Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000480g0030 Nicotiana tabacum HOM05D007132 ORTHO05D009120 2.3e-56 221.9 100 100.0
Nitab4.5_0000030g0380 Nicotiana tabacum HOM05D007132 ORTHO05D009120 9.2e-34 146.7 77 87.0
Nitab4.5_0004157g0010 Nicotiana tabacum HOM05D007132 ORTHO05D009120 3.5e-33 144.8 75 88.0
Sopen08g024160 Solanum pennellii HOM05D007132 ORTHO05D009120 3.2e-26 121.7 79 69.6
Solyc08g075510.4 Solanum lycopersicum HOM05D007132 ORTHO05D009120 7.1e-26 120.6 79 68.4
PGSC0003DMG400001970 Solanum tuberosum HOM05D007132 ORTHO05D009120 9.3e-26 120.2 79 69.6
Peaxi162Scf00053g00715 Petunia axillaris HOM05D007132 ORTHO05D009120 8.7e-24 113.6 80 63.8
CAN.G1026.1 Capsicum annuum HOM05D007132 ORTHO05D009120 9.6e-23 110.2 76 67.1
Nitab4.5_0000898g0130 Nicotiana tabacum HOM05D007132 ORTHO05D009120 1.1e-21 106.7 77 67.5
SGA_v2.0_scaffold111G31350 Striga asiatica HOM05D007132 ORTHO05D009120 2.6e-20 102.1 86 55.8
Cpa.g.sc90.24 Carica papaya HOM05D004914 ORTHO05D006512 3.4e-20 101.7 82 58.5
CANSAT11G0857 Cannabis sativa HOM05D007132 ORTHO05D009120 4.5e-20 101.3 75 61.3
TWI75G0244 Tripterygium wilfordii HOM05D007132 ORTHO05D009120 5.8e-20 100.9 75 62.7
Oeu046789.1 Olea europaea HOM05D007132 ORTHO05D009120 9.9e-20 100.1 79 58.2
COL.COLO4_33243 Corchorus olitorius HOM05D007132 ORTHO05D009120 1.3e-19 99.8 79 58.2
MSTRG.1761 Avicennia marina HOM05D007132 ORTHO05D009120 1.7e-19 99.4 80 57.5
CiPaw.11G075400 Carya illinoinensis HOM05D007132 ORTHO05D009120 3.8e-19 98.2 80 56.2
Hund11034 Selenicereus undatus HOM05D007132 ORTHO05D009120 3.8e-19 98.2 81 56.8
Psat2g145880 Pisum sativum HOM05D007132 ORTHO05D009120 4.9e-19 97.8 73 61.6
CSS0020867 Camellia sinensis var. sinensis HOM05D007132 ORTHO05D009120 6.4e-19 97.4 82 54.9
Duzib168G0014 Durio zibethinus HOM05D007132 ORTHO05D009120 6.4e-19 97.4 75 60.0
TPR.G5247 Trifolium pratense HOM05D007132 ORTHO05D009120 6.4e-19 97.4 76 59.2
Thecc.09G252800 Theobroma cacao HOM05D007132 ORTHO05D009120 8.4e-19 97.1 75 60.0
EL10Ac2g04081 Beta vulgaris HOM05D007132 ORTHO05D009120 1.1e-18 96.7 77 59.7
Cc08_g05480 Coffea canephora HOM05D007132 ORTHO05D009120 1.1e-18 96.7 81 58.0
Eucgr.E01138 Eucalyptus grandis HOM05D007132 ORTHO05D009120 1.1e-18 96.7 81 56.8
Atru.chr8.2638 Acer truncatum HOM05D007132 ORTHO05D009120 1.4e-18 96.3 77 61.0
Haze_08441 Corylus avellana HOM05D007132 ORTHO05D009120 2.4e-18 95.5 78 59.0
unitig_46.g18229 Utricularia gibba HOM05D007132 ORTHO05D009120 2.4e-18 95.5 80 56.2
BcaB01g01051 Brassica carinata HOM05D007132 ORTHO05D009120 3.2e-18 95.1 76 57.9
Manes.S095221 Manihot esculenta HOM05D007132 ORTHO05D009120 3.2e-18 95.1 87 57.5
PGR042G0795 Punica granatum HOM05D007132 ORTHO05D009120 3.2e-18 95.1 81 56.8
Aa31LG9G15710 Aethionema arabicum HOM05D007132 ORTHO05D009120 4.2e-18 94.7 76 56.6
Cfa012869 Carpinus fangiana HOM05D007132 ORTHO05D009120 4.2e-18 94.7 78 59.0
AUR62009339 Chenopodium quinoa HOM05D007132 ORTHO05D009120 4.2e-18 94.7 77 58.4
DCAR_028364 Daucus carota HOM05D007132 ORTHO05D009120 4.2e-18 94.7 85 51.8
Sabra09G0016800 Salix brachista HOM05D007132 ORTHO05D009120 4.2e-18 94.7 77 61.0
Sp2g03890 Schrenkiella parvula HOM05D007132 ORTHO05D009120 4.2e-18 94.7 76 56.6
MD05G1209900 Malus domestica HOM05D007132 ORTHO05D009120 5.4e-18 94.4 77 58.4
BcaC01g01945 Brassica carinata HOM05D007132 ORTHO05D009120 7.1e-18 94.0 77 55.8
C03p70370 Brassica napus HOM05D007132 ORTHO05D009120 7.1e-18 94.0 77 55.8
BolC3t19289H Brassica oleracea HOM05D007132 ORTHO05D009120 7.1e-18 94.0 77 55.8
Potri.009G025400 Populus trichocarpa HOM05D007132 ORTHO05D009120 7.1e-18 94.0 77 61.0
CARHR154210 Cardamine hirsuta HOM05D007132 ORTHO05D009120 1.2e-17 93.2 76 55.3
Thhalv10002595m.g Eutrema salsugineum HOM05D007132 ORTHO05D009120 1.2e-17 93.2 76 55.3
Gohir.D09G105701 Gossypium hirsutum HOM05D007132 ORTHO05D009120 1.2e-17 93.2 75 58.7
Gorai.006G123100 Gossypium raimondii HOM05D007132 ORTHO05D009120 1.2e-17 93.2 75 58.7
Prupe.4G147600 Prunus persica HOM05D007132 ORTHO05D009120 1.2e-17 93.2 77 57.1
Actinidia32785 Actinidia chinensis HOM05D007132 ORTHO05D009120 2.1e-17 92.4 83 54.2
BraA06t25207Z Brassica rapa HOM05D007132 ORTHO05D009120 2.1e-17 92.4 77 54.5
Ciclev10031829m.g Citrus clementina HOM05D007132 ORTHO05D009120 2.1e-17 92.4 76 57.9
A06p21200 Brassica napus HOM05D007132 ORTHO05D009120 2.7e-17 92.0 77 54.5
Potri.001G233200 Populus trichocarpa HOM05D007132 ORTHO05D009120 2.7e-17 92.0 77 61.0
SalBow8G0736 Salvia bowleyana HOM05D007132 ORTHO05D009120 2.7e-17 92.0 81 54.3
Sc01g0005800 Simmondsia chinensis HOM05D007132 ORTHO05D009120 2.7e-17 92.0 77 57.1
Glyma.11G089600 Glycine max HOM05D007132 ORTHO05D009120 3.5e-17 91.7 76 57.9
MBI04_g06282_MAGBIO Magnolia biondii HOM05D007132 ORTHO05D009120 3.5e-17 91.7 80 56.2
arahy.Tifrunner.gnm1.ann1.63YFX7 Arachis hypogaea HOM05D007132 ORTHO05D009120 4.6e-17 91.3 82 57.3
arahy.Tifrunner.gnm1.ann1.WE0KUF Arachis hypogaea HOM05D007132 ORTHO05D009120 4.6e-17 91.3 82 57.3
FAN25G2365 Fragaria x ananassa HOM05D007132 ORTHO05D009120 4.6e-17 91.3 75 56.0
Gohir.A09G109100 Gossypium hirsutum HOM05D007132 ORTHO05D009120 4.6e-17 91.3 75 58.7
HanXRQChr12g0382251 Helianthus annuus HOM05D007132 ORTHO05D009120 4.6e-17 91.3 80 56.2
Medtr5g025190 Medicago truncatula HOM05D007132 ORTHO05D009120 4.6e-17 91.3 77 54.5
Lj8A344T21 Lonicera japonica HOM05D007132 ORTHO05D009120 6.0e-17 90.9 81 54.3
Lj8C1T2 Lonicera japonica HOM05D007132 ORTHO05D009120 6.0e-17 90.9 81 54.3
TAR629G3242 Trochodendron aralioides HOM05D007132 ORTHO05D009120 6.0e-17 90.9 81 55.6
vmacro00083 Vaccinium macrocarpon HOM05D007132 ORTHO05D009120 7.9e-17 90.5 82 53.7
Phvul.002G120400 Phaseolus vulgaris HOM05D007132 ORTHO05D009120 1.0e-16 90.1 76 55.3
VMungo1215G2638 Vigna mungo HOM05D007132 ORTHO05D009120 1.0e-16 90.1 76 55.3
FvH4_3g16420 Fragaria vesca HOM05D007132 ORTHO05D009120 1.8e-16 89.4 75 56.0
Ah.10g035250 Amaranthus hybridus HOM05D001758 ORTHO05D005969 3.9e-16 88.2 77 55.8
ECA233G5682 Erigeron canadensis HOM05D003740 ORTHO05D004611 6.7e-16 87.4 85 49.4
Lsat_1_v5_gn_6_15181 Lactuca sativa HOM05D007132 ORTHO05D009120 6.7e-16 87.4 84 52.4
CDE02G3577 Ceratophyllum demersum HOM05D007132 ORTHO05D009120 8.7e-16 87.0 81 53.1
FAN11G4000 Fragaria x ananassa HOM05D007132 ORTHO05D009120 8.7e-16 87.0 75 56.0
AL5G24560 Arabidopsis lyrata HOM05D007132 ORTHO05D009120 1.9e-15 85.9 77 53.2
RcHm_v2.0_Chr5g0027441 Rosa chinensis HOM05D007132 ORTHO05D009120 2.5e-15 85.5 78 52.6
AT3G45880 Arabidopsis thaliana HOM05D007132 ORTHO05D009120 3.3e-15 85.1 77 51.9
PSO541G5430 Papaver somniferum HOM05D007132 ORTHO05D009120 3.3e-15 85.1 77 55.8
PSO675G1526 Papaver somniferum HOM05D007132 ORTHO05D009120 3.3e-15 85.1 77 55.8
Carub.0005s1173 Capsella rubella HOM05D007132 ORTHO05D009120 4.3e-15 84.7 79 50.6
Lj2g0003748 Lotus japonicus HOM05D007132 ORTHO05D009120 4.3e-15 84.7 76 53.9
Lalb_Chr05g0215041 Lupinus albus HOM05D007132 ORTHO05D009120 7.4e-15 84.0 80 48.8
QL12p004376 Quercus lobata HOM05D007132 ORTHO05D009120 7.4e-15 84.0 84 51.2
Nn1g09371 Nelumbo nucifera HOM05D007132 ORTHO05D009120 9.6e-15 83.6 84 51.2
Zm00001eb316510 Zea mays HOM05D007132 ORTHO05D009120 2.1e-14 82.4 74 52.7
Aqoxy3G02733 Aquilegia oxysepala HOM05D007132 ORTHO05D009120 2.8e-14 82.0 81 49.4
Os09g0483600 Oryza sativa ssp. japonica HOM05D007132 ORTHO05D009120 2.8e-14 82.0 81 48.1
Pp3c2_13200 Physcomitrium patens HOM05D007132 ORTHO05D009120 1.8e-13 79.3 76 52.6
AUR62023023 Chenopodium quinoa HOM05D007132 ORTHO05D009120 6.9e-13 77.4 54 63.0
AUR62043353 Chenopodium quinoa HOM05D007132 ORTHO05D009120 6.9e-13 77.4 54 63.0
AagrBONN_evm.TU.Sc2ySwM_344.2529 Anthoceros agrestis HOM05D007132 ORTHO05D009120 2.6e-12 75.5 72 48.6
SMO367G0267 Selaginella moellendorffii HOM05D007132 ORTHO05D009120 1.3e-11 73.2 78 48.7
ATR0568G089 Amborella trichopoda HOM05D007132 ORTHO05D009120 2.9e-11 72.0 74 47.3
SEGI_38459 Sequoiadendron giganteum HOM05D007132 ORTHO05D009120 2.9e-11 72.0 75 46.7
Cc02_g31510 Coffea canephora HOM05D007132 ORTHO05D009120 3.8e-11 71.6 40 75.0
THA.LOC104798521 Tarenaya hassleriana HOM05D007132 ORTHO05D009120 1.3e-08 63.2 75 41.3
Sp5g15660 Schrenkiella parvula HOM05D007132 ORTHO05D009120 4.3e-07 58.2 76 40.8


User provided reference genes

Program Settings