HOM05D003173 ORTHO05D003546 1.6e-15 87.4 265 31.3
CsaV3_3G046130 Cucumis sativus L. HOM05D003173 ORTHO05D003546 2.8e-15 86.7 176 39.8
GSVIVG01008738001 Vitis vinifera HOM05D003173 ORTHO05D003546 2.8e-15 86.7 172 42.4
BcaC08g47302 Brassica carinata HOM05D003173 ORTHO05D003546 8.2e-15 85.1 263 31.9
A06p16390 Brassica napus HOM05D003173 ORTHO05D003546 8.2e-15 85.1 266 33.1
BraA06t24743Z Brassica rapa HOM05D003173 ORTHO05D003546 8.2e-15 85.1 264 31.4
A02p20410 Brassica napus HOM05D003173 ORTHO05D003546 1.4e-14 84.3 249 29.3
C02p33480 Brassica napus HOM05D003173 ORTHO05D003546 3.1e-14 83.2 252 29.4
BcaC05g25935 Brassica carinata HOM05D003173 ORTHO05D003546 4.1e-14 82.8 267 31.5
C05p18890 Brassica napus HOM05D003173 ORTHO05D003546 4.1e-14 82.8 267 31.5
BolC2t09356H Brassica oleracea HOM05D003173 ORTHO05D003546 4.1e-14 82.8 252 29.4
Thhalv10018992m.g Eutrema salsugineum HOM05D003173 ORTHO05D003546 4.1e-14 82.8 278 31.3
Sed0006911 Sechium edule HOM05D003173 ORTHO05D003546 4.1e-14 82.8 237 35.0
unitig_32.g11393 Utricularia gibba HOM05D002221 ORTHO05D002626 6.9e-14 82.0 199 32.7
AL1G33140 Arabidopsis lyrata HOM05D003173 ORTHO05D003546 9.0e-14 81.6 228 30.3
BcaC03g15643 Brassica carinata HOM05D003173 ORTHO05D003546 9.0e-14 81.6 252 29.0
BolC5t30588H Brassica oleracea HOM05D003173 ORTHO05D003546 9.0e-14 81.6 267 31.5
BcaB03g14324 Brassica carinata HOM05D003173 ORTHO05D003546 1.2e-13 81.3 262 30.5
Carub.0001s1981 Capsella rubella HOM05D003173 ORTHO05D003546 1.5e-13 80.9 268 28.7
Os09g0542900 Oryza sativa ssp. japonica HOM05D003173 ORTHO05D003546 4.5e-13 79.3 232 29.3
unitig_748.g7605 Utricularia gibba HOM05D003173 ORTHO05D003546 7.6e-13 78.6 183 37.2
AT1G20310 Arabidopsis thaliana HOM05D003173 ORTHO05D003546 2.9e-12 76.6 267 30.0
CARHR020790 Cardamine hirsuta HOM05D003173 ORTHO05D003546 3.8e-12 76.3 265 29.1
Zm00001eb103980 Zea mays HOM05D003173 ORTHO05D003546 3.8e-12 76.3 235 30.2
BcaB05g24968 Brassica carinata HOM05D003173 ORTHO05D003546 6.5e-12 75.5 255 29.8
Ah.00g000650 Amaranthus hybridus HOM05D003173 ORTHO05D003546 1.9e-11 73.9 118 39.8
CDE05G2702 Ceratophyllum demersum HOM05D003173 ORTHO05D003546 9.3e-11 71.6 197 32.0
Thecc.01G011100 Theobroma cacao HOM05D003173 ORTHO05D003546 9.3e-11 71.6 249 30.5
COL.COLO4_22498 Corchorus olitorius HOM05D003173 ORTHO05D003546 1.2e-10 71.2 182 36.8
SHI05037 Sapria himalayana HOM05D003173 ORTHO05D003546 1.2e-10 71.2 214 32.2
SHI08021 Sapria himalayana HOM05D003173 ORTHO05D003546 1.6e-10 70.9 214 32.2
Potri.005G107500 Populus trichocarpa HOM05D003173 ORTHO05D003546 2.1e-10 70.5 246 25.6
Aa31LG4G6190 Aethionema arabicum HOM05D003173 ORTHO05D003546 3.5e-10 69.7 285 26.7
SHI13075 Sapria himalayana HOM05D003173 ORTHO05D003546 6.1e-10 68.9 214 31.8
BcaC08g47295 Brassica carinata HOM05D003173 ORTHO05D003546 2.3e-09 67.0 103 39.8
HanXRQChr12g0366681 Helianthus annuus HOM05D003173 ORTHO05D003546 8.7e-09 65.1 210 29.0
C06p50010 Brassica napus HOM05D003173 ORTHO05D003546 3.3e-08 63.2 201 31.8
Gohir.D12G058500 Gossypium hirsutum HOM05D003173 ORTHO05D003546 4.3e-08 62.8 243 29.2
Gorai.008G061700 Gossypium raimondii HOM05D003173 ORTHO05D003546 5.7e-08 62.4 244 28.7
Gohir.A12G058500 Gossypium hirsutum HOM05D003173 ORTHO05D003546 9.7e-08 61.6 243 29.2
TWI73G0798 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 1.3e-07 61.2 259 29.0
Aa31LG7G4670 Aethionema arabicum HOM05D003173 ORTHO05D003546 2.2e-07 60.5 206 30.1
MBI17_g07971_MAGBIO Magnolia biondii HOM05D003173 ORTHO05D003546 8.2e-07 58.5 204 28.9
Zm00001eb331720 Zea mays HOM05D003173 ORTHO05D003546 4.1e-06 56.2 236 29.2
HanXRQChr12g0366691 Helianthus annuus HOM05D003173 ORTHO05D003546 9.0e-06 55.1 245 24.5
Medtr8g074760 Medicago truncatula HOM05D003173 ORTHO05D003546 9.0e-06 55.1 179 34.6


User provided reference genes

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