Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000495g0010 Nicotiana tabacum HOM05D004986 ORTHO05D005898 6.3e-230 800.4 406 100.0
Nitab4.5_0004269g0070 Nicotiana tabacum HOM05D004986 ORTHO05D005898 5.0e-219 764.2 406 95.1
PGSC0003DMG400018667 Solanum tuberosum HOM05D004986 ORTHO05D005898 1.2e-193 679.9 406 83.5
Sopen03g005900 Solanum pennellii HOM05D004986 ORTHO05D005898 2.0e-191 672.5 406 82.5
Solyc03g032050.4 Solanum lycopersicum HOM05D004986 ORTHO05D005898 5.7e-191 671.0 406 82.3
Peaxi162Scf00920g00114 Petunia axillaris HOM05D004986 ORTHO05D005898 4.8e-190 667.9 417 83.7
CAN.G647.4 Capsicum annuum HOM05D004986 ORTHO05D005898 2.4e-189 665.6 406 82.3
Dinv28304 Davidia involucrata HOM05D004986 ORTHO05D005898 2.7e-156 555.8 409 70.2
CSS0007723 Camellia sinensis var. sinensis HOM05D004986 ORTHO05D005898 5.1e-147 525.0 398 68.6
Hma1.2p1_0085F.1_g044450 Hydrangea macrophylla HOM05D004986 ORTHO05D005898 1.1e-146 523.9 405 66.7
Cc07_g12070 Coffea canephora HOM05D004986 ORTHO05D005898 4.3e-146 521.9 415 65.3
DCAR_024399 Daucus carota HOM05D004986 ORTHO05D005898 2.8e-145 519.2 399 66.7
Actinidia32993 Actinidia chinensis HOM05D004986 ORTHO05D005898 4.7e-145 518.5 401 66.8
Actinidia22885 Actinidia chinensis HOM05D004986 ORTHO05D005898 1.9e-141 506.5 400 66.2
Rhsim10G0191900 Rhododendron simsii HOM05D004986 ORTHO05D005898 7.1e-141 504.6 396 66.2
GSVIVG01022308001 Vitis vinifera HOM05D004986 ORTHO05D005898 3.5e-140 502.3 403 64.3
Oeu002901.1 Olea europaea HOM05D004986 ORTHO05D005898 4.3e-138 495.4 410 62.7
QL11p035166 Quercus lobata HOM05D004986 ORTHO05D005898 7.3e-138 494.6 393 65.4
Manes.02G115500 Manihot esculenta HOM05D004986 ORTHO05D005898 1.8e-136 490.0 403 62.8
Atru.chr10.1816 Acer truncatum HOM05D004986 ORTHO05D005898 1.2e-135 487.3 401 63.1
Atru.chr10.1831 Acer truncatum HOM05D004986 ORTHO05D005898 9.9e-135 484.2 402 63.2
MSTRG.17107 Avicennia marina HOM05D004986 ORTHO05D005898 4.2e-133 478.8 401 62.3
Migut.B01487 Erythranthe guttata HOM05D004986 ORTHO05D005898 9.3e-133 477.6 397 61.7
CANSAT21G0416 Cannabis sativa HOM05D004986 ORTHO05D005898 4.6e-132 475.3 406 61.8
Cfa007104 Carpinus fangiana HOM05D004986 ORTHO05D005898 6.0e-132 474.9 409 61.4
Lj3g0020964 Lotus japonicus HOM05D004986 ORTHO05D005898 7.9e-132 474.6 398 61.6
Ciclev10025602m.g Citrus clementina HOM05D004986 ORTHO05D005898 2.3e-131 473.0 410 61.0
TAR628G0962 Trochodendron aralioides HOM05D004986 ORTHO05D005898 3.0e-131 472.6 401 61.6
CiPaw.07G000800 Carya illinoinensis HOM05D004986 ORTHO05D005898 1.1e-130 470.7 393 62.3
Manes.01G157000 Manihot esculenta HOM05D004986 ORTHO05D005898 5.6e-130 468.4 403 60.5
HanXRQChr10g0316221 Helianthus annuus HOM05D004986 ORTHO05D005898 7.4e-130 468.0 390 62.1
SalBow5G3763 Salvia bowleyana HOM05D004986 ORTHO05D005898 9.6e-130 467.6 398 61.1
PGR119G1257 Punica granatum HOM05D004986 ORTHO05D005898 1.6e-129 466.8 400 62.2
Ca_02840_v3 Cicer arietinum L. HOM05D004986 ORTHO05D005898 2.8e-129 466.1 406 59.4
Lalb_Chr05g0214931 Lupinus albus HOM05D004986 ORTHO05D005898 2.4e-128 463.0 401 61.1
Phvul.010G020700 Phaseolus vulgaris HOM05D004986 ORTHO05D005898 4.5e-127 458.8 394 58.4
Hund21384 Selenicereus undatus HOM05D004986 ORTHO05D005898 4.5e-127 458.8 406 59.9
TWI53G0851 Tripterygium wilfordii HOM05D004986 ORTHO05D005898 4.5e-127 458.8 395 59.7
vmacro20612 Vaccinium macrocarpon HOM05D004986 ORTHO05D005898 5.8e-127 458.4 398 61.3
Medtr8g073110 Medicago truncatula HOM05D004986 ORTHO05D005898 1.7e-126 456.8 394 59.1
Lj2C503G0 Lonicera japonica HOM05D004986 ORTHO05D005898 3.8e-126 455.7 379 65.2
arahy.Tifrunner.gnm1.ann1.H550X0 Arachis hypogaea HOM05D004986 ORTHO05D005898 2.4e-125 453.0 390 59.5
Prupe.7G185600 Prunus persica HOM05D004986 ORTHO05D005898 4.2e-125 452.2 405 61.5
AT5G65960 Arabidopsis thaliana HOM05D004986 ORTHO05D005898 5.5e-125 451.8 393 59.5
Nn5g31026 Nelumbo nucifera HOM05D004986 ORTHO05D005898 7.1e-125 451.4 472 54.2
Cpa.g.sc91.49 Carica papaya HOM05D004986 ORTHO05D005898 3.5e-124 449.1 398 59.3
Lsat_1_v5_gn_2_73561 Lactuca sativa HOM05D004986 ORTHO05D005898 3.5e-124 449.1 398 59.5
Psat4g105800 Pisum sativum HOM05D004986 ORTHO05D005898 3.5e-124 449.1 409 57.2
Carub.0008s2856 Capsella rubella HOM05D004986 ORTHO05D005898 6.0e-124 448.4 393 59.3
PSO170G5246 Papaver somniferum HOM05D004986 ORTHO05D005898 6.0e-124 448.4 407 60.0
TAR381G0383 Trochodendron aralioides HOM05D004986 ORTHO05D005898 6.0e-124 448.4 396 59.6
Thecc.01G002600 Theobroma cacao HOM05D004986 ORTHO05D005898 1.8e-123 446.8 395 59.2
VMungo0331G1669 Vigna mungo HOM05D004986 ORTHO05D005898 1.8e-123 446.8 394 57.9
ECA240G4103 Erigeron canadensis HOM05D004986 ORTHO05D005898 3.9e-123 445.7 394 60.2
AL8G45680 Arabidopsis lyrata HOM05D004986 ORTHO05D005898 6.7e-123 444.9 394 59.1
Glyma.16G112300 Glycine max HOM05D004986 ORTHO05D005898 1.1e-122 444.1 389 58.1
Haze_03636 Corylus avellana HOM05D004986 ORTHO05D005898 7.4e-122 441.4 449 55.2
Aqoxy6G01559 Aquilegia oxysepala HOM05D004986 ORTHO05D005898 1.3e-121 440.7 408 56.9
Thhalv10004346m.g Eutrema salsugineum HOM05D004986 ORTHO05D005898 1.3e-121 440.7 395 60.3
Glyma.09G196600 Glycine max HOM05D004986 ORTHO05D005898 1.6e-121 440.3 389 58.1
RcHm_v2.0_Chr2g0096901 Rosa chinensis HOM05D004986 ORTHO05D005898 2.1e-121 439.9 404 57.9
FvH4_1g10130 Fragaria vesca HOM05D004986 ORTHO05D005898 4.8e-121 438.7 398 59.0
FAN23G1121 Fragaria x ananassa HOM05D004986 ORTHO05D005898 4.8e-121 438.7 398 59.0
Sp2g30730 Schrenkiella parvula HOM05D004986 ORTHO05D005898 6.2e-121 438.3 394 58.9
Eucgr.I02210 Eucalyptus grandis HOM05D004986 ORTHO05D005898 3.1e-120 436.0 407 59.0
FAN19G1207 Fragaria x ananassa HOM05D004986 ORTHO05D005898 5.3e-120 435.3 398 58.8
Aa31LG1G14460 Aethionema arabicum HOM05D004986 ORTHO05D005898 6.9e-120 434.9 394 59.1
FAN26G2552 Fragaria x ananassa HOM05D004986 ORTHO05D005898 1.2e-119 434.1 399 59.4
FAN28G2129 Fragaria x ananassa HOM05D004986 ORTHO05D005898 1.2e-119 434.1 399 59.4
FAN23G2177 Fragaria x ananassa HOM05D004986 ORTHO05D005898 2.6e-119 433.0 398 58.8
Sed0027663 Sechium edule HOM05D004986 ORTHO05D005898 2.6e-119 433.0 395 58.2
CsaV3_4G027660 Cucumis sativus L. HOM05D004986 ORTHO05D005898 1.3e-118 430.6 392 57.1
MD15G1228500 Malus domestica HOM05D004986 ORTHO05D005898 1.7e-118 430.3 406 57.6
ClCG04G005010 Citrullus lanatus HOM05D004986 ORTHO05D005898 8.4e-118 427.9 391 57.0
MELO3C026343.2 Cucumis melo HOM05D004986 ORTHO05D005898 1.1e-117 427.6 393 59.0
Duzib106G1274 Durio zibethinus HOM05D004986 ORTHO05D005898 1.4e-117 427.2 399 56.6
THA.LOC104826450 Tarenaya hassleriana HOM05D004986 ORTHO05D005898 2.5e-117 426.4 387 58.9
arahy.Tifrunner.gnm1.ann1.UZ6AL0 Arachis hypogaea HOM05D004986 ORTHO05D005898 4.2e-117 425.6 427 54.1
SGA_v2.0_scaffold34G13577 Striga asiatica HOM05D004986 ORTHO05D005898 1.6e-116 423.7 423 54.1
unitig_26.g8860 Utricularia gibba HOM05D004986 ORTHO05D005898 7.9e-116 421.4 396 57.1
Sabra02G0136200 Salix brachista HOM05D004986 ORTHO05D005898 6.7e-115 418.3 401 58.9
EL10Ac3g05234 Beta vulgaris HOM05D004986 ORTHO05D005898 8.2e-113 411.4 390 55.4
CARHR257450 Cardamine hirsuta HOM05D004986 ORTHO05D005898 1.4e-112 410.6 393 57.3
SGA_v2.0_scaffold52G19267 Striga asiatica HOM05D004986 ORTHO05D005898 1.4e-112 410.6 367 59.4
A09p10240 Brassica napus HOM05D004986 ORTHO05D005898 3.1e-112 409.5 380 56.8
Gohir.D03G000700 Gossypium hirsutum HOM05D004986 ORTHO05D005898 3.4e-111 406.0 393 55.7
Gohir.A02G179000 Gossypium hirsutum HOM05D004986 ORTHO05D005898 7.7e-111 404.8 421 52.7
Gohir.A02G055800 Gossypium hirsutum HOM05D004986 ORTHO05D005898 1.9e-109 400.2 414 51.9
Gorai.005G068600 Gossypium raimondii HOM05D004986 ORTHO05D005898 1.9e-109 400.2 414 51.7
Gorai.003G001100 Gossypium raimondii HOM05D004986 ORTHO05D005898 2.5e-109 399.8 412 53.2
C09p12150 Brassica napus HOM05D004986 ORTHO05D005898 7.2e-109 398.3 396 54.8
BolC9t54105H Brassica oleracea HOM05D004986 ORTHO05D005898 3.6e-108 396.0 396 54.5
Gohir.D02G061000 Gossypium hirsutum HOM05D004986 ORTHO05D005898 7.9e-108 394.8 414 51.2
BcaC04g23101 Brassica carinata HOM05D004986 ORTHO05D005898 1.4e-107 394.0 396 54.3
BraA09t36669Z Brassica rapa HOM05D004986 ORTHO05D005898 1.4e-107 394.0 393 55.5
Os04g0584800 Oryza sativa ssp. japonica HOM05D004986 ORTHO05D005898 2.3e-107 393.3 413 51.3
Ah.10g026930 Amaranthus hybridus HOM05D004986 ORTHO05D005898 5.7e-106 388.7 392 53.3
AUR62006055 Chenopodium quinoa HOM05D004986 ORTHO05D005898 1.2e-103 380.9 393 52.9
Zm00001eb072790 Zea mays HOM05D004986 ORTHO05D005898 2.2e-102 376.7 414 49.3
HPP92_007280 Vanilla planifolia HOM05D004986 ORTHO05D005898 5.0e-102 375.6 396 52.0
Hma1.2p1_0085F.1_g044460 Hydrangea macrophylla HOM05D004986 ORTHO05D005898 1.4e-101 374.0 287 64.8
BcaB04g20132 Brassica carinata HOM05D004986 ORTHO05D005898 1.9e-101 373.6 391 53.2
Potri.002G177100 Populus trichocarpa HOM05D004986 ORTHO05D005898 3.3e-98 362.8 312 62.2
MBI13_g20494_MAGBIO Magnolia biondii HOM05D004986 ORTHO05D005898 2.2e-97 360.1 477 47.0
ATR0807G113 Amborella trichopoda HOM05D004986 ORTHO05D005898 7.2e-93 345.1 461 46.2
Psat0s3210g0040 Pisum sativum HOM05D004986 ORTHO05D005898 7.2e-93 345.1 308 56.5
CARHR281810 Cardamine hirsuta HOM05D004986 ORTHO05D005898 1.1e-90 337.8 268 61.9
Sc05g0009010 Simmondsia chinensis HOM05D004986 ORTHO05D005898 4.1e-88 329.3 349 55.3
COL.COLO4_34271 Corchorus olitorius HOM05D004986 ORTHO05D005898 5.5e-85 318.9 392 47.4
SEGI_13138 Sequoiadendron giganteum HOM05D004986 ORTHO05D005898 8.8e-83 311.6 401 43.4
Dinv40206 Davidia involucrata HOM05D004986 ORTHO05D005898 2.0e-82 310.5 242 67.8
Potri.007G064500 Populus trichocarpa HOM05D004986 ORTHO05D005898 2.2e-81 307.0 375 47.2
Oeu037412.2 Olea europaea HOM05D004986 ORTHO05D005898 7.0e-80 302.0 399 48.1
Atru.chr3.37 Acer truncatum HOM05D004986 ORTHO05D005898 2.3e-75 287.0 409 44.5
CDE04G0629 Ceratophyllum demersum HOM05D004986 ORTHO05D005898 5.2e-75 285.8 398 43.7
Mapoly0024s0125 Marchantia polymorpha HOM05D004986 ORTHO05D005898 2.0e-74 283.9 434 39.9
Lj4g0017944 Lotus japonicus HOM05D004986 ORTHO05D005898 1.4e-72 277.7 374 45.2
SMO147G0325 Selaginella moellendorffii HOM05D004986 ORTHO05D005898 2.1e-68 263.8 415 41.0
Pp3c17_5460 Physcomitrium patens HOM05D004986 ORTHO05D005898 5.2e-67 259.2 456 38.4
AagrBONN_evm.TU.Sc2ySwM_362.836 Anthoceros agrestis HOM05D004986 ORTHO05D005898 7.0e-64 248.8 465 37.8
HanXRQChr13g0388311 Helianthus annuus HOM05D004986 ORTHO05D005898 2.9e-62 243.4 213 61.0
CDE07G1230 Ceratophyllum demersum HOM05D004986 ORTHO05D005898 3.2e-56 223.4 267 45.3
HanXRQChr13g0388301 Helianthus annuus HOM05D004986 ORTHO05D005898 1.0e-54 218.4 180 61.7
MD02G1112100 Malus domestica HOM05D004986 ORTHO05D005898 1.2e-52 211.5 192 54.2
Sed0024004 Sechium edule HOM05D004986 ORTHO05D005898 2.1e-52 210.7 307 44.0
SGA_v2.0_scaffold578G53029 Striga asiatica HOM05D004986 ORTHO05D005898 8.3e-49 198.7 189 58.2
MD02G1109300 Malus domestica HOM05D004986 ORTHO05D005898 2.7e-39 167.2 172 52.3
MD02G1113000 Malus domestica HOM05D004986 ORTHO05D005898 8.6e-38 162.2 159 52.8
AUR62035574 Chenopodium quinoa HOM05D004986 ORTHO05D005898 4.3e-37 159.8 174 47.7
Atru.chr3.33 Acer truncatum HOM05D004986 ORTHO05D005898 5.2e-35 152.9 110 66.4
Atru.chr3.32 Acer truncatum HOM05D004986 ORTHO05D005898 5.1e-30 136.3 175 48.6
CBR_g24177 Chara braunii HOM05D004986 ORTHO05D005898 1.9e-29 134.4 266 37.2
TPR.G33051 Trifolium pratense HOM05D004986 ORTHO05D005898 1.3e-28 131.7 104 61.5
MD02G1113100 Malus domestica HOM05D004986 ORTHO05D005898 5.4e-24 116.3 190 42.6
MBI15_g18235_MAGBIO Magnolia biondii HOM05D004986 ORTHO05D005898 1.5e-18 98.2 116 50.0
MD02G1112600 Malus domestica HOM05D004986 ORTHO05D005898 1.5e-18 98.2 142 39.4
Zm00001eb338840 Zea mays HOM05D004986 ORTHO05D005898 2.6e-18 97.4 65 70.8
Zm00001eb355160 Zea mays HOM05D004986 ORTHO05D005898 4.5e-18 96.7 89 56.2
CARHR281800 Cardamine hirsuta HOM05D004986 ORTHO05D005898 5.6e-13 79.7 50 76.0
MD02G1112300 Malus domestica HOM05D004986 ORTHO05D005898 2.8e-12 77.4 82 48.8
arahy.Tifrunner.gnm1.ann1.06FJIN Arachis hypogaea HOM05D004986 ORTHO05D005898 8.1e-12 75.9 62 66.1
arahy.Tifrunner.gnm1.ann1.757MF4 Arachis hypogaea HOM05D004986 ORTHO05D005898 8.1e-12 75.9 62 66.1
arahy.Tifrunner.gnm1.ann1.864E1P Arachis hypogaea HOM05D004986 ORTHO05D005898 8.1e-12 75.9 114 47.4
arahy.Tifrunner.gnm1.ann1.GJAM3K Arachis hypogaea HOM05D004986 ORTHO05D005898 8.1e-12 75.9 114 47.4
CDE04G2304 Ceratophyllum demersum HOM05D004986 ORTHO05D005898 2.4e-11 74.3 167 36.5


User provided reference genes

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