Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000482g0070 Nicotiana tabacum HOM05D002897 ORTHO05D008718 1.3e-135 486.5 254 100.0
Nitab4.5_0012091g0010 Nicotiana tabacum HOM05D002897 ORTHO05D008718 1.5e-125 453.0 254 94.1
PGSC0003DMG400000696 Solanum tuberosum HOM05D002897 ORTHO05D008718 5.0e-108 394.8 259 82.2
Peaxi162Scf00921g00023 Petunia axillaris HOM05D002897 ORTHO05D008718 3.2e-107 392.1 258 81.4
Solyc07g049200.4 Solanum lycopersicum HOM05D002897 ORTHO05D008718 1.6e-106 389.8 259 81.5
Sopen07g025210 Solanum pennellii HOM05D002897 ORTHO05D008718 2.7e-106 389.0 255 81.6
Duzib138G1172 Durio zibethinus HOM05D002897 ORTHO05D008718 4.8e-87 325.1 251 68.9
CSS0022002 Camellia sinensis var. sinensis HOM05D002897 ORTHO05D008718 1.6e-85 320.1 255 67.5
TAR624G0001 Trochodendron aralioides HOM05D002897 ORTHO05D008718 7.7e-85 317.8 257 67.3
Thecc.01G180000 Theobroma cacao HOM05D002897 ORTHO05D008718 1.3e-84 317.0 253 66.4
Actinidia09731 Actinidia chinensis HOM05D002897 ORTHO05D008718 1.7e-84 316.6 255 66.3
SalBow1G3579 Salvia bowleyana HOM05D002897 ORTHO05D008718 2.2e-84 316.2 262 66.8
Manes.13G067750 Manihot esculenta HOM05D002897 ORTHO05D008718 2.9e-84 315.8 255 65.9
Rhsim06G0166000 Rhododendron simsii HOM05D002897 ORTHO05D008718 2.9e-84 315.8 263 66.2
Manes.13G067751 Manihot esculenta HOM05D002897 ORTHO05D008718 2.5e-83 312.8 255 65.1
SalBow1G2496 Salvia bowleyana HOM05D002897 ORTHO05D008718 4.2e-83 312.0 262 65.6
Dinv39736 Davidia involucrata HOM05D002897 ORTHO05D008718 9.4e-83 310.8 264 66.3
Cpa.g.sc132.3 Carica papaya HOM05D002897 ORTHO05D008718 1.2e-82 310.5 256 64.5
Hma1.2p1_2044F.1_g312350 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 1.6e-82 310.1 260 64.2
vmacro12177 Vaccinium macrocarpon HOM05D002897 ORTHO05D008718 1.6e-82 310.1 253 66.0
Potri.014G156700 Populus trichocarpa HOM05D002897 ORTHO05D008718 3.6e-82 308.9 261 64.4
Gohir.A11G153700 Gossypium hirsutum HOM05D002897 ORTHO05D008718 1.5e-80 303.5 253 63.6
Nn1g07262 Nelumbo nucifera HOM05D002897 ORTHO05D008718 2.0e-80 303.1 257 63.4
Sabra14G0118500 Salix brachista HOM05D002897 ORTHO05D008718 2.0e-80 303.1 260 65.0
Sc06g0009610 Simmondsia chinensis HOM05D002897 ORTHO05D008718 2.0e-80 303.1 260 62.7
Gorai.007G171100 Gossypium raimondii HOM05D002897 ORTHO05D008718 2.6e-80 302.8 253 63.6
MSTRG.14141 Avicennia marina HOM05D002897 ORTHO05D008718 3.3e-80 302.4 258 64.3
CiPaw.03G157200 Carya illinoinensis HOM05D002897 ORTHO05D008718 4.4e-80 302.0 261 61.3
Cc05_g03270 Coffea canephora HOM05D002897 ORTHO05D008718 4.4e-80 302.0 254 63.0
Gohir.D11G160500 Gossypium hirsutum HOM05D002897 ORTHO05D008718 7.5e-80 301.2 253 63.2
ECA234G1553 Erigeron canadensis HOM05D002897 ORTHO05D008718 2.2e-79 299.7 256 62.5
Ciclev10016301m.g Citrus clementina HOM05D002897 ORTHO05D008718 3.7e-79 298.9 265 62.6
AUR62035641 Chenopodium quinoa HOM05D002897 ORTHO05D008718 4.8e-79 298.5 256 61.7
Oeu051891.2 Olea europaea HOM05D002897 ORTHO05D008718 4.8e-79 298.5 284 60.6
TWI18G1283 Tripterygium wilfordii HOM05D002897 ORTHO05D008718 4.8e-79 298.5 260 63.1
GSVIVG01030483001 Vitis vinifera HOM05D002897 ORTHO05D008718 1.4e-78 297.0 255 61.2
Cfa014332 Carpinus fangiana HOM05D002897 ORTHO05D008718 1.8e-78 296.6 260 63.5
Atru.chr6.3235 Acer truncatum HOM05D002897 ORTHO05D008718 2.4e-78 296.2 258 60.5
HanXRQChr12g0373611 Helianthus annuus HOM05D002897 ORTHO05D008718 4.1e-78 295.4 257 62.3
Lj8C128G4 Lonicera japonica HOM05D002897 ORTHO05D008718 2.7e-77 292.7 256 64.1
Prupe.3G212700 Prunus persica HOM05D002897 ORTHO05D008718 4.5e-77 292.0 262 60.3
Lsat_1_v5_gn_5_123640 Lactuca sativa HOM05D002897 ORTHO05D008718 7.7e-77 291.2 261 59.8
Phvul.008G211400 Phaseolus vulgaris HOM05D002897 ORTHO05D008718 1.0e-76 290.8 258 62.4
FAN05G4893 Fragaria x ananassa HOM05D002897 ORTHO05D008718 6.5e-76 288.1 255 61.6
THA.LOC104826141 Tarenaya hassleriana HOM05D002897 ORTHO05D008718 6.5e-76 288.1 262 63.4
RcHm_v2.0_Chr2g0158471 Rosa chinensis HOM05D002897 ORTHO05D008718 8.5e-76 287.7 254 59.8
AT1G05060 Arabidopsis thaliana HOM05D002897 ORTHO05D008718 1.1e-75 287.3 258 62.0
Sed0013072 Sechium edule HOM05D002897 ORTHO05D008718 2.5e-75 286.2 253 57.7
FAN02G2770 Fragaria x ananassa HOM05D002897 ORTHO05D008718 3.2e-75 285.8 255 60.8
Sp1g03930 Schrenkiella parvula HOM05D002897 ORTHO05D008718 3.2e-75 285.8 256 60.9
FvH4_6g42620 Fragaria vesca HOM05D002897 ORTHO05D008718 5.5e-75 285.0 255 60.8
Carub.0001s0433 Capsella rubella HOM05D002897 ORTHO05D008718 7.2e-75 284.6 257 60.7
MELO3C018838.2 Cucumis melo HOM05D002897 ORTHO05D008718 7.2e-75 284.6 260 57.7
Migut.H01234 Erythranthe guttata HOM05D002897 ORTHO05D008718 7.2e-75 284.6 268 58.6
Aqoxy1G03476 Aquilegia oxysepala HOM05D002897 ORTHO05D008718 9.4e-75 284.3 260 60.8
AL1G14810 Arabidopsis lyrata HOM05D002897 ORTHO05D008718 9.4e-75 284.3 258 61.2
ClCG02G002140 Citrullus lanatus HOM05D002897 ORTHO05D008718 9.4e-75 284.3 261 57.5
VMungo0647G1784 Vigna mungo HOM05D002897 ORTHO05D008718 2.1e-74 283.1 256 62.9
Thhalv10008572m.g Eutrema salsugineum HOM05D002897 ORTHO05D008718 2.7e-74 282.7 256 59.8
Haze_12787 Corylus avellana HOM05D002897 ORTHO05D008718 3.6e-74 282.3 280 57.9
Medtr5g085980 Medicago truncatula HOM05D002897 ORTHO05D008718 4.7e-74 282.0 256 58.6
BcaB07g32946 Brassica carinata HOM05D002897 ORTHO05D008718 6.1e-74 281.6 256 59.4
Glyma.02G270500 Glycine max HOM05D002897 ORTHO05D008718 1.0e-73 280.8 256 60.2
SGA_v2.0_scaffold49G18345 Striga asiatica HOM05D002897 ORTHO05D008718 1.8e-73 280.0 261 59.8
CsaV3_7G003360 Cucumis sativus L. HOM05D002897 ORTHO05D008718 3.0e-73 279.3 261 56.3
QL08p031170 Quercus lobata HOM05D002897 ORTHO05D008718 5.2e-73 278.5 260 58.5
TPR.G14446 Trifolium pratense HOM05D002897 ORTHO05D008718 6.8e-73 278.1 257 59.9
AUR62017163 Chenopodium quinoa HOM05D002897 ORTHO05D008718 1.2e-72 277.3 246 58.9
Glyma.14G046500 Glycine max HOM05D002897 ORTHO05D008718 1.2e-72 277.3 255 60.8
BraA09t38920Z Brassica rapa HOM05D002897 ORTHO05D008718 3.4e-72 275.8 255 57.6
Hma1.2p1_1986F.1_g310090 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 3.4e-72 275.8 210 67.6
arahy.Tifrunner.gnm1.ann1.QRVI7E Arachis hypogaea HOM05D002897 ORTHO05D008718 4.4e-72 275.4 268 57.5
BolC5t31920H Brassica oleracea HOM05D002897 ORTHO05D008718 7.5e-72 274.6 256 57.0
BcaC05g27288 Brassica carinata HOM05D002897 ORTHO05D008718 9.8e-72 274.2 256 57.4
Ca_06120_v3 Cicer arietinum L. HOM05D002897 ORTHO05D008718 1.3e-71 273.9 255 58.0
Eucgr.A01101 Eucalyptus grandis HOM05D002897 ORTHO05D008718 1.3e-71 273.9 266 55.3
Psat4g114440 Pisum sativum HOM05D002897 ORTHO05D008718 2.8e-71 272.7 255 57.3
EL10Ac4g07512 Beta vulgaris HOM05D002897 ORTHO05D008718 3.7e-71 272.3 265 55.5
arahy.Tifrunner.gnm1.ann1.YEZ88R Arachis hypogaea HOM05D002897 ORTHO05D008718 8.3e-71 271.2 268 56.7
Lalb_Chr04g0249891 Lupinus albus HOM05D002897 ORTHO05D008718 5.4e-70 268.5 258 56.6
A09p33710 Brassica napus HOM05D002897 ORTHO05D008718 5.0e-68 261.9 280 52.5
CARHR004510 Cardamine hirsuta HOM05D002897 ORTHO05D008718 8.5e-68 261.2 265 56.6
C05p31940 Brassica napus HOM05D002897 ORTHO05D008718 1.9e-67 260.0 281 52.0
LjContig00564g0002899 Lotus japonicus HOM05D002897 ORTHO05D008718 7.2e-67 258.1 260 55.8
Zm00001eb280010 Zea mays HOM05D002897 ORTHO05D008718 1.8e-65 253.4 255 56.5
Os06g0239700 Oryza sativa ssp. japonica HOM05D002897 ORTHO05D008718 5.2e-65 251.9 254 53.9
MBI19_g24999_MAGBIO Magnolia biondii HOM05D002897 ORTHO05D008718 4.4e-64 248.8 261 57.1
CDE07G0516 Ceratophyllum demersum HOM05D002897 ORTHO05D008718 3.1e-62 242.7 258 52.3
Aqoxy1G03469 Aquilegia oxysepala HOM05D002897 ORTHO05D008718 1.6e-61 240.4 266 54.1
PSO210G2604 Papaver somniferum HOM05D002897 ORTHO05D008718 5.9e-61 238.4 263 52.9
Aa31LG1G19710 Aethionema arabicum HOM05D002897 ORTHO05D008718 3.3e-59 232.6 305 45.6
Hma1.2p1_2044F.1_g312360 Hydrangea macrophylla HOM05D002897 ORTHO05D008718 5.6e-59 231.9 199 64.3
MD17G1102200 Malus domestica HOM05D002897 ORTHO05D008718 8.0e-58 228.0 213 60.1
DCAR_012931 Daucus carota HOM05D002897 ORTHO05D008718 2.2e-55 219.9 257 51.8
COL.COLO4_21853 Corchorus olitorius HOM05D002897 ORTHO05D008718 1.6e-50 203.8 156 68.6
unitig_21.g21003 Utricularia gibba HOM05D002897 ORTHO05D008718 4.0e-49 199.1 159 64.8
HPP92_017354 Vanilla planifolia HOM05D002897 ORTHO05D008718 6.8e-49 198.4 251 46.6
FAN14G2576 Fragaria x ananassa HOM05D002897 ORTHO05D008718 1.2e-48 197.6 256 50.0
SEGI_41028 Sequoiadendron giganteum HOM05D002897 ORTHO05D008718 3.1e-41 172.9 248 43.1
CSS0034853 Camellia sinensis var. sinensis HOM05D002897 ORTHO05D008718 1.0e-36 157.9 170 50.6
Pp3c23_20260 Physcomitrium patens HOM05D002897 ORTHO05D008718 9.9e-32 141.4 250 38.4
ATR0059G011 Amborella trichopoda HOM05D002897 ORTHO05D008718 7.8e-29 131.7 140 53.6
AagrBONN_evm.TU.Sc2ySwM_117.2821 Anthoceros agrestis HOM05D002897 ORTHO05D008718 1.7e-28 130.6 240 35.8
MD06G1049400 Malus domestica HOM05D002897 ORTHO05D008718 8.7e-20 101.7 126 48.4
ATR0059G040 Amborella trichopoda HOM05D002897 ORTHO05D008718 8.1e-18 95.1 92 52.2
CANSAT64G1786 Cannabis sativa HOM05D002897 ORTHO05D008718 8.4e-15 85.1 59 67.8
SMO290G0011 Selaginella moellendorffii HOM05D013342 ORTHO05D008718 4.6e-13 79.3 226 31.0
SMO356G0703 Selaginella moellendorffii HOM05D013342 ORTHO05D008718 1.3e-12 77.8 226 31.0
HPP92_017340 Vanilla planifolia HOM05D002897 ORTHO05D008718 1.3e-07 61.2 109 40.4
BolC6t39233H Brassica oleracea HOM05D002897 ORTHO05D008718 3.8e-07 59.7 44 61.4


User provided reference genes

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