Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000482g0190 Nicotiana tabacum HOM05D005063 ORTHO05D010498 3.3e-109 398.3 186 100.0
Nitab4.5_0002279g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.2e-81 305.8 228 68.9
Nitab4.5_0000477g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 5.1e-78 294.7 201 74.1
Nitab4.5_0006617g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000137 7.4e-77 290.8 211 71.6
Nitab4.5_0013596g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.0e-75 285.0 203 70.0
Nitab4.5_0001530g0100 Nicotiana tabacum HOM05D005063 ORTHO05D010498 3.4e-74 282.0 185 76.8
Nitab4.5_0000730g0150 Nicotiana tabacum HOM05D005063 ORTHO05D010498 8.4e-73 277.3 189 74.1
Nitab4.5_0005016g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.6e-71 273.1 194 70.6
Nitab4.5_0019527g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.5e-69 266.5 233 60.1
Nitab4.5_0000036g0370 Nicotiana tabacum HOM05D005063 ORTHO05D010498 1.0e-65 253.8 205 66.3
Nitab4.5_0001173g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 8.5e-65 250.8 214 63.1
Nitab4.5_0000924g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.2e-64 248.4 201 65.7
Nitab4.5_0000044g0080 Nicotiana tabacum HOM05D005063 ORTHO05D000137 2.7e-63 245.7 187 68.4
Nitab4.5_0011961g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.0e-62 243.8 190 66.3
Nitab4.5_0012202g0030 Nicotiana tabacum HOM05D005063 ORTHO05D010498 5.9e-58 228.0 204 59.8
Nitab4.5_0000786g0250 Nicotiana tabacum HOM05D005063 ORTHO05D010498 1.2e-55 220.3 186 63.4
Nitab4.5_0000571g0200 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.6e-55 219.9 278 46.8
Nitab4.5_0003887g0060 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.7e-55 218.4 193 60.6
Nitab4.5_0000522g0050 Nicotiana tabacum HOM05D005063 ORTHO05D016873 5.1e-54 214.9 209 56.5
Nitab4.5_0002951g0080 Nicotiana tabacum HOM05D005063 ORTHO05D010498 9.7e-53 210.7 194 59.8
Nitab4.5_0013676g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.4e-51 206.1 184 60.3
Nitab4.5_0000829g0120 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.6e-50 202.6 169 65.7
Nitab4.5_0004899g0070 Nicotiana tabacum HOM05D005063 ORTHO05D000137 9.4e-48 194.1 177 58.2
Nitab4.5_0000697g0240 Nicotiana tabacum HOM05D005063 ORTHO05D010498 4.7e-47 191.8 115 81.7
Nitab4.5_0001810g0070 Nicotiana tabacum HOM05D005063 ORTHO05D010498 6.7e-46 188.0 185 54.6
Nitab4.5_0001927g0120 Nicotiana tabacum HOM05D005063 ORTHO05D010498 3.3e-45 185.7 168 59.5
Nitab4.5_0000228g0040 Nicotiana tabacum HOM05D005063 ORTHO05D010498 5.7e-45 184.9 188 56.4
Nitab4.5_0001308g0080 Nicotiana tabacum HOM05D005063 ORTHO05D010498 4.1e-43 178.7 112 81.2
Nitab4.5_0000498g0110 Nicotiana tabacum HOM05D005063 ORTHO05D010498 5.0e-41 171.8 113 77.0
Nitab4.5_0001863g0140 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.6e-39 165.6 149 56.4
Nitab4.5_0003911g0050 Nicotiana tabacum HOM05D005063 ORTHO05D010498 1.4e-38 163.7 152 59.2
Nitab4.5_0000021g0970 Nicotiana tabacum HOM05D005063 ORTHO05D010498 4.0e-38 162.2 123 66.7
Nitab4.5_0002297g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.2e-37 160.6 182 50.0
Nitab4.5_0000890g0200 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.8e-36 156.0 155 55.5
Nitab4.5_0004118g0030 Nicotiana tabacum HOM05D005063 ORTHO05D010498 4.8e-36 155.2 100 79.0
Nitab4.5_0014828g0010 Nicotiana tabacum HOM05D005063 ORTHO05D010498 3.1e-35 152.5 171 52.0
Nitab4.5_0003079g0080 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.6e-34 150.2 99 74.7
Nitab4.5_0007137g0060 Nicotiana tabacum HOM05D005063 ORTHO05D010498 3.5e-34 149.1 81 84.0
Nitab4.5_0000584g0060 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.0e-33 147.5 99 73.7
Nitab4.5_0002786g0050 Nicotiana tabacum HOM05D005063 ORTHO05D010498 2.9e-33 146.0 99 75.8
Nitab4.5_0000377g0060 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.8e-33 145.6 73 94.5
Nitab4.5_0000008g0770 Nicotiana tabacum HOM05D005063 ORTHO05D010498 7.2e-32 141.4 186 41.9
Nitab4.5_0004196g0050 Nicotiana tabacum HOM05D005063 ORTHO05D010498 8.0e-31 137.9 77 79.2
Nitab4.5_0012299g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 8.0e-31 137.9 107 66.4
Nitab4.5_0000477g0180 Nicotiana tabacum HOM05D005063 ORTHO05D000137 2.6e-29 132.9 73 80.8
Nitab4.5_0001552g0110 Nicotiana tabacum HOM05D005063 ORTHO05D010498 1.7e-28 130.2 74 85.1
Nitab4.5_0003079g0100 Nicotiana tabacum HOM05D005063 ORTHO05D010498 1.7e-28 130.2 71 83.1
Nitab4.5_0011631g0010 Nicotiana tabacum HOM05D005063 ORTHO05D010498 1.4e-27 127.1 119 57.1
Nitab4.5_0000021g0950 Nicotiana tabacum HOM05D005063 ORTHO05D010498 5.9e-26 121.7 66 89.4
Nitab4.5_0000246g0050 Nicotiana tabacum HOM05D005063 ORTHO05D010498 1.0e-25 120.9 186 42.5
Nitab4.5_0006698g0050 Nicotiana tabacum HOM05D005063 ORTHO05D010498 2.9e-25 119.4 74 75.7
Nitab4.5_0000102g0290 Nicotiana tabacum HOM05D005063 ORTHO05D010498 5.5e-24 115.2 107 57.0
Nitab4.5_0001308g0100 Nicotiana tabacum HOM05D005063 ORTHO05D010498 2.3e-22 109.8 71 70.4
Nitab4.5_0002926g0060 Nicotiana tabacum HOM05D005063 ORTHO05D010498 5.2e-22 108.6 60 83.3
Nitab4.5_0002944g0060 Nicotiana tabacum HOM05D005063 ORTHO05D010498 2.2e-20 103.2 60 81.7
Nitab4.5_0006001g0030 Nicotiana tabacum HOM05D005063 ORTHO05D010498 8.3e-20 101.3 58 84.5
Nitab4.5_0007360g0060 Nicotiana tabacum HOM05D005063 ORTHO05D010498 1.4e-19 100.5 67 74.6
CAN.G755.5 Capsicum annuum HOM05D000022 ORTHO05D000137 9.2e-19 97.8 210 32.9
CAN.G77.20 Capsicum annuum HOM05D005063 ORTHO05D000137 2.9e-17 92.8 193 30.1
Nitab4.5_0004192g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.1e-16 90.9 196 29.6
Nitab4.5_0002661g0070 Nicotiana tabacum HOM05D005063 ORTHO05D010498 2.5e-16 89.7 45 93.3
Nitab4.5_0002098g0050 Nicotiana tabacum HOM05D005063 ORTHO05D010498 6.1e-15 85.1 58 74.1
Nitab4.5_0002806g0010 Nicotiana tabacum HOM05D005063 ORTHO05D005463 8.0e-15 84.7 58 72.4
Nitab4.5_0003911g0060 Nicotiana tabacum HOM05D005063 ORTHO05D010498 4.0e-14 82.4 49 75.5
Nitab4.5_0009150g0060 Nicotiana tabacum HOM05D006812 ORTHO05D000137 8.9e-14 81.3 210 28.1
Nitab4.5_0001896g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.5e-13 80.5 48 85.4
CAN.G1344.11 Capsicum annuum HOM05D000679 ORTHO05D000482 2.6e-13 79.7 93 39.8
Nitab4.5_0008534g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 5.8e-13 78.6 56 69.6
Nitab4.5_0000584g0100 Nicotiana tabacum HOM05D005063 ORTHO05D010498 9.8e-13 77.8 58 65.5
Nitab4.5_0014346g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 9.8e-13 77.8 183 23.5
Nitab4.5_0004809g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.3e-12 77.4 100 39.0
Nitab4.5_0000114g0050 Nicotiana tabacum HOM05D008108 ORTHO05D000137 1.7e-12 77.0 129 30.2
Nitab4.5_0004118g0070 Nicotiana tabacum HOM05D005063 ORTHO05D000137 1.7e-12 77.0 45 80.0
Nitab4.5_0011140g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.7e-12 77.0 100 38.0
Nitab4.5_0000026g0260 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.4e-11 73.9 183 24.0
CAN.G1862.3 Capsicum annuum HOM05D000361 ORTHO05D000137 4.1e-11 72.4 114 36.8
Nitab4.5_0003250g0060 Nicotiana tabacum HOM05D000455 ORTHO05D000434 7.0e-11 71.6 217 23.0
Nitab4.5_0002072g0090 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.5e-10 69.3 47 76.6
Nitab4.5_0008736g0030 Nicotiana tabacum HOM05D034517 ORTHO05D010498 1.3e-09 67.4 55 54.5
Nitab4.5_0000904g0100 Nicotiana tabacum HOM05D006812 ORTHO05D000137 2.3e-09 66.6 132 30.3
Nitab4.5_0001725g0060 Nicotiana tabacum HOM05D006812 ORTHO05D000137 2.3e-09 66.6 93 36.6
CANSAT01G0053 Cannabis sativa HOM05D008636 ORTHO05D000137 3.9e-09 65.9 76 40.8
CANSAT21G0896 Cannabis sativa HOM05D008636 ORTHO05D000137 3.9e-09 65.9 76 40.8
CANSAT11G0656 Cannabis sativa HOM05D008636 ORTHO05D000137 5.0e-09 65.5 76 39.5
CANSAT25G0186 Cannabis sativa HOM05D008636 ORTHO05D000137 5.0e-09 65.5 76 39.5
CANSAT35G0235 Cannabis sativa HOM05D008636 ORTHO05D000137 5.0e-09 65.5 76 39.5
Nitab4.5_0003134g0170 Nicotiana tabacum HOM05D008108 ORTHO05D011004 6.6e-09 65.1 116 27.6
CANSAT01G0402 Cannabis sativa HOM05D008636 ORTHO05D000137 8.6e-09 64.7 76 39.5
CANSAT25G3447 Cannabis sativa HOM05D008636 ORTHO05D000137 8.6e-09 64.7 76 39.5
CANSAT35G0233 Cannabis sativa HOM05D008636 ORTHO05D000137 8.6e-09 64.7 76 39.5
CANSAT35G1851 Cannabis sativa HOM05D008636 ORTHO05D000137 8.6e-09 64.7 76 39.5
CANSAT56G1525 Cannabis sativa HOM05D008636 ORTHO05D000137 8.6e-09 64.7 76 39.5
Nitab4.5_0018223g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 8.6e-09 64.7 90 32.2
Nitab4.5_0016899g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.1e-08 64.3 93 32.3
Nitab4.5_0000569g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000137 1.5e-08 63.9 233 22.3
Nitab4.5_0011972g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 1.9e-08 63.5 100 31.0
PGSC0003DMG400044863 Solanum tuberosum HOM05D000679 ORTHO05D000137 1.9e-08 63.5 96 33.3
Nitab4.5_0003408g0060 Nicotiana tabacum HOM05D005063 ORTHO05D010498 2.5e-08 63.2 47 70.2
CANSAT35G0046 Cannabis sativa HOM05D000679 ORTHO05D000137 3.3e-08 62.8 76 36.8
Nitab4.5_0003261g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000137 4.3e-08 62.4 88 33.0
CANSAT54G1268 Cannabis sativa HOM05D008897 ORTHO05D000137 9.5e-08 61.2 78 32.1
Nitab4.5_0007137g0030 Nicotiana tabacum HOM05D005063 ORTHO05D010498 9.5e-08 61.2 29 96.6
CANSAT21G0642 Cannabis sativa HOM05D008721 ORTHO05D000137 1.6e-07 60.5 76 36.8
ATR0441G001 Amborella trichopoda HOM05D008721 ORTHO05D000137 2.8e-07 59.7 76 35.5
CANSAT25G0487 Cannabis sativa HOM05D008721 ORTHO05D000137 2.8e-07 59.7 76 35.5
CANSAT54G1761 Cannabis sativa HOM05D008721 ORTHO05D000137 2.8e-07 59.7 76 35.5
CANSAT80G1051 Cannabis sativa HOM05D008721 ORTHO05D000137 2.8e-07 59.7 76 35.5
Nitab4.5_0000553g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 3.6e-07 59.3 100 29.0
CAN.G341.4 Capsicum annuum HOM05D005877 ORTHO05D000137 4.7e-07 58.9 57 43.9
Nitab4.5_0002347g0070 Nicotiana tabacum HOM05D008108 ORTHO05D000137 6.2e-07 58.5 103 30.1
Nitab4.5_0000500g0070 Nicotiana tabacum HOM05D008108 ORTHO05D000137 1.1e-06 57.8 72 33.3
Nitab4.5_0000434g0030 Nicotiana tabacum HOM05D008108 ORTHO05D000137 1.4e-06 57.4 162 24.7
Nitab4.5_0005997g0040 Nicotiana tabacum HOM05D008108 ORTHO05D000137 1.4e-06 57.4 67 32.8
PGSC0003DMG400028017 Solanum tuberosum HOM05D007732 ORTHO05D010105 1.4e-06 57.4 97 33.0
Sopen12g009250 Solanum pennellii HOM05D000541 ORTHO05D000137 1.8e-06 57.0 170 24.7
Nitab4.5_0001024g0030 Nicotiana tabacum HOM05D008108 ORTHO05D011004 2.3e-06 56.6 70 32.9
Nitab4.5_0004407g0050 Nicotiana tabacum HOM05D008108 ORTHO05D000137 2.3e-06 56.6 70 34.3
Nitab4.5_0002311g0170 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.1e-06 56.2 85 29.4
Nitab4.5_0010898g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 3.1e-06 56.2 100 29.0
CANSAT78G2189 Cannabis sativa HOM05D000679 ORTHO05D000137 4.0e-06 55.8 81 33.3
Nitab4.5_0000762g0080 Nicotiana tabacum HOM05D006812 ORTHO05D000137 4.0e-06 55.8 99 36.4
Nitab4.5_0001114g0080 Nicotiana tabacum HOM05D002262 ORTHO05D000137 4.0e-06 55.8 76 32.9
CANSAT25G3227 Cannabis sativa HOM05D008721 ORTHO05D000137 5.2e-06 55.5 76 32.9
Nitab4.5_0000638g0060 Nicotiana tabacum HOM05D006812 ORTHO05D000482 5.2e-06 55.5 49 49.0
Nitab4.5_0000001g0300 Nicotiana tabacum HOM05D008108 ORTHO05D000137 6.8e-06 55.1 97 29.9
Nitab4.5_0000440g0110 Nicotiana tabacum HOM05D000679 ORTHO05D000137 6.8e-06 55.1 82 35.4
Nitab4.5_0000867g0060 Nicotiana tabacum HOM05D006812 ORTHO05D000137 8.9e-06 54.7 124 27.4
PGSC0003DMG400009651 Solanum tuberosum HOM05D002262 ORTHO05D000482 8.9e-06 54.7 180 23.9


User provided reference genes

Program Settings