Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000480g0040 Nicotiana tabacum HOM05D000367 ORTHO05D019840 1.2e-28 129.0 61 100.0
Peaxi162Scf00152g00932 Petunia axillaris HOM05D000367 ORTHO05D019840 8.5e-22 106.3 61 80.3
CAN.G523.54 Capsicum annuum HOM05D000367 ORTHO05D001438 2.8e-17 91.3 59 71.2
Sopen01g047850 Solanum pennellii HOM05D000367 ORTHO05D001438 2.8e-17 91.3 59 72.9
PGSC0003DMG400012579 Solanum tuberosum HOM05D000367 ORTHO05D001438 6.3e-17 90.1 59 71.2
Peaxi162Scf01060g00011 Petunia axillaris HOM05D000367 ORTHO05D001438 2.4e-16 88.2 59 69.5
Nitab4.5_0001619g0010 Nicotiana tabacum HOM05D000367 ORTHO05D001438 5.3e-16 87.0 59 67.8
Nitab4.5_0000863g0250 Nicotiana tabacum HOM05D000367 ORTHO05D001438 1.3e-14 82.4 59 66.1
TAR628G0286 Trochodendron aralioides HOM05D000367 ORTHO05D001438 9.4e-13 76.3 59 62.7
Dinv24179 Davidia involucrata HOM05D000367 ORTHO05D001438 1.2e-12 75.9 59 61.0
SGA_v2.0_scaffold52G18995 Striga asiatica HOM05D000367 ORTHO05D001438 1.6e-12 75.5 59 64.4
Dinv09020 Davidia involucrata HOM05D000367 ORTHO05D001438 1.0e-11 72.8 59 59.3
Migut.N03302 Erythranthe guttata HOM05D000367 ORTHO05D001438 1.0e-11 72.8 59 55.9
Hma1.2p1_0522F.1_g171750 Hydrangea macrophylla HOM05D000367 ORTHO05D001438 1.0e-11 72.8 60 58.3
TAR381G1134 Trochodendron aralioides HOM05D000367 ORTHO05D001438 1.4e-11 72.4 59 62.7
Lalb_Chr11g0075421 Lupinus albus HOM05D000367 ORTHO05D001438 1.8e-11 72.0 59 61.0
Rhsim11G0137400 Rhododendron simsii HOM05D000367 ORTHO05D001438 1.8e-11 72.0 60 60.0
Actinidia24001 Actinidia chinensis HOM05D000367 ORTHO05D001438 3.0e-11 71.2 59 57.6
CSS0003477 Camellia sinensis var. sinensis HOM05D000367 ORTHO05D001438 3.0e-11 71.2 59 57.6
CSS0014971 Camellia sinensis var. sinensis HOM05D000367 ORTHO05D001438 3.0e-11 71.2 59 57.6
MSTRG.25399 Avicennia marina HOM05D000367 ORTHO05D001438 3.9e-11 70.9 59 61.0
Nn5g30071 Nelumbo nucifera HOM05D000367 ORTHO05D001438 3.9e-11 70.9 59 61.0
Oeu000250.1 Olea europaea HOM05D000367 ORTHO05D001438 3.9e-11 70.9 57 59.6
Migut.C01165 Erythranthe guttata HOM05D000367 ORTHO05D001438 5.1e-11 70.5 59 57.6
vmacro01832 Vaccinium macrocarpon HOM05D000367 ORTHO05D001438 5.1e-11 70.5 59 57.6
CANSAT01G2018 Cannabis sativa HOM05D000367 ORTHO05D001438 6.7e-11 70.1 57 61.4
SGA_v2.0_scaffold24G10487 Striga asiatica HOM05D000367 ORTHO05D001438 1.1e-10 69.3 43 79.1
Actinidia00279 Actinidia chinensis HOM05D000367 ORTHO05D001438 2.0e-10 68.6 59 54.2
CSS0044304 Camellia sinensis var. sinensis HOM05D000367 ORTHO05D001438 2.0e-10 68.6 59 55.9
Rhsim05G0104700 Rhododendron simsii HOM05D000367 ORTHO05D001438 2.0e-10 68.6 59 55.9
Cc02_g21370 Coffea canephora HOM05D000367 ORTHO05D001438 4.4e-10 67.4 59 57.6
Lalb_Chr08g0231011 Lupinus albus HOM05D000367 ORTHO05D001438 4.4e-10 67.4 59 57.6
Glyma.18G016200 Glycine max HOM05D000367 ORTHO05D001438 5.7e-10 67.0 59 57.6
AUR62031070 Chenopodium quinoa HOM05D000367 ORTHO05D001438 7.4e-10 66.6 57 56.1
MBI02_g23215_MAGBIO Magnolia biondii HOM05D000367 ORTHO05D001438 9.7e-10 66.2 59 55.9
MBI02_g27289_MAGBIO Magnolia biondii HOM05D000367 ORTHO05D001438 9.7e-10 66.2 59 55.9
MD09G1219300 Malus domestica HOM05D000367 ORTHO05D001438 9.7e-10 66.2 55 60.0
TAR376G0492 Trochodendron aralioides HOM05D000367 ORTHO05D001438 9.7e-10 66.2 57 57.9
Glyma.11G241000 Glycine max HOM05D000367 ORTHO05D001438 1.3e-09 65.9 59 55.9
MD17G1202800 Malus domestica HOM05D000367 ORTHO05D001438 1.3e-09 65.9 57 57.9
Oeu019234.1 Olea europaea HOM05D000367 ORTHO05D001438 1.7e-09 65.5 57 57.9
Phvul.001G252900 Phaseolus vulgaris HOM05D000367 ORTHO05D001438 1.7e-09 65.5 59 55.9
arahy.Tifrunner.gnm1.ann1.1IX1EK Arachis hypogaea HOM05D000367 ORTHO05D001438 2.2e-09 65.1 59 55.9
arahy.Tifrunner.gnm1.ann1.QLB2P0 Arachis hypogaea HOM05D000367 ORTHO05D001438 2.2e-09 65.1 59 55.9
EL10Ac8g20434 Beta vulgaris HOM05D000367 ORTHO05D019840 2.8e-09 64.7 58 53.4
AUR62036728 Chenopodium quinoa HOM05D000367 ORTHO05D001438 2.8e-09 64.7 57 52.6
VMungo1383G2915 Vigna mungo HOM05D000367 ORTHO05D001438 2.8e-09 64.7 59 54.2
Aqoxy6G00758 Aquilegia oxysepala HOM05D000367 ORTHO05D001438 3.7e-09 64.3 57 54.4
AUR62014865 Chenopodium quinoa HOM05D000367 ORTHO05D001438 3.7e-09 64.3 57 54.4
Prupe.3G078100 Prunus persica HOM05D000367 ORTHO05D001438 3.7e-09 64.3 57 56.1
Atru.chr1.3483 Acer truncatum HOM05D000367 ORTHO05D001438 4.8e-09 63.9 59 54.2
Gohir.A02G142300 Gossypium hirsutum HOM05D000367 ORTHO05D001438 4.8e-09 63.9 55 63.6
Gohir.D03G038000 Gossypium hirsutum HOM05D000367 ORTHO05D001438 4.8e-09 63.9 55 63.6
Gorai.003G040000 Gossypium raimondii HOM05D000367 ORTHO05D001438 4.8e-09 63.9 55 63.6
PSO210G0906 Papaver somniferum HOM05D000367 ORTHO05D001438 4.8e-09 63.9 59 52.5
PSO447G0252 Papaver somniferum HOM05D000367 ORTHO05D001438 4.8e-09 63.9 59 52.5
Duzib147G0618 Durio zibethinus HOM05D000367 ORTHO05D001438 8.2e-09 63.2 57 59.6
Gohir.D12G086100 Gossypium hirsutum HOM05D000367 ORTHO05D001438 8.2e-09 63.2 58 62.1
Hund23808 Selenicereus undatus HOM05D000367 ORTHO05D019840 8.2e-09 63.2 58 53.4
Thecc.01G098800 Theobroma cacao HOM05D000367 ORTHO05D001438 8.2e-09 63.2 57 57.9
arahy.Tifrunner.gnm1.ann1.2HEE5R Arachis hypogaea HOM05D000367 ORTHO05D001438 1.1e-08 62.8 59 52.5
arahy.Tifrunner.gnm1.ann1.Y5SFGR Arachis hypogaea HOM05D000367 ORTHO05D001438 1.1e-08 62.8 59 52.5
COL.COLO4_27271 Corchorus olitorius HOM05D000367 ORTHO05D001438 1.1e-08 62.8 57 57.9
RcHm_v2.0_Chr2g0136911 Rosa chinensis HOM05D000367 ORTHO05D001438 1.1e-08 62.8 54 59.3
CiPaw.04G101400 Carya illinoinensis HOM05D000367 ORTHO05D001438 1.4e-08 62.4 57 56.1
PSO781G0091 Papaver somniferum HOM05D000367 ORTHO05D001438 1.4e-08 62.4 59 49.2
Potri.005G073900 Populus trichocarpa HOM05D000367 ORTHO05D001438 1.4e-08 62.4 59 52.5
ECA236G3962 Erigeron canadensis HOM05D000367 ORTHO05D001438 1.8e-08 62.0 54 53.7
Lsat_1_v5_gn_5_108120 Lactuca sativa HOM05D000367 ORTHO05D001438 2.4e-08 61.6 59 54.2
Lj6g0022484 Lotus japonicus HOM05D000367 ORTHO05D001438 2.4e-08 61.6 59 50.8
Medtr3g087030 Medicago truncatula HOM05D000367 ORTHO05D001438 2.4e-08 61.6 59 52.5
PGR044G1031 Punica granatum HOM05D000367 ORTHO05D001438 2.4e-08 61.6 55 60.0
Ca_16519_v3 Cicer arietinum L. HOM05D000367 ORTHO05D001438 3.1e-08 61.2 59 54.2
Ciclev10025609m.g Citrus clementina HOM05D000367 ORTHO05D001438 3.1e-08 61.2 59 54.2
DCAR_001781 Daucus carota HOM05D000367 ORTHO05D001438 3.1e-08 61.2 59 50.8
Duzib187G1321 Durio zibethinus HOM05D000367 ORTHO05D001438 3.1e-08 61.2 57 59.6
Hund21208 Selenicereus undatus HOM05D000367 ORTHO05D001438 3.1e-08 61.2 57 50.9
GSVIVG01006041001 Vitis vinifera HOM05D000367 ORTHO05D001438 3.1e-08 61.2 59 55.9
Aqoxy6G00660 Aquilegia oxysepala HOM05D000367 ORTHO05D001438 4.1e-08 60.8 59 50.8
Psat5g090520 Pisum sativum HOM05D000367 ORTHO05D001438 4.1e-08 60.8 59 54.2
ATR0782G046 Amborella trichopoda HOM05D000367 ORTHO05D001438 5.3e-08 60.5 34 85.3
CDE10G0863 Ceratophyllum demersum HOM05D000649 ORTHO05D000513 5.3e-08 60.5 61 55.7
Manes.06G008600 Manihot esculenta HOM05D000367 ORTHO05D001438 5.3e-08 60.5 59 50.8
Sabra07G0078300 Salix brachista HOM05D000367 ORTHO05D001438 5.3e-08 60.5 59 50.8
Cfa002631 Carpinus fangiana HOM05D000367 ORTHO05D001438 6.9e-08 60.1 55 60.0
HanXRQChr10g0291721 Helianthus annuus HOM05D000367 ORTHO05D001438 6.9e-08 60.1 59 55.9
Sabra05G0060500 Salix brachista HOM05D000367 ORTHO05D001438 6.9e-08 60.1 59 52.5
CiPaw.03G143500 Carya illinoinensis HOM05D000367 ORTHO05D001438 9.1e-08 59.7 57 56.1
ECA234G0025 Erigeron canadensis HOM05D000367 ORTHO05D001438 9.1e-08 59.7 59 52.5
Eucgr.K03340 Eucalyptus grandis HOM05D000367 ORTHO05D001438 9.1e-08 59.7 59 54.2
Potri.007G094900 Populus trichocarpa HOM05D000367 ORTHO05D001438 9.1e-08 59.7 59 50.8
SEGI_22084 Sequoiadendron giganteum HOM05D000367 ORTHO05D001438 9.1e-08 59.7 59 49.2
BcaC02g08668 Brassica carinata HOM05D000367 ORTHO05D001438 1.2e-07 59.3 54 57.4
Lsat_1_v5_gn_7_82060 Lactuca sativa HOM05D000367 ORTHO05D001438 1.2e-07 59.3 57 49.1
Lj2g0028108 Lotus japonicus HOM05D000367 ORTHO05D001438 1.2e-07 59.3 59 50.8
Sed0012402 Sechium edule HOM05D000367 ORTHO05D001438 1.2e-07 59.3 55 52.7
C04p51410 Brassica napus HOM05D000367 ORTHO05D001438 1.5e-07 58.9 54 57.4
BolC4t26733H Brassica oleracea HOM05D000367 ORTHO05D001438 1.5e-07 58.9 54 57.4
HanXRQChr11g0338041 Helianthus annuus HOM05D000367 ORTHO05D001438 1.5e-07 58.9 55 56.4
BcaC02g08714 Brassica carinata HOM05D000367 ORTHO05D001438 2.0e-07 58.5 54 55.6
Os05g0333500 Oryza sativa ssp. japonica HOM05D000367 ORTHO05D001438 2.0e-07 58.5 59 54.2
Os05g0334000 Oryza sativa ssp. japonica HOM05D000367 ORTHO05D001438 2.0e-07 58.5 59 54.2
Os05g0334400 Oryza sativa ssp. japonica HOM05D000367 ORTHO05D001438 2.0e-07 58.5 59 54.2
MELO3C018950.2 Cucumis melo HOM05D000367 ORTHO05D001438 2.6e-07 58.2 55 54.5
VMungo0251G1290 Vigna mungo HOM05D000367 ORTHO05D001438 2.6e-07 58.2 59 52.5
Haze_24897 Corylus avellana HOM05D000367 ORTHO05D001438 3.4e-07 57.8 55 58.2
CsaV3_4G008850 Cucumis sativus L. HOM05D000367 ORTHO05D001438 3.4e-07 57.8 55 52.7
TPR.G16019 Trifolium pratense HOM05D000367 ORTHO05D001438 3.4e-07 57.8 59 47.5
CDE10G0088 Ceratophyllum demersum HOM05D000367 ORTHO05D001438 4.5e-07 57.4 56 57.1
Sp4g01390 Schrenkiella parvula HOM05D000367 ORTHO05D001438 4.5e-07 57.4 54 55.6
Zm00001eb172900 Zea mays HOM05D000367 ORTHO05D001438 4.5e-07 57.4 59 50.8
Thhalv10000164m.g Eutrema salsugineum HOM05D000367 ORTHO05D001438 5.9e-07 57.0 54 55.6
Glyma.08G134400 Glycine max HOM05D000367 ORTHO05D001438 5.9e-07 57.0 60 53.3
Zm00001eb416450 Zea mays HOM05D000367 ORTHO05D001438 5.9e-07 57.0 59 54.2
AL7G12250 Arabidopsis lyrata HOM05D000367 ORTHO05D001438 7.7e-07 56.6 54 55.6
AL4G11860 Arabidopsis lyrata HOM05D000367 ORTHO05D001438 1.0e-06 56.2 54 55.6
A04p16830 Brassica napus HOM05D000367 ORTHO05D001438 1.0e-06 56.2 54 55.6
Carub.0007s0192 Capsella rubella HOM05D000367 ORTHO05D001438 1.0e-06 56.2 54 55.6
TWI53G0718 Tripterygium wilfordii HOM05D000367 ORTHO05D001438 1.3e-06 55.8 55 52.7
AT4G39960 Arabidopsis thaliana HOM05D000367 ORTHO05D001438 1.7e-06 55.5 54 55.6
Sc16g0009740 Simmondsia chinensis HOM05D000367 ORTHO05D001438 1.7e-06 55.5 57 54.4
CARHR246720 Cardamine hirsuta HOM05D000367 ORTHO05D001438 2.2e-06 55.1 54 53.7
THA.LOC104824881 Tarenaya hassleriana HOM05D000367 ORTHO05D001438 2.2e-06 55.1 54 55.6
TWI59G0302 Tripterygium wilfordii HOM05D000367 ORTHO05D001438 2.2e-06 55.1 55 52.7
TWI74G1318 Tripterygium wilfordii HOM05D000367 ORTHO05D001438 2.2e-06 55.1 54 53.7
TWI77G0246 Tripterygium wilfordii HOM05D000367 ORTHO05D001438 2.9e-06 54.7 60 51.7
BraA04t17316Z Brassica rapa HOM05D000367 ORTHO05D001438 3.8e-06 54.3 54 53.7
Carub.0004s0154 Capsella rubella HOM05D000367 ORTHO05D001438 3.8e-06 54.3 54 53.7
Thhalv10025198m.g Eutrema salsugineum HOM05D000367 ORTHO05D001438 3.8e-06 54.3 54 53.7
FvH4_6g30510 Fragaria vesca HOM05D000367 ORTHO05D001438 3.8e-06 54.3 57 50.9
FAN02G1247 Fragaria x ananassa HOM05D000367 ORTHO05D001438 3.8e-06 54.3 57 50.9
FAN09G0014 Fragaria x ananassa HOM05D000367 ORTHO05D001438 3.8e-06 54.3 57 50.9
FAN14G5144 Fragaria x ananassa HOM05D000367 ORTHO05D001438 3.8e-06 54.3 57 50.9
ClCG10G009010 Citrullus lanatus HOM05D000367 ORTHO05D001438 5.0e-06 53.9 59 47.5
Sabra12G0075000 Salix brachista HOM05D001091 ORTHO05D001020 5.0e-06 53.9 55 54.5
THA.LOC104807682 Tarenaya hassleriana HOM05D000367 ORTHO05D001438 5.0e-06 53.9 32 78.1
Thecc.02G136900 Theobroma cacao HOM05D000367 ORTHO05D019840 6.5e-06 53.5 54 46.3


User provided reference genes

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