Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000477g0160 Nicotiana tabacum HOM05D006168 ORTHO05D007602 6.9e-44 181.0 157 100.0
Peaxi162Scf00643g00537 Petunia axillaris HOM05D006168 ORTHO05D007602 7.4e-38 161.0 150 66.0
Nitab4.5_0002771g0020 Nicotiana tabacum HOM05D006168 ORTHO05D007602 4.5e-35 151.8 131 99.2
Solyc06g072170.2 Solanum lycopersicum HOM05D006168 ORTHO05D007602 3.8e-34 148.7 151 62.3
Sopen06g028470 Solanum pennellii HOM05D006168 ORTHO05D007602 3.8e-34 148.7 151 62.3
PGSC0003DMG400027059 Solanum tuberosum HOM05D006168 ORTHO05D007602 1.1e-33 147.1 151 60.9
CAN.G65.65 Capsicum annuum HOM05D006168 ORTHO05D007602 5.2e-31 138.3 85 81.2
CSS0046866 Camellia sinensis var. sinensis HOM05D006168 ORTHO05D007602 4.4e-30 135.2 86 75.6
Dinv03501 Davidia involucrata HOM05D006168 ORTHO05D007602 2.2e-29 132.9 104 64.4
Dinv03506 Davidia involucrata HOM05D006168 ORTHO05D007602 2.2e-29 132.9 104 64.4
DCAR_011406 Daucus carota HOM05D006168 ORTHO05D007602 2.8e-29 132.5 84 77.4
Lsat_1_v5_gn_2_6441 Lactuca sativa HOM05D006168 ORTHO05D007602 6.3e-29 131.3 86 74.4
MBI06_g12548_MAGBIO Magnolia biondii HOM05D006168 ORTHO05D007602 1.4e-28 130.2 86 86.0
Rhsim12G0137000 Rhododendron simsii HOM05D006168 ORTHO05D007602 2.4e-28 129.4 84 75.0
ECA238G2000 Erigeron canadensis HOM05D006168 ORTHO05D007602 3.1e-28 129.0 86 72.1
HanXRQChr14g0428251 Helianthus annuus HOM05D006168 ORTHO05D007602 4.1e-28 128.6 105 63.8
Duzib114G0883 Durio zibethinus HOM05D006168 ORTHO05D007602 7.0e-28 127.9 104 62.5
Gohir.D05G295400 Gossypium hirsutum HOM05D006168 ORTHO05D007602 9.1e-28 127.5 86 70.9
TAR629G1867 Trochodendron aralioides HOM05D006168 ORTHO05D007602 9.1e-28 127.5 86 80.2
Cc02_g29290 Coffea canephora HOM05D006168 ORTHO05D007602 1.2e-27 127.1 86 73.3
Duzib128G1786 Durio zibethinus HOM05D006168 ORTHO05D007602 1.2e-27 127.1 86 70.9
ECA238G2968 Erigeron canadensis HOM05D000092 ORTHO05D000042 1.6e-27 126.7 84 72.6
Gohir.A05G294800 Gossypium hirsutum HOM05D006168 ORTHO05D007602 1.6e-27 126.7 86 70.9
Gorai.009G312100 Gossypium raimondii HOM05D006168 ORTHO05D007602 4.5e-27 125.2 84 71.4
GSVIVG01024249001 Vitis vinifera HOM05D006168 ORTHO05D007602 4.5e-27 125.2 104 61.5
Nn3g18550 Nelumbo nucifera HOM05D006168 ORTHO05D007602 7.7e-27 124.4 83 71.1
COL.COLO4_12167 Corchorus olitorius HOM05D006168 ORTHO05D007602 1.0e-26 124.0 86 68.6
ECA238G0114 Erigeron canadensis HOM05D006168 ORTHO05D007602 1.0e-26 124.0 85 70.6
ECA238G1897 Erigeron canadensis HOM05D006168 ORTHO05D007602 1.0e-26 124.0 85 70.6
CANSAT35G1332 Cannabis sativa HOM05D006168 ORTHO05D007602 1.7e-26 123.2 86 69.8
Aqoxy2G03978 Aquilegia oxysepala HOM05D006168 ORTHO05D007602 2.2e-26 122.9 86 69.8
Lj5g0014337 Lotus japonicus HOM05D006168 ORTHO05D007602 2.2e-26 122.9 101 62.4
MD14G1246600 Malus domestica HOM05D006168 ORTHO05D007602 2.2e-26 122.9 104 70.2
PGR083G1429 Punica granatum HOM05D006168 ORTHO05D007602 2.9e-26 122.5 100 62.0
Sed0019180 Sechium edule HOM05D006168 ORTHO05D007602 2.9e-26 122.5 107 59.8
CiPaw.16G075600 Carya illinoinensis HOM05D006168 ORTHO05D007602 3.8e-26 122.1 104 61.5
ClCG01G014720 Citrullus lanatus HOM05D006168 ORTHO05D007602 3.8e-26 122.1 86 69.8
MD06G1240400 Malus domestica HOM05D006168 ORTHO05D007602 3.8e-26 122.1 86 80.2
Medtr1g077570 Medicago truncatula HOM05D006168 ORTHO05D007602 3.8e-26 122.1 104 61.5
PSO063G5228 Papaver somniferum HOM05D006168 ORTHO05D007602 3.8e-26 122.1 106 63.2
Sabra04G0045100 Salix brachista HOM05D006168 ORTHO05D007602 3.8e-26 122.1 104 60.6
vmacro16399 Vaccinium macrocarpon HOM05D006168 ORTHO05D007602 5.0e-26 121.7 82 72.0
CDE04G1298 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 6.5e-26 121.3 86 68.6
MELO3C002180.2 Cucumis melo HOM05D006168 ORTHO05D007602 6.5e-26 121.3 106 60.4
QL10p033704 Quercus lobata HOM05D006168 ORTHO05D007602 6.5e-26 121.3 84 72.6
Atru.chr9.17 Acer truncatum HOM05D006168 ORTHO05D007602 8.5e-26 120.9 87 70.1
CsaV3_1G007610 Cucumis sativus L. HOM05D006168 ORTHO05D007602 1.1e-25 120.6 86 68.6
Potri.004G067300 Populus trichocarpa HOM05D006168 ORTHO05D007602 1.1e-25 120.6 86 67.4
Prupe.5G244900 Prunus persica HOM05D006168 ORTHO05D007602 1.1e-25 120.6 99 60.6
Thecc.10G078900 Theobroma cacao HOM05D006168 ORTHO05D007602 1.1e-25 120.6 86 68.6
BolC3t16418H Brassica oleracea HOM05D006168 ORTHO05D007602 1.9e-25 119.8 86 67.4
Manes.02G226600 Manihot esculenta HOM05D006168 ORTHO05D007602 1.9e-25 119.8 86 66.3
MSTRG.4316 Avicennia marina HOM05D006168 ORTHO05D007602 2.5e-25 119.4 103 61.2
BraA03t12572Z Brassica rapa HOM05D006168 ORTHO05D007602 2.5e-25 119.4 86 67.4
Oeu034422.1 Olea europaea HOM05D006168 ORTHO05D007602 2.5e-25 119.4 81 86.4
SGA_v2.0_scaffold387G50509 Striga asiatica HOM05D006168 ORTHO05D007602 2.5e-25 119.4 85 71.8
Ah.14g084700 Amaranthus hybridus HOM05D006168 ORTHO05D007602 3.2e-25 119.0 86 70.9
Psat6g054520 Pisum sativum HOM05D006168 ORTHO05D007602 3.2e-25 119.0 86 68.6
EL10Ac8g18962 Beta vulgaris HOM05D006168 ORTHO05D007602 4.2e-25 118.6 86 70.9
Cfa017805 Carpinus fangiana HOM05D006168 ORTHO05D007602 4.2e-25 118.6 85 67.1
Ciclev10022597m.g Citrus clementina HOM05D006168 ORTHO05D007602 5.5e-25 118.2 102 60.8
Eucgr.H00657 Eucalyptus grandis HOM05D006168 ORTHO05D007602 5.5e-25 118.2 83 69.9
THA.LOC104818656 Tarenaya hassleriana HOM05D006168 ORTHO05D007602 5.5e-25 118.2 86 66.3
Carub.0003s0432 Capsella rubella HOM05D006168 ORTHO05D007602 7.2e-25 117.9 100 71.0
Migut.D02066 Erythranthe guttata HOM05D006168 ORTHO05D007602 7.2e-25 117.9 86 68.6
Phvul.L006301 Phaseolus vulgaris HOM05D006168 ORTHO05D007602 7.2e-25 117.9 97 62.9
VMungo0720G1915 Vigna mungo HOM05D006168 ORTHO05D007602 7.2e-25 117.9 97 62.9
CDE08G0644 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 9.4e-25 117.5 88 68.2
Aa31LG5G15370 Aethionema arabicum HOM05D006168 ORTHO05D007602 1.2e-24 117.1 86 73.3
Glyma.20G216400 Glycine max HOM05D006168 ORTHO05D007602 1.2e-24 117.1 98 64.3
Thhalv10021722m.g Eutrema salsugineum HOM05D006168 ORTHO05D007602 1.6e-24 116.7 86 66.3
Hund08905 Selenicereus undatus HOM05D006168 ORTHO05D007602 2.1e-24 116.3 89 67.4
Glyma.10G174000 Glycine max HOM05D006168 ORTHO05D007602 2.7e-24 115.9 98 63.3
Ca_09928_v3 Cicer arietinum L. HOM05D006168 ORTHO05D007602 4.7e-24 115.2 101 62.4
Haze_18408 Corylus avellana HOM05D006168 ORTHO05D007602 4.7e-24 115.2 85 64.7
Sp3g03900 Schrenkiella parvula HOM05D006168 ORTHO05D007602 8.0e-24 114.4 86 66.3
AL3G15460 Arabidopsis lyrata HOM05D006168 ORTHO05D007602 1.0e-23 114.0 86 75.6
AT3G05070 Arabidopsis thaliana HOM05D006168 ORTHO05D007602 1.0e-23 114.0 86 77.9
CARHR079400 Cardamine hirsuta HOM05D006168 ORTHO05D007602 1.0e-23 114.0 86 65.1
AUR62025335 Chenopodium quinoa HOM05D006168 ORTHO05D007602 1.8e-23 113.2 84 67.9
A05p42500 Brassica napus HOM05D006168 ORTHO05D007602 2.3e-23 112.8 86 75.6
C05p62160 Brassica napus HOM05D006168 ORTHO05D007602 2.3e-23 112.8 86 75.6
BolC5t34874H Brassica oleracea HOM05D006168 ORTHO05D007602 2.3e-23 112.8 86 75.6
BraA05t23002Z Brassica rapa HOM05D006168 ORTHO05D007602 2.3e-23 112.8 86 75.6
Lalb_Chr21g0311691 Lupinus albus HOM05D006168 ORTHO05D007602 2.3e-23 112.8 87 66.7
AUR62028326 Chenopodium quinoa HOM05D006168 ORTHO05D007602 4.0e-23 112.1 88 65.9
FvH4_5g18550 Fragaria vesca HOM05D006168 ORTHO05D007602 8.8e-23 110.9 86 60.5
FAN04G0186 Fragaria x ananassa HOM05D006168 ORTHO05D007602 8.8e-23 110.9 86 60.5
FAN08G3581 Fragaria x ananassa HOM05D006168 ORTHO05D007602 8.8e-23 110.9 86 60.5
FAN18G0639 Fragaria x ananassa HOM05D006168 ORTHO05D007602 8.8e-23 110.9 86 60.5
RcHm_v2.0_Chr7g0176961 Rosa chinensis HOM05D006168 ORTHO05D007602 1.2e-22 110.5 86 60.5
SEGI_05677 Sequoiadendron giganteum HOM05D006168 ORTHO05D007602 1.2e-22 110.5 86 59.3
ATR0124G011 Amborella trichopoda HOM05D006168 ORTHO05D007602 2.0e-22 109.8 86 62.8
TWI81G0790 Tripterygium wilfordii HOM05D006168 ORTHO05D007602 2.0e-22 109.8 104 56.7
HPP92_020852 Vanilla planifolia HOM05D006168 ORTHO05D007602 9.8e-22 107.5 81 66.7
unitig_21.g20432 Utricularia gibba HOM05D006168 ORTHO05D007602 1.7e-21 106.7 83 66.3
BcaC05g29992 Brassica carinata HOM05D006168 ORTHO05D007602 3.7e-21 105.5 86 74.4
Os06g0730800 Oryza sativa ssp. japonica HOM05D006168 ORTHO05D007602 1.8e-20 103.2 81 63.0
Pp3c19_22150 Physcomitrium patens HOM05D006168 ORTHO05D007602 9.1e-20 100.9 85 57.6
Zm00001eb228960 Zea mays HOM05D006168 ORTHO05D007602 9.1e-20 100.9 81 60.5
AagrBONN_evm.TU.Sc2ySwM_368.389 Anthoceros agrestis HOM05D006168 ORTHO05D007602 6.5e-18 94.7 81 54.3
Mapoly0133s0024 Marchantia polymorpha HOM05D006168 ORTHO05D007602 1.5e-17 93.6 85 51.8
Sed0015845 Sechium edule HOM05D006168 ORTHO05D007602 3.3e-17 92.4 70 68.6
arahy.Tifrunner.gnm1.ann1.52MA05 Arachis hypogaea HOM05D006168 ORTHO05D007602 5.5e-17 91.7 82 61.0
SMO147G0110 Selaginella moellendorffii HOM05D006168 ORTHO05D007602 9.5e-17 90.9 79 58.2
BcaB04g19282 Brassica carinata HOM05D006168 ORTHO05D007602 3.6e-16 89.0 73 67.1
Potri.017G154100 Populus trichocarpa HOM05D006168 ORTHO05D007602 3.6e-16 89.0 81 59.3
SalBow8G4549 Salvia bowleyana HOM05D006168 ORTHO05D007602 1.3e-13 80.5 79 54.4
RcHm_v2.0_Chr5g0006211 Rosa chinensis HOM05D006168 ORTHO05D007602 2.8e-13 79.3 87 46.0
CBR_g57849 Chara braunii HOM05D006168 ORTHO05D007602 4.9e-13 78.6 86 45.3
FvH4_3g03920 Fragaria vesca HOM05D006168 ORTHO05D007602 2.7e-11 72.8 88 44.3
FAN11G1802 Fragaria x ananassa HOM05D006168 ORTHO05D007602 2.7e-11 72.8 88 44.3
FAN16G2203 Fragaria x ananassa HOM05D006168 ORTHO05D007602 5.9e-11 71.6 88 44.3
FAN25G2877 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.0e-10 70.9 88 43.2
FAN21G2556 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.7e-10 70.1 88 43.2
Cre12.g518300 Chlamydomonas reinhardtii HOM05D006168 ORTHO05D007602 3.8e-10 68.9 82 46.3
TPR.G8871 Trifolium pratense HOM05D006168 ORTHO05D007602 5.0e-10 68.6 37 91.9
arahy.Tifrunner.gnm1.ann1.S1M3RU Arachis hypogaea HOM05D006168 ORTHO05D007602 9.5e-09 64.3 57 50.9
Sc15g0000010 Simmondsia chinensis HOM05D006168 ORTHO05D007602 1.6e-08 63.5 37 75.7
TPR.G35595 Trifolium pratense HOM05D006168 ORTHO05D007602 4.7e-08 62.0 36 72.2
BcaC01g04336 Brassica carinata HOM05D006168 ORTHO05D007602 3.0e-07 59.3 47 57.4
FAN13G0455 Fragaria x ananassa HOM05D006168 ORTHO05D007602 3.4e-06 55.8 38 60.5


User provided reference genes

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