Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000481g0130 Nicotiana tabacum HOM05D000995 ORTHO05D010997 2.4e-43 178.3 83 100.0
Nitab4.5_0001868g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.3e-35 150.6 82 85.4
Nitab4.5_0008368g0050 Nicotiana tabacum HOM05D003574 ORTHO05D001773 1.5e-34 149.1 82 84.1
Nitab4.5_0000199g0110 Nicotiana tabacum HOM05D000995 ORTHO05D010997 1.0e-33 146.4 82 82.9
Nitab4.5_0000032g0300 Nicotiana tabacum HOM05D000995 ORTHO05D010997 8.5e-33 143.3 82 81.7
Nitab4.5_0000621g0100 Nicotiana tabacum HOM05D003574 ORTHO05D010997 1.9e-32 142.1 82 80.5
Nitab4.5_0010291g0010 Nicotiana tabacum HOM05D000995 ORTHO05D000638 2.5e-32 141.7 82 80.5
Nitab4.5_0007010g0010 Nicotiana tabacum HOM05D003574 ORTHO05D010997 2.7e-31 138.3 80 76.2
PGSC0003DMG400009586 Solanum tuberosum HOM05D000995 ORTHO05D000638 2.4e-27 125.2 82 63.4
CAN.G322.132 Capsicum annuum HOM05D000995 ORTHO05D000638 4.2e-24 114.4 82 61.0
Nitab4.5_0007583g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-23 112.8 63 82.5
Nitab4.5_0000022g0410 Nicotiana tabacum HOM05D000995 ORTHO05D001773 1.0e-22 109.8 76 67.1
Nitab4.5_0004620g0050 Nicotiana tabacum HOM05D000995 ORTHO05D001773 1.8e-22 109.0 82 63.4
Sopen05g008570 Solanum pennellii HOM05D003574 ORTHO05D002175 1.1e-21 106.3 82 58.5
Solyc04g048905.1 Solanum lycopersicum HOM05D000995 ORTHO05D001773 2.0e-21 105.5 82 57.3
CAN.G229.21 Capsicum annuum HOM05D000310 ORTHO05D000509 2.8e-20 101.7 82 54.9
Nitab4.5_0004446g0030 Nicotiana tabacum HOM05D003574 ORTHO05D010997 3.7e-20 101.3 60 75.0
Nitab4.5_0001057g0110 Nicotiana tabacum HOM05D003574 ORTHO05D010997 4.1e-19 97.8 58 77.6
PGSC0003DMG400018974 Solanum tuberosum HOM05D000995 ORTHO05D001773 2.0e-18 95.5 81 55.6
Nitab4.5_0001179g0140 Nicotiana tabacum HOM05D003574 ORTHO05D000638 2.7e-18 95.1 82 59.8
PGSC0003DMG400001285 Solanum tuberosum HOM05D000995 ORTHO05D000638 1.0e-17 93.2 81 54.3
PGSC0003DMG400038482 Solanum tuberosum HOM05D000995 ORTHO05D000638 1.7e-17 92.4 81 53.1
PGSC0003DMG400040325 Solanum tuberosum HOM05D000995 ORTHO05D001773 3.8e-17 91.3 82 52.4
Nitab4.5_0002941g0030 Nicotiana tabacum HOM05D000995 ORTHO05D000638 6.5e-17 90.5 49 87.8
Nitab4.5_0000687g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.9e-16 89.0 72 58.3
PGSC0003DMG400013728 Solanum tuberosum HOM05D000995 ORTHO05D001773 2.5e-16 88.6 81 51.9
Hma1.2p1_0446F.1_g154720 Hydrangea macrophylla HOM05D000995 ORTHO05D000638 1.2e-15 86.3 79 46.8
Hma1.2p1_0120F.1_g057263 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 1.6e-15 85.9 79 46.8
Hma1.2p1_0663F.1_g198890 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 1.6e-15 85.9 79 46.8
Hma1.2p1_0494F.1_g165370 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 2.1e-15 85.5 79 46.8
Sopen12g023050 Solanum pennellii HOM05D003574 ORTHO05D002175 6.1e-15 84.0 74 51.4
Hma1.2p1_2783F.1_g328410 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 1.0e-14 83.2 79 48.1
CAN.G624.18 Capsicum annuum HOM05D000995 ORTHO05D000638 1.8e-14 82.4 70 57.1
MSTRG.26045 Avicennia marina HOM05D000995 ORTHO05D000638 2.3e-14 82.0 81 45.7
Hma1.2p1_1193F.1_g265550 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 2.3e-14 82.0 79 46.8
Nitab4.5_0000378g0120 Nicotiana tabacum HOM05D000995 ORTHO05D010997 6.8e-14 80.5 49 69.4
AUR62035177 Chenopodium quinoa HOM05D004781 ORTHO05D001773 1.5e-13 79.3 83 44.6
Nitab4.5_0002941g0050 Nicotiana tabacum HOM05D000995 ORTHO05D000638 9.8e-13 76.6 81 51.9
AUR62026535 Chenopodium quinoa HOM05D000995 ORTHO05D000638 3.7e-12 74.7 83 43.4
PGSC0003DMG400043966 Solanum tuberosum HOM05D000995 ORTHO05D001773 3.7e-12 74.7 45 68.9
AUR62013983 Chenopodium quinoa HOM05D004781 ORTHO05D001773 8.3e-12 73.6 82 43.9
Nitab4.5_0010513g0020 Nicotiana tabacum HOM05D000995 ORTHO05D001773 1.1e-11 73.2 41 87.8
Rhsim01G0099100 Rhododendron simsii HOM05D000995 ORTHO05D001773 1.4e-11 72.8 62 56.5
Rhsim01G0104900 Rhododendron simsii HOM05D000995 ORTHO05D001773 1.4e-11 72.8 62 56.5
Rhsim08G0106900 Rhododendron simsii HOM05D000995 ORTHO05D002620 1.4e-11 72.8 62 56.5
Rhsim13G0131600 Rhododendron simsii HOM05D000995 ORTHO05D002620 1.4e-11 72.8 62 56.5
Rhsim02G0098200 Rhododendron simsii HOM05D000995 ORTHO05D002620 1.8e-11 72.4 62 56.5
Rhsim01G0078000 Rhododendron simsii HOM05D000995 ORTHO05D001773 4.1e-11 71.2 62 54.8
Nitab4.5_0004998g0050 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.0e-11 70.5 40 80.0
EL10Ac9g22875 Beta vulgaris HOM05D004781 ORTHO05D001773 1.2e-10 69.7 83 42.2
MELO3C000787.2 Cucumis melo HOM05D000995 ORTHO05D001773 1.2e-10 69.7 81 39.5
EL10Ac1g00951 Beta vulgaris HOM05D000995 ORTHO05D001773 1.6e-10 69.3 83 42.2
EL10Ac2g03521 Beta vulgaris HOM05D004781 ORTHO05D001773 1.6e-10 69.3 83 42.2
EL10Ac3g06382 Beta vulgaris HOM05D004781 ORTHO05D001773 1.6e-10 69.3 83 42.2
EL10Ac6g13855 Beta vulgaris HOM05D004781 ORTHO05D001773 1.6e-10 69.3 83 42.2
EL10Ac6g14812 Beta vulgaris HOM05D004781 ORTHO05D001773 1.6e-10 69.3 83 42.2
QL11p006726 Quercus lobata HOM05D000995 ORTHO05D001773 1.6e-10 69.3 74 43.2
PGSC0003DMG400031332 Solanum tuberosum HOM05D000995 ORTHO05D001773 1.6e-10 69.3 54 59.3
ClCG11G010690 Citrullus lanatus HOM05D000995 ORTHO05D001773 2.0e-10 68.9 82 36.6
Nitab4.5_0000378g0130 Nicotiana tabacum HOM05D000995 ORTHO05D010997 2.0e-10 68.9 41 73.2
PGSC0003DMG400030152 Solanum tuberosum HOM05D000995 ORTHO05D001773 2.7e-10 68.6 58 53.4
ClCG01G009740 Citrullus lanatus HOM05D000995 ORTHO05D000638 3.5e-10 68.2 82 35.4
ClCG01G016350 Citrullus lanatus HOM05D000995 ORTHO05D001773 4.5e-10 67.8 82 36.6
MELO3C000457.2 Cucumis melo HOM05D000995 ORTHO05D000638 4.5e-10 67.8 81 39.5
PGSC0003DMG400020615 Solanum tuberosum HOM05D000995 ORTHO05D001773 4.5e-10 67.8 45 60.0
AUR62042503 Chenopodium quinoa HOM05D000995 ORTHO05D001773 5.9e-10 67.4 83 39.8
ClCG01G008830 Citrullus lanatus HOM05D000995 ORTHO05D000638 5.9e-10 67.4 82 36.6
ClCG08G000680 Citrullus lanatus HOM05D000995 ORTHO05D001773 5.9e-10 67.4 82 37.8
ClCG08G001070 Citrullus lanatus HOM05D000995 ORTHO05D001773 5.9e-10 67.4 82 35.4
MELO3C029552.2 Cucumis melo HOM05D000995 ORTHO05D000638 5.9e-10 67.4 81 38.3
ClCG07G007890 Citrullus lanatus HOM05D000995 ORTHO05D001773 7.7e-10 67.0 78 37.2
MELO3C027383.2 Cucumis melo HOM05D000995 ORTHO05D001773 7.7e-10 67.0 81 38.3
MELO3C000149.2 Cucumis melo HOM05D000995 ORTHO05D000638 1.0e-09 66.6 81 39.5
Nitab4.5_0001586g0190 Nicotiana tabacum HOM05D003574 ORTHO05D010997 1.0e-09 66.6 50 64.0
Hund30412 Selenicereus undatus HOM05D004781 ORTHO05D001773 1.0e-09 66.6 79 38.0
AUR62043693 Chenopodium quinoa HOM05D004781 ORTHO05D001773 1.3e-09 66.2 82 41.5
Nitab4.5_0002884g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-09 66.2 39 76.9
EL10Ac6g13965 Beta vulgaris HOM05D004781 ORTHO05D001773 1.7e-09 65.9 83 39.8
MELO3C026674.2 Cucumis melo HOM05D000995 ORTHO05D001773 1.7e-09 65.9 81 38.3
ClCG02G008620 Citrullus lanatus HOM05D000995 ORTHO05D001773 2.2e-09 65.5 82 34.1
MELO3C014207.2 Cucumis melo HOM05D000995 ORTHO05D000638 2.2e-09 65.5 80 42.5
AUR62015264 Chenopodium quinoa HOM05D000995 ORTHO05D000638 2.9e-09 65.1 82 40.2
AUR62036388 Chenopodium quinoa HOM05D000995 ORTHO05D000638 2.9e-09 65.1 80 42.5
Hund01802 Selenicereus undatus HOM05D004781 ORTHO05D001773 2.9e-09 65.1 79 36.7
Hund04316 Selenicereus undatus HOM05D004781 ORTHO05D001773 2.9e-09 65.1 79 36.7
Hund29812 Selenicereus undatus HOM05D004781 ORTHO05D001773 2.9e-09 65.1 79 36.7
Hund08788 Selenicereus undatus HOM05D004781 ORTHO05D001773 3.8e-09 64.7 79 36.7
Hund10681 Selenicereus undatus HOM05D004781 ORTHO05D001773 3.8e-09 64.7 79 36.7
Hund17483 Selenicereus undatus HOM05D004781 ORTHO05D001773 3.8e-09 64.7 79 36.7
Hund24690 Selenicereus undatus HOM05D004781 ORTHO05D001773 3.8e-09 64.7 79 36.7
Hund26451 Selenicereus undatus HOM05D004781 ORTHO05D001773 3.8e-09 64.7 79 36.7
Hund29540 Selenicereus undatus HOM05D004781 ORTHO05D001773 3.8e-09 64.7 79 36.7
Hund29568 Selenicereus undatus HOM05D004781 ORTHO05D001773 3.8e-09 64.7 79 36.7
Hund29617 Selenicereus undatus HOM05D004781 ORTHO05D001773 3.8e-09 64.7 79 36.7
Hund29800 Selenicereus undatus HOM05D004781 ORTHO05D001773 3.8e-09 64.7 79 36.7
AUR62027594 Chenopodium quinoa HOM05D000995 ORTHO05D001773 5.0e-09 64.3 80 41.2
MELO3C000923.2 Cucumis melo HOM05D000995 ORTHO05D002620 5.0e-09 64.3 79 38.0
AUR62034805 Chenopodium quinoa HOM05D000995 ORTHO05D001773 6.5e-09 63.9 59 50.8
ClCG09G009920 Citrullus lanatus HOM05D000995 ORTHO05D001773 6.5e-09 63.9 82 34.1
Rhsim03G0094500 Rhododendron simsii HOM05D000995 ORTHO05D000638 6.5e-09 63.9 62 50.0
Hund16293 Selenicereus undatus HOM05D004781 ORTHO05D001773 8.5e-09 63.5 79 35.4
Rhsim05G0112600 Rhododendron simsii HOM05D000995 ORTHO05D001773 1.1e-08 63.2 61 49.2
Hund15627 Selenicereus undatus HOM05D004781 ORTHO05D001773 1.1e-08 63.2 79 35.4
Hund29749 Selenicereus undatus HOM05D004781 ORTHO05D001773 1.1e-08 63.2 79 36.7
EL10Ac1g02017 Beta vulgaris HOM05D000995 ORTHO05D000638 1.5e-08 62.8 65 46.2
MELO3C027512.2 Cucumis melo HOM05D000995 ORTHO05D000638 1.9e-08 62.4 81 37.0
EL10Ac3g05450 Beta vulgaris HOM05D000995 ORTHO05D001773 2.5e-08 62.0 65 46.2
EL10Ac5g11830 Beta vulgaris HOM05D000995 ORTHO05D001773 2.5e-08 62.0 65 46.2
EL10Ac7g17947 Beta vulgaris HOM05D000995 ORTHO05D000638 2.5e-08 62.0 65 46.2
EL10As7g23760 Beta vulgaris HOM05D000995 ORTHO05D001773 2.5e-08 62.0 65 46.2
Nitab4.5_0000522g0060 Nicotiana tabacum HOM05D000050 ORTHO05D000380 2.5e-08 62.0 70 48.6
Rhsim09G0065400 Rhododendron simsii HOM05D000995 ORTHO05D000638 2.5e-08 62.0 84 41.7
Rhsim05G0140400 Rhododendron simsii HOM05D000995 ORTHO05D001773 3.2e-08 61.6 61 47.5
Hund13033 Selenicereus undatus HOM05D004781 ORTHO05D001773 4.2e-08 61.2 79 34.2
ClCG08G006380 Citrullus lanatus HOM05D000995 ORTHO05D001773 5.5e-08 60.8 82 32.9
QL07p006782 Quercus lobata HOM05D000995 ORTHO05D002620 5.5e-08 60.8 74 39.2
RhsimUnG0218100 Rhododendron simsii HOM05D000995 ORTHO05D001773 5.5e-08 60.8 62 48.4
EL10Ac4g08443 Beta vulgaris HOM05D000995 ORTHO05D001773 7.2e-08 60.5 65 44.6
EL10Ac5g11925 Beta vulgaris HOM05D000995 ORTHO05D001773 7.2e-08 60.5 65 44.6
MELO3C019586.2 Cucumis melo HOM05D000995 ORTHO05D000638 7.2e-08 60.5 82 30.5
Hund23885 Selenicereus undatus HOM05D004781 ORTHO05D001773 7.2e-08 60.5 79 35.4
Sed0018066 Sechium edule HOM05D000995 ORTHO05D000638 9.4e-08 60.1 60 43.3
Hund10446 Selenicereus undatus HOM05D004781 ORTHO05D001773 9.4e-08 60.1 79 34.2
CAN.G1445.3 Capsicum annuum HOM05D003617 ORTHO05D010478 1.6e-07 59.3 51 51.0
Sed0026097 Sechium edule HOM05D000995 ORTHO05D000638 2.1e-07 58.9 66 43.9
Hund29171 Selenicereus undatus HOM05D004781 ORTHO05D001773 2.1e-07 58.9 62 41.9
QL02p003670 Quercus lobata HOM05D000995 ORTHO05D001773 2.7e-07 58.5 72 37.5
QL07p017318 Quercus lobata HOM05D000995 ORTHO05D001773 2.7e-07 58.5 72 37.5
QL08p015694 Quercus lobata HOM05D000995 ORTHO05D001773 2.7e-07 58.5 72 38.9
Sopen12g026610 Solanum pennellii HOM05D003617 ORTHO05D010478 2.7e-07 58.5 69 39.1
PGSC0003DMG400045242 Solanum tuberosum HOM05D003617 ORTHO05D010478 3.6e-07 58.2 43 55.8
CAN.G1525.6 Capsicum annuum HOM05D000995 ORTHO05D007165 4.7e-07 57.8 43 58.1
MELO3C000447.2 Cucumis melo HOM05D000995 ORTHO05D000638 4.7e-07 57.8 82 31.7
QL02p080036 Quercus lobata HOM05D000995 ORTHO05D001773 4.7e-07 57.8 72 37.5
QL05p048948 Quercus lobata HOM05D000995 ORTHO05D001773 4.7e-07 57.8 72 37.5
QL06p019608 Quercus lobata HOM05D000995 ORTHO05D001773 4.7e-07 57.8 72 37.5
QL08p038287 Quercus lobata HOM05D000995 ORTHO05D001773 4.7e-07 57.8 72 37.5
QL93p0181_0012 Quercus lobata HOM05D000995 ORTHO05D001773 4.7e-07 57.8 72 37.5
QL93p0209_0006 Quercus lobata HOM05D000995 ORTHO05D001773 4.7e-07 57.8 72 37.5
Sopen09g017340 Solanum pennellii HOM05D000995 ORTHO05D000638 1.0e-06 56.6 46 54.3
Peaxi162Scf00466g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 1.4e-06 56.2 43 55.8
PGSC0003DMG400046252 Solanum tuberosum HOM05D000995 ORTHO05D010478 1.8e-06 55.8 43 53.5
Nitab4.5_0004469g0130 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.3e-06 55.5 29 82.8
PGSC0003DMG400023003 Solanum tuberosum HOM05D000995 ORTHO05D000638 2.3e-06 55.5 72 38.9
PGSC0003DMG400039284 Solanum tuberosum HOM05D003617 ORTHO05D010478 2.3e-06 55.5 43 53.5
Nitab4.5_0000109g0010 Nicotiana tabacum HOM05D000995 ORTHO05D010478 3.0e-06 55.1 43 53.5
PGSC0003DMG400045313 Solanum tuberosum HOM05D003617 ORTHO05D007165 3.0e-06 55.1 41 56.1
FAN03G0592 Fragaria x ananassa HOM05D000995 ORTHO05D002620 4.0e-06 54.7 80 32.5
Sopen11g010720 Solanum pennellii HOM05D003617 ORTHO05D007165 4.0e-06 54.7 72 37.5
COL.COLO4_17167 Corchorus olitorius HOM05D016252 ORTHO05D000638 5.2e-06 54.3 62 45.2
FAN21G1141 Fragaria x ananassa HOM05D000995 ORTHO05D002620 5.2e-06 54.3 81 33.3
Sopen06g006570 Solanum pennellii HOM05D000995 ORTHO05D002620 5.2e-06 54.3 43 53.5
FAN21G3797 Fragaria x ananassa HOM05D000995 ORTHO05D002620 8.8e-06 53.5 81 33.3
FAN28G2204 Fragaria x ananassa HOM05D000995 ORTHO05D002620 8.8e-06 53.5 81 33.3


User provided reference genes

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