Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000493g0010 Nicotiana tabacum HOM05D008022 ORTHO05D010147 3.1e-40 169.1 181 100.0
Potri.005G234601 Populus trichocarpa HOM05D008022 ORTHO05D010147 1.9e-21 106.7 48 87.5
CSS0048901 Camellia sinensis var. sinensis HOM05D008022 ORTHO05D010147 3.3e-21 105.9 48 85.4
Atru.chr13.362 Acer truncatum HOM05D008022 ORTHO05D010147 5.6e-21 105.1 48 85.4
MD15G1017600 Malus domestica HOM05D008022 ORTHO05D010147 9.5e-21 104.4 50 82.0
CsaV3_7G006070 Cucumis sativus L. HOM05D008022 ORTHO05D010147 1.2e-20 104.0 49 81.6
Gohir.A05G188500 Gossypium hirsutum HOM05D008022 ORTHO05D010147 1.6e-20 103.6 48 83.3
Gohir.D05G191600 Gossypium hirsutum HOM05D008022 ORTHO05D010147 1.6e-20 103.6 48 83.3
Psat6g005360 Pisum sativum HOM05D008022 ORTHO05D010147 1.6e-20 103.6 49 79.6
CiPaw.08G062600 Carya illinoinensis HOM05D008022 ORTHO05D010147 4.7e-20 102.1 47 83.0
Phvul.001G009600 Phaseolus vulgaris HOM05D008022 ORTHO05D010147 4.7e-20 102.1 48 79.2
Glyma.14G216600 Glycine max HOM05D008022 ORTHO05D010147 6.2e-20 101.7 47 80.9
Medtr1g023270 Medicago truncatula HOM05D008022 ORTHO05D010147 6.2e-20 101.7 48 79.2
Medtr3g113080 Medicago truncatula HOM05D008022 ORTHO05D010147 8.1e-20 101.3 47 83.0
Cfa013902 Carpinus fangiana HOM05D002906 ORTHO05D003211 1.1e-19 100.9 49 81.6
Glyma.17G255200 Glycine max HOM05D008022 ORTHO05D010147 1.1e-19 100.9 47 78.7
Gorai.009G196900 Gossypium raimondii HOM05D008022 ORTHO05D010147 1.1e-19 100.9 48 81.2
Sed0002960 Sechium edule HOM05D008022 ORTHO05D010147 1.1e-19 100.9 47 80.9
TPR.G40293 Trifolium pratense HOM05D008022 ORTHO05D010147 1.1e-19 100.9 45 86.7
Cc10_g02120 Coffea canephora HOM05D008022 ORTHO05D010147 1.8e-19 100.1 47 85.1
Eucgr.F01845 Eucalyptus grandis HOM05D008022 ORTHO05D010147 1.8e-19 100.1 48 81.2
Lj5g0000972 Lotus japonicus HOM05D008022 ORTHO05D010147 2.3e-19 99.8 48 79.2
CiPaw.07G154400 Carya illinoinensis HOM05D008022 ORTHO05D010147 4.0e-19 99.0 43 88.4
Lalb_Chr08g0246011 Lupinus albus HOM05D008022 ORTHO05D010147 1.5e-18 97.1 46 80.4
Manes.05G152650 Manihot esculenta HOM05D008022 ORTHO05D010147 1.5e-18 97.1 49 77.6
Lj1g0009874 Lotus japonicus HOM05D008022 ORTHO05D010147 2.0e-18 96.7 46 78.3
CANSAT25G1466 Cannabis sativa HOM05D008022 ORTHO05D010147 3.4e-18 95.9 45 82.2
PGR031G0261 Punica granatum HOM05D008022 ORTHO05D010147 4.4e-18 95.5 46 76.1
TWI12G0111 Tripterygium wilfordii HOM05D008022 ORTHO05D010147 5.8e-18 95.1 46 76.1
arahy.Tifrunner.gnm1.ann1.QUSF5W Arachis hypogaea HOM05D008022 ORTHO05D010147 7.5e-18 94.7 48 77.1
ECA236G3926 Erigeron canadensis HOM05D008022 ORTHO05D010147 7.5e-18 94.7 45 82.2
FvH4_2g39010 Fragaria vesca HOM05D008022 ORTHO05D010147 9.9e-18 94.4 45 82.2
Duzib041G0305 Durio zibethinus HOM05D008022 ORTHO05D010147 1.3e-17 94.0 40 92.5
Lalb_Chr22g0354471 Lupinus albus HOM05D008022 ORTHO05D010147 1.7e-17 93.6 43 83.7
EL10Ac1g00558 Beta vulgaris HOM05D008022 ORTHO05D010147 2.9e-17 92.8 45 77.8
arahy.Tifrunner.gnm1.ann1.RV6KDM Arachis hypogaea HOM05D008022 ORTHO05D010147 3.7e-17 92.4 48 70.8
Cpa.g.sc140.17 Carica papaya HOM05D008022 ORTHO05D010147 4.9e-17 92.0 44 75.0
MELO3C018685.2 Cucumis melo HOM05D008022 ORTHO05D010147 4.1e-16 89.0 48 72.9
Lsat_1_v5_gn_7_91921 Lactuca sativa HOM05D008022 ORTHO05D010147 1.2e-15 87.4 46 73.9
Nn5g29204 Nelumbo nucifera HOM05D008022 ORTHO05D010147 2.1e-15 86.7 47 72.3
arahy.Tifrunner.gnm1.ann1.0AGT2R Arachis hypogaea HOM05D008022 ORTHO05D010147 2.7e-15 86.3 45 71.1
VMungo1309G0619 Vigna mungo HOM05D002906 ORTHO05D003211 4.6e-15 85.5 46 65.2
PSO541G2481 Papaver somniferum HOM05D008022 ORTHO05D010147 2.3e-14 83.2 45 73.3
Aqoxy6G02393 Aquilegia oxysepala HOM05D008022 ORTHO05D010147 7.3e-13 78.2 45 66.7
Prupe.1G370900 Prunus persica HOM05D008022 ORTHO05D010147 7.3e-13 78.2 47 68.1
FAN27G1447 Fragaria x ananassa HOM05D008022 ORTHO05D010147 1.2e-12 77.4 34 85.3
A02p20010 Brassica napus HOM05D008022 ORTHO05D010147 2.4e-11 73.2 40 65.0
C02p34060 Brassica napus HOM05D008022 ORTHO05D010147 2.4e-11 73.2 40 65.0
BolC2t09304H Brassica oleracea HOM05D008022 ORTHO05D010147 2.4e-11 73.2 40 65.0
BraA02t07039Z Brassica rapa HOM05D008022 ORTHO05D010147 2.4e-11 73.2 40 65.0
unitig_8.g4921 Utricularia gibba HOM05D008022 ORTHO05D010147 3.1e-11 72.8 49 57.1
AL2G35530 Arabidopsis lyrata HOM05D008022 ORTHO05D010147 5.2e-11 72.0 40 62.5
BcaB05g24920 Brassica carinata HOM05D008022 ORTHO05D010147 6.8e-11 71.6 40 65.0
HPP92_017807 Vanilla planifolia HOM05D008022 ORTHO05D010147 6.8e-11 71.6 42 59.5
BraA07t31648Z Brassica rapa HOM05D008022 ORTHO05D010147 8.9e-11 71.2 40 62.5
BcaC08g47037 Brassica carinata HOM05D008022 ORTHO05D010147 1.5e-10 70.5 40 62.5
BcaC08g47337 Brassica carinata HOM05D008022 ORTHO05D010147 1.5e-10 70.5 40 62.5
BcaC08g47338 Brassica carinata HOM05D008022 ORTHO05D010147 1.5e-10 70.5 40 62.5
C06p49540 Brassica napus HOM05D008022 ORTHO05D010147 1.5e-10 70.5 40 62.5
BolC6t39993H Brassica oleracea HOM05D008022 ORTHO05D010147 1.5e-10 70.5 40 62.5
CARHR068950 Cardamine hirsuta HOM05D008022 ORTHO05D010147 2.0e-10 70.1 40 62.5
BcaC08g45567 Brassica carinata HOM05D008022 ORTHO05D010147 4.4e-10 68.9 40 65.0
C06p32520 Brassica napus HOM05D008022 ORTHO05D010147 4.4e-10 68.9 40 65.0
BolC6t38374H Brassica oleracea HOM05D008022 ORTHO05D010147 4.4e-10 68.9 40 65.0
Carub.0002s2241 Capsella rubella HOM05D008022 ORTHO05D010147 4.4e-10 68.9 40 60.0
A07p41120 Brassica napus HOM05D008022 ORTHO05D010147 7.6e-10 68.2 40 60.0
DCAR_017590 Daucus carota HOM05D000043 ORTHO05D000223 1.7e-09 67.0 39 66.7
BraA07t30517Z Brassica rapa HOM05D008022 ORTHO05D010147 6.4e-09 65.1 40 60.0
CDE02G3345 Ceratophyllum demersum HOM05D008022 ORTHO05D010147 5.4e-08 62.0 42 52.4
Aqoxy5G01499 Aquilegia oxysepala HOM05D008022 ORTHO05D010147 1.7e-06 57.0 32 68.8


User provided reference genes

Program Settings