Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000498g0070 Nicotiana tabacum HOM05D000086 ORTHO05D005495 5.2e-39 164.1 93 100.0
Nitab4.5_0005433g0010 Nicotiana tabacum HOM05D000086 ORTHO05D005495 2.1e-32 142.1 83 95.2
Solyc12g094385.1 Solanum lycopersicum HOM05D000086 ORTHO05D005495 8.9e-23 110.2 83 72.3
Sopen12g031270 Solanum pennellii HOM05D000086 ORTHO05D005495 4.4e-22 107.8 83 71.1
Peaxi162Scf00289g00074 Petunia axillaris HOM05D000086 ORTHO05D005495 3.0e-18 95.1 83 63.9
Nitab4.5_0004361g0050 Nicotiana tabacum HOM05D000086 ORTHO05D005495 3.9e-18 94.7 83 60.2
Manes.18G010000 Manihot esculenta HOM05D000086 ORTHO05D005495 5.1e-18 94.4 92 57.6
Manes.05G143500 Manihot esculenta HOM05D000086 ORTHO05D005495 1.1e-17 93.2 90 55.6
Cc10_g01210 Coffea canephora HOM05D000086 ORTHO05D005495 3.3e-17 91.7 83 57.8
Peaxi162Scf00772g00016 Petunia axillaris HOM05D000086 ORTHO05D005495 9.6e-17 90.1 83 60.2
Ah.00g000700 Amaranthus hybridus HOM05D000086 ORTHO05D005495 1.6e-16 89.4 83 59.0
Glyma.04G021200 Glycine max HOM05D000086 ORTHO05D005495 1.6e-16 89.4 83 59.0
Sc15g0004700 Simmondsia chinensis HOM05D000086 ORTHO05D005495 2.1e-16 89.0 90 53.3
PGSC0003DMG400009881 Solanum tuberosum HOM05D000086 ORTHO05D005495 2.1e-16 89.0 83 59.0
Sopen04g035520 Solanum pennellii HOM05D000086 ORTHO05D005495 4.7e-16 87.8 83 59.0
DCAR_016739 Daucus carota HOM05D000086 ORTHO05D005495 8.1e-16 87.0 83 55.4
Migut.C00892 Erythranthe guttata HOM05D000086 ORTHO05D005495 8.1e-16 87.0 85 57.6
Sc02g0008810 Simmondsia chinensis HOM05D000086 ORTHO05D005495 8.1e-16 87.0 84 57.1
Solyc04g081890.1 Solanum lycopersicum HOM05D000086 ORTHO05D005495 8.1e-16 87.0 83 57.8
arahy.Tifrunner.gnm1.ann1.XEB2B9 Arachis hypogaea HOM05D000086 ORTHO05D005495 1.4e-15 86.3 83 57.8
AUR62013893 Chenopodium quinoa HOM05D000003 ORTHO05D005495 1.8e-15 85.9 83 56.6
Potri.005G244500 Populus trichocarpa HOM05D000086 ORTHO05D005495 1.8e-15 85.9 83 59.0
AUR62036701 Chenopodium quinoa HOM05D000086 ORTHO05D005495 2.4e-15 85.5 83 55.4
COL.COLO4_26096 Corchorus olitorius HOM05D000086 ORTHO05D005495 2.4e-15 85.5 83 56.6
VMungo1309G0612 Vigna mungo HOM05D000086 ORTHO05D005495 2.4e-15 85.5 83 59.0
Atru.chr13.228 Acer truncatum HOM05D000086 ORTHO05D005495 3.1e-15 85.1 83 54.2
ECA233G5046 Erigeron canadensis HOM05D000086 ORTHO05D005495 3.1e-15 85.1 83 54.2
Glyma.06G021400 Glycine max HOM05D000086 ORTHO05D005495 3.1e-15 85.1 83 56.6
Potri.002G017400 Populus trichocarpa HOM05D000086 ORTHO05D005495 4.0e-15 84.7 84 57.1
Lalb_Chr03g0033551 Lupinus albus HOM05D000086 ORTHO05D005495 5.2e-15 84.3 83 55.4
GSVIVG01008756001 Vitis vinifera HOM05D000086 ORTHO05D005495 5.2e-15 84.3 84 56.0
Glyma.14G221800 Glycine max HOM05D000086 ORTHO05D005495 8.9e-15 83.6 83 54.2
Oeu026124.1 Olea europaea HOM05D000086 ORTHO05D005495 8.9e-15 83.6 83 54.2
EL10Ac1g02113 Beta vulgaris HOM05D000086 ORTHO05D005495 1.2e-14 83.2 83 54.2
HanXRQChr14g0429591 Helianthus annuus HOM05D000086 ORTHO05D005495 1.2e-14 83.2 83 51.8
Lalb_Chr19g0131551 Lupinus albus HOM05D000157 ORTHO05D005495 1.2e-14 83.2 79 51.9
Phvul.009G019300 Phaseolus vulgaris HOM05D000086 ORTHO05D005495 1.2e-14 83.2 86 55.8
Sabra05G0189100 Salix brachista HOM05D000086 ORTHO05D005495 1.2e-14 83.2 84 56.0
CSS0030807 Camellia sinensis var. sinensis HOM05D000086 ORTHO05D005495 1.5e-14 82.8 83 54.2
CSS0050287 Camellia sinensis var. sinensis HOM05D000086 ORTHO05D005495 1.5e-14 82.8 83 54.2
Ca_15471_v3 Cicer arietinum L. HOM05D000086 ORTHO05D005495 1.5e-14 82.8 83 51.8
Duzib093G0904 Durio zibethinus HOM05D000086 ORTHO05D005495 1.5e-14 82.8 83 56.6
Hma1.2p1_0023F.1_g015760 Hydrangea macrophylla HOM05D000086 ORTHO05D005495 1.5e-14 82.8 83 55.4
Thecc.08G050200 Theobroma cacao HOM05D000086 ORTHO05D005495 2.0e-14 82.4 83 56.6
Haze_22691 Corylus avellana HOM05D000086 ORTHO05D005495 3.4e-14 81.6 91 50.5
FvH4_2g38021 Fragaria vesca HOM05D000086 ORTHO05D005495 3.4e-14 81.6 83 54.2
Lalb_Chr23g0266041 Lupinus albus HOM05D000086 ORTHO05D005495 3.4e-14 81.6 91 50.5
Lj5g0000916 Lotus japonicus HOM05D000086 ORTHO05D005495 4.4e-14 81.3 87 54.0
QL02p012665 Quercus lobata HOM05D000086 ORTHO05D005495 4.4e-14 81.3 83 54.2
VMungo0647G2197 Vigna mungo HOM05D000086 ORTHO05D005495 4.4e-14 81.3 83 54.2
Cfa013998 Carpinus fangiana HOM05D000086 ORTHO05D005495 5.8e-14 80.9 91 50.5
Gohir.A06G001300 Gossypium hirsutum HOM05D000086 ORTHO05D005495 5.8e-14 80.9 83 54.2
Lsat_1_v5_gn_8_29501 Lactuca sativa HOM05D000086 ORTHO05D005495 5.8e-14 80.9 83 54.2
TPR.G38345 Trifolium pratense HOM05D000086 ORTHO05D005495 5.8e-14 80.9 83 50.6
CANSAT25G1812 Cannabis sativa HOM05D000086 ORTHO05D005495 7.6e-14 80.5 83 55.4
Duzib116G0412 Durio zibethinus HOM05D000086 ORTHO05D005495 7.6e-14 80.5 83 56.6
FAN15G1857 Fragaria x ananassa HOM05D000086 ORTHO05D005495 7.6e-14 80.5 83 53.0
Glyma.17G260700 Glycine max HOM05D000086 ORTHO05D005495 7.6e-14 80.5 83 53.0
Gohir.D05G186600 Gossypium hirsutum HOM05D000086 ORTHO05D005495 7.6e-14 80.5 83 55.4
Gorai.009G191900 Gossypium raimondii HOM05D000086 ORTHO05D005495 7.6e-14 80.5 83 55.4
Gorai.010G001500 Gossypium raimondii HOM05D000086 ORTHO05D005495 7.6e-14 80.5 83 54.2
FAN27G0508 Fragaria x ananassa HOM05D000086 ORTHO05D005495 9.9e-14 80.1 83 51.8
SGA_v2.0_scaffold292G47385 Striga asiatica HOM05D000086 ORTHO05D005495 9.9e-14 80.1 83 53.0
FAN20G1138 Fragaria x ananassa HOM05D000086 ORTHO05D005495 1.3e-13 79.7 83 53.0
Phvul.001G003400 Phaseolus vulgaris HOM05D000086 ORTHO05D005495 1.3e-13 79.7 83 54.2
Cpa.g.sc26.274 Carica papaya HOM05D000086 ORTHO05D005495 1.7e-13 79.3 83 55.4
Gohir.A05G183900 Gossypium hirsutum HOM05D000086 ORTHO05D005495 1.7e-13 79.3 83 54.2
MD15G1007400 Malus domestica HOM05D000086 ORTHO05D005495 1.7e-13 79.3 84 52.4
Sabra02G0013900 Salix brachista HOM05D000086 ORTHO05D005495 1.7e-13 79.3 84 54.8
PGSC0003DMG400029328 Solanum tuberosum HOM05D000086 ORTHO05D005495 2.2e-13 79.0 90 56.7
Medtr3g114500 Medicago truncatula HOM05D000086 ORTHO05D005495 3.8e-13 78.2 83 55.4
TWI56G1323 Tripterygium wilfordii HOM05D000086 ORTHO05D005495 3.8e-13 78.2 83 51.8
Peaxi162Scf00174g00056 Petunia axillaris HOM05D000086 ORTHO05D005495 6.4e-13 77.4 68 57.4
HanXRQChr12g0366761 Helianthus annuus HOM05D000086 ORTHO05D005495 8.4e-13 77.0 83 50.6
RcHm_v2.0_Chr6g0303581 Rosa chinensis HOM05D000086 ORTHO05D005495 8.4e-13 77.0 83 53.0
Ah.11g040130 Amaranthus hybridus HOM05D000086 ORTHO05D005495 1.1e-12 76.6 83 48.2
Ca_13481_v3 Cicer arietinum L. HOM05D000086 ORTHO05D005495 1.1e-12 76.6 83 49.4
Lsat_1_v5_gn_2_7621 Lactuca sativa HOM05D000086 ORTHO05D005495 1.1e-12 76.6 83 50.6
TPR.G16964 Trifolium pratense HOM05D000086 ORTHO05D005495 1.4e-12 76.3 83 49.4
TPR.G38204 Trifolium pratense HOM05D000086 ORTHO05D005495 1.4e-12 76.3 83 49.4
Cfa014000 Carpinus fangiana HOM05D000086 ORTHO05D005495 4.2e-12 74.7 91 46.2
CiPaw.07G144300 Carya illinoinensis HOM05D000086 ORTHO05D005495 7.1e-12 73.9 83 50.6
Haze_22693 Corylus avellana HOM05D000086 ORTHO05D005495 7.1e-12 73.9 91 47.3
Psat6g001320 Pisum sativum HOM05D000086 ORTHO05D005495 9.3e-12 73.6 83 49.4
Lj4P800T16 Lonicera japonica HOM05D000086 ORTHO05D005495 1.6e-11 72.8 83 50.6
THA.LOC104806061 Tarenaya hassleriana HOM05D000086 ORTHO05D005495 2.1e-11 72.4 86 48.8
Ciclev10002708m.g Citrus clementina HOM05D000086 ORTHO05D005495 3.5e-11 71.6 83 49.4
Prupe.1G360300 Prunus persica HOM05D000086 ORTHO05D005495 1.0e-10 70.1 88 48.9
Medtr1g026070 Medicago truncatula HOM05D000086 ORTHO05D005495 1.3e-10 69.7 83 47.0
HanXRQChr13g0387001 Helianthus annuus HOM05D000086 ORTHO05D005495 2.3e-10 68.9 83 47.0
Oeu014022.1 Olea europaea HOM05D000086 ORTHO05D005495 3.0e-10 68.6 84 47.6
THA.LOC104813221 Tarenaya hassleriana HOM05D000086 ORTHO05D005495 3.0e-10 68.6 86 45.3
TPR.G26380 Trifolium pratense HOM05D000086 ORTHO05D005495 3.0e-10 68.6 83 44.6
MD08G1008600 Malus domestica HOM05D000086 ORTHO05D005495 3.9e-10 68.2 84 45.2
Actinidia15457 Actinidia chinensis HOM05D000086 ORTHO05D005495 8.7e-10 67.0 68 54.4
PGR083G1632 Punica granatum HOM05D000157 ORTHO05D005495 1.1e-09 66.6 84 48.8
Nn5g30836 Nelumbo nucifera HOM05D000086 ORTHO05D005495 1.5e-09 66.2 83 48.2
Rhsim06G0013000 Rhododendron simsii HOM05D000086 ORTHO05D005495 3.3e-09 65.1 68 52.9
SGA_v2.0_scaffold145G36087 Striga asiatica HOM05D000086 ORTHO05D005495 1.6e-08 62.8 83 43.4
Aa31LG9G12300 Aethionema arabicum HOM05D000086 ORTHO05D005495 4.8e-08 61.2 86 44.2
Thecc.07G152300 Theobroma cacao HOM05D000086 ORTHO05D005495 6.2e-08 60.8 83 45.8
Nitab4.5_0001936g0020 Nicotiana tabacum HOM05D000086 ORTHO05D005495 1.1e-07 60.1 83 47.0
SpUn1114_0010 Schrenkiella parvula HOM05D000086 ORTHO05D005495 1.1e-07 60.1 86 41.9
BcaB02g11383 Brassica carinata HOM05D000086 ORTHO05D005495 2.4e-07 58.9 86 43.0
AL25U10020 Arabidopsis lyrata HOM05D000086 ORTHO05D005495 3.1e-07 58.5 86 40.7
AL8G19580 Arabidopsis lyrata HOM05D000086 ORTHO05D005495 3.1e-07 58.5 86 40.7
AT5G42200 Arabidopsis thaliana HOM05D000086 ORTHO05D005495 4.0e-07 58.2 86 40.7
Nitab4.5_0002730g0010 Nicotiana tabacum HOM05D000086 ORTHO05D005495 6.9e-07 57.4 35 71.4
A02p27040 Brassica napus HOM05D000086 ORTHO05D005495 1.5e-06 56.2 89 41.6
BraA02t07721Z Brassica rapa HOM05D000086 ORTHO05D005495 1.5e-06 56.2 89 41.6
CARHR184540 Cardamine hirsuta HOM05D000157 ORTHO05D005495 2.6e-06 55.5 86 41.9
FvH4_4g22111 Fragaria vesca HOM05D000086 ORTHO05D005495 3.4e-06 55.1 82 40.2
FAN12G0929 Fragaria x ananassa HOM05D000086 ORTHO05D005495 3.4e-06 55.1 82 40.2
BcaC03g16473 Brassica carinata HOM05D000086 ORTHO05D005495 4.4e-06 54.7 89 40.4
C02p42820 Brassica napus HOM05D000086 ORTHO05D005495 4.4e-06 54.7 89 40.4
Lj1g0006199 Lotus japonicus HOM05D000086 ORTHO05D005495 4.4e-06 54.7 73 41.1
CSS0026950 Camellia sinensis var. sinensis HOM05D000086 ORTHO05D005495 9.9e-06 53.5 83 44.6
Nitab4.5_0004361g0080 Nicotiana tabacum HOM05D000086 ORTHO05D005495 9.9e-06 53.5 42 59.5


User provided reference genes

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