Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000472g0230 Nicotiana tabacum HOM05D006127 ORTHO05D007465 1.6e-266 922.2 463 100.0
Nitab4.5_0001331g0020 Nicotiana tabacum HOM05D006127 ORTHO05D007465 4.7e-258 894.0 472 96.0
PGSC0003DMG400009503 Solanum tuberosum HOM05D006127 ORTHO05D007465 8.7e-252 873.2 463 93.7
Solyc03g007620.3 Solanum lycopersicum HOM05D006127 ORTHO05D007465 1.8e-249 865.5 463 92.7
Sopen03g003570 Solanum pennellii HOM05D006127 ORTHO05D007465 9.0e-249 863.2 463 92.4
Peaxi162Scf00444g00314 Petunia axillaris HOM05D006127 ORTHO05D007465 1.3e-247 859.4 463 93.1
CAN.G236.3 Capsicum annuum HOM05D006127 ORTHO05D007465 1.3e-242 842.8 461 91.3
Cfa016302 Carpinus fangiana HOM05D006127 ORTHO05D007465 4.4e-195 684.9 460 76.3
Dinv35267 Davidia involucrata HOM05D006127 ORTHO05D007465 4.4e-195 684.9 463 75.4
Prupe.2G302400 Prunus persica HOM05D006127 ORTHO05D007465 4.1e-193 678.3 463 76.2
COL.COLO4_30292 Corchorus olitorius HOM05D006127 ORTHO05D007465 4.5e-192 674.9 471 73.9
Gorai.003G069400 Gossypium raimondii HOM05D006127 ORTHO05D007465 5.0e-191 671.4 467 73.2
Gohir.D11G229300 Gossypium hirsutum HOM05D006127 ORTHO05D007465 6.5e-191 671.0 467 73.0
MD07G1280200 Malus domestica HOM05D006127 ORTHO05D007465 1.1e-190 670.2 463 73.7
CSS0002355 Camellia sinensis var. sinensis HOM05D006127 ORTHO05D007465 2.1e-189 666.0 461 74.8
Thecc.03G186000 Theobroma cacao HOM05D006127 ORTHO05D007465 4.7e-189 664.8 467 72.6
Gohir.A11G225200 Gossypium hirsutum HOM05D006127 ORTHO05D007465 1.4e-188 663.3 467 72.2
Ciclev10004691m.g Citrus clementina HOM05D006127 ORTHO05D007465 2.3e-188 662.5 458 73.8
Atru.chr1.338 Acer truncatum HOM05D006127 ORTHO05D007465 2.6e-187 659.1 469 71.6
QL09p012458 Quercus lobata HOM05D006127 ORTHO05D007465 2.6e-187 659.1 460 73.5
Manes.06G153500 Manihot esculenta HOM05D006127 ORTHO05D007465 3.4e-187 658.7 471 71.8
CSS0021566 Camellia sinensis var. sinensis HOM05D006127 ORTHO05D007465 2.2e-186 656.0 464 73.9
Actinidia34165 Actinidia chinensis HOM05D006127 ORTHO05D007465 9.1e-185 650.6 468 72.9
Dinv28380 Davidia involucrata HOM05D006127 ORTHO05D007465 5.9e-184 647.9 466 74.0
TAR374G0777 Trochodendron aralioides HOM05D006127 ORTHO05D007465 2.9e-183 645.6 467 70.4
Sabra17G0124200 Salix brachista HOM05D006127 ORTHO05D007465 3.8e-183 645.2 469 71.4
TWI23G0320 Tripterygium wilfordii HOM05D006127 ORTHO05D007465 6.5e-183 644.4 471 72.2
MD01G1210100 Malus domestica HOM05D006127 ORTHO05D007465 1.6e-181 639.8 448 72.5
Phvul.004G105900 Phaseolus vulgaris HOM05D006127 ORTHO05D007465 3.6e-181 638.6 455 70.3
Eucgr.A02719 Eucalyptus grandis HOM05D006127 ORTHO05D007465 6.1e-181 637.9 466 69.1
Potri.017G148900 Populus trichocarpa HOM05D006127 ORTHO05D007465 1.4e-180 636.7 466 70.6
MSTRG.8699 Avicennia marina HOM05D006127 ORTHO05D007465 1.8e-180 636.3 471 69.9
Cc02_g02250 Coffea canephora HOM05D006127 ORTHO05D007465 3.0e-180 635.6 432 73.4
Potri.004G072100 Populus trichocarpa HOM05D006127 ORTHO05D007465 3.0e-180 635.6 465 71.6
Glyma.09G129300 Glycine max HOM05D006127 ORTHO05D007465 1.2e-179 633.6 454 70.5
Lj2g0027649 Lotus japonicus HOM05D006127 ORTHO05D007465 2.6e-179 632.5 454 70.9
Lalb_Chr01g0009501 Lupinus albus HOM05D006127 ORTHO05D007465 2.6e-179 632.5 450 70.7
Ca_26803_v3 Cicer arietinum L. HOM05D006127 ORTHO05D007465 5.7e-179 631.3 475 68.4
THA.LOC104818243 Tarenaya hassleriana HOM05D006127 ORTHO05D007465 7.5e-179 630.9 465 69.7
PGR044G2596 Punica granatum HOM05D006127 ORTHO05D007465 3.7e-178 628.6 463 70.8
CsaV3_5G001020 Cucumis sativus L. HOM05D006127 ORTHO05D007465 1.1e-177 627.1 454 68.5
CiPaw.06G004100 Carya illinoinensis HOM05D006127 ORTHO05D007465 5.4e-177 624.8 456 72.6
Lj1A1007G54 Lonicera japonica HOM05D006127 ORTHO05D007465 1.0e-175 620.5 479 69.7
MELO3C005842.2 Cucumis melo HOM05D006127 ORTHO05D007465 6.6e-175 617.8 458 67.5
Carub.0008s2341 Capsella rubella HOM05D006127 ORTHO05D007465 8.6e-175 617.5 467 69.2
Thhalv10003967m.g Eutrema salsugineum HOM05D006127 ORTHO05D007465 1.9e-174 616.3 466 69.1
RcHm_v2.0_Chr1g0378611 Rosa chinensis HOM05D006127 ORTHO05D007465 2.5e-174 615.9 460 69.8
AT5G62650 Arabidopsis thaliana HOM05D006127 ORTHO05D007465 3.3e-174 615.5 467 69.6
ClCG01G000890 Citrullus lanatus HOM05D006127 ORTHO05D007465 5.6e-174 614.8 454 68.1
Migut.F00277 Erythranthe guttata HOM05D006127 ORTHO05D007465 2.1e-173 612.8 473 68.3
Sed0008008 Sechium edule HOM05D006127 ORTHO05D007465 3.6e-173 612.1 455 66.6
Lsat_1_v5_gn_9_56840 Lactuca sativa HOM05D006127 ORTHO05D007465 4.7e-173 611.7 460 68.7
ECA232G4568 Erigeron canadensis HOM05D006127 ORTHO05D007465 6.1e-173 611.3 461 68.1
Aa31LG11G990 Aethionema arabicum HOM05D006127 ORTHO05D007465 1.4e-172 610.1 469 68.9
AL8G39630 Arabidopsis lyrata HOM05D006127 ORTHO05D007465 1.8e-172 609.8 467 69.0
Gorai.006G199600 Gossypium raimondii HOM05D006127 ORTHO05D007465 1.8e-172 609.8 465 67.1
HanXRQChr00c0486g0575011 Helianthus annuus HOM05D006127 ORTHO05D007465 2.3e-172 609.4 470 66.6
Sp2g25830 Schrenkiella parvula HOM05D006127 ORTHO05D007465 6.8e-172 607.8 465 68.6
PSO266G0017 Papaver somniferum HOM05D006127 ORTHO05D007465 1.5e-171 606.7 463 67.0
CARHR276460 Cardamine hirsuta HOM05D006127 ORTHO05D007465 2.0e-171 606.3 462 68.6
CiPaw.05G261300 Carya illinoinensis HOM05D006127 ORTHO05D007465 2.6e-171 605.9 431 71.5
PSO478G4852 Papaver somniferum HOM05D006127 ORTHO05D007465 2.6e-171 605.9 462 66.2
Gohir.D09G177600 Gossypium hirsutum HOM05D006127 ORTHO05D007465 2.9e-170 602.4 465 66.2
Sabra04G0047500 Salix brachista HOM05D006127 ORTHO05D007465 2.9e-170 602.4 516 64.0
Medtr6g053110 Medicago truncatula HOM05D006127 ORTHO05D007465 3.2e-169 599.0 464 66.8
Sc13g0009280 Simmondsia chinensis HOM05D006127 ORTHO05D007465 7.0e-169 597.8 470 66.4
Haze_00059 Corylus avellana HOM05D006127 ORTHO05D007465 2.0e-168 596.3 460 69.1
FAN06G1782 Fragaria x ananassa HOM05D006127 ORTHO05D007465 2.0e-168 596.3 455 68.4
A06p29390 Brassica napus HOM05D006127 ORTHO05D007465 2.7e-168 595.9 460 68.3
FAN06G3350 Fragaria x ananassa HOM05D006127 ORTHO05D007465 4.6e-168 595.1 454 67.8
FAN03G3352 Fragaria x ananassa HOM05D006127 ORTHO05D007465 5.9e-168 594.7 456 68.6
FAN10G0315 Fragaria x ananassa HOM05D006127 ORTHO05D007465 1.0e-167 594.0 454 67.6
FAN03G2078 Fragaria x ananassa HOM05D006127 ORTHO05D007465 1.3e-167 593.6 456 68.4
FAN10G2357 Fragaria x ananassa HOM05D006127 ORTHO05D007465 1.3e-167 593.6 454 67.8
BraA06t25889Z Brassica rapa HOM05D006127 ORTHO05D007465 1.7e-167 593.2 461 68.1
BcaC01g02503 Brassica carinata HOM05D006127 ORTHO05D007465 3.0e-167 592.4 461 68.1
arahy.Tifrunner.gnm1.ann1.HXNP43 Arachis hypogaea HOM05D006127 ORTHO05D007465 1.1e-166 590.5 464 66.6
Gohir.A09G182900 Gossypium hirsutum HOM05D006127 ORTHO05D007465 1.9e-166 589.7 449 66.8
DCAR_008898 Daucus carota HOM05D006127 ORTHO05D007465 2.5e-166 589.3 467 65.1
C03p64120 Brassica napus HOM05D006127 ORTHO05D007465 3.3e-166 589.0 461 67.9
BolC3t18667H Brassica oleracea HOM05D006127 ORTHO05D007465 3.3e-166 589.0 461 67.9
arahy.Tifrunner.gnm1.ann1.AR9FJK Arachis hypogaea HOM05D006127 ORTHO05D007465 2.8e-165 585.9 472 65.7
Aqoxy7G00200 Aquilegia oxysepala HOM05D006127 ORTHO05D007465 3.1e-164 582.4 446 67.7
HanXRQChr15g0494171 Helianthus annuus HOM05D006127 ORTHO05D007465 7.5e-163 577.8 456 64.9
BcaB02g09667 Brassica carinata HOM05D006127 ORTHO05D007465 1.3e-162 577.0 459 66.7
unitig_747.g21859 Utricularia gibba HOM05D006127 ORTHO05D007465 2.2e-162 576.2 467 65.5
Nn6g32416 Nelumbo nucifera HOM05D006127 ORTHO05D007465 8.3e-162 574.3 473 64.5
Glyma.16G177100 Glycine max HOM05D006127 ORTHO05D007465 1.1e-161 573.9 449 65.7
EL10Ac3g05405 Beta vulgaris HOM05D006127 ORTHO05D007465 1.6e-157 560.1 476 63.7
AUR62031438 Chenopodium quinoa HOM05D006127 ORTHO05D007465 3.6e-157 558.9 463 63.9
SGA_v2.0_scaffold60G21123 Striga asiatica HOM05D006127 ORTHO05D007465 6.8e-156 554.7 474 63.9
Oeu003330.1 Olea europaea HOM05D006127 ORTHO05D007465 1.9e-153 546.6 415 67.5
Cpa.g.sc107.127 Carica papaya HOM05D006127 ORTHO05D007465 9.2e-153 544.3 367 74.1
GSVIVG01028824001 Vitis vinifera HOM05D006127 ORTHO05D007465 1.3e-151 540.4 434 64.1
Ah.07g206460 Amaranthus hybridus HOM05D006127 ORTHO05D007465 5.6e-150 535.0 459 61.9
ATR0721G168 Amborella trichopoda HOM05D006127 ORTHO05D007465 1.7e-146 523.5 449 59.7
Rhsim03G0192200 Rhododendron simsii HOM05D006127 ORTHO05D007465 9.2e-145 517.7 470 61.1
vmacro06616 Vaccinium macrocarpon HOM05D006127 ORTHO05D007465 1.6e-144 516.9 464 61.9
Hund04798 Selenicereus undatus HOM05D006127 ORTHO05D007465 2.7e-144 516.2 590 50.8
CDE04G3725 Ceratophyllum demersum HOM05D006127 ORTHO05D007465 3.9e-143 512.3 461 57.5
Zm00001eb119480 Zea mays HOM05D006127 ORTHO05D007465 3.1e-140 502.7 443 59.1
TPR.G9177 Trifolium pratense HOM05D006127 ORTHO05D007465 4.0e-140 502.3 287 85.4
HPP92_008801 Vanilla planifolia HOM05D006127 ORTHO05D007465 5.2e-140 501.9 464 55.4
Psat0s2186g0040 Pisum sativum HOM05D006127 ORTHO05D007465 8.4e-138 494.6 311 79.1
Ah.13g069260 Amaranthus hybridus HOM05D006127 ORTHO05D007465 7.1e-137 491.5 412 62.6
FvH4_7g30450 Fragaria vesca HOM05D006127 ORTHO05D007465 1.3e-135 487.3 294 81.3
AUR62021102 Chenopodium quinoa HOM05D006127 ORTHO05D007465 6.6e-135 485.0 467 58.5
Oeu027861.1 Olea europaea HOM05D006127 ORTHO05D007465 1.9e-110 403.7 423 54.6
VMungo0464G0768 Vigna mungo HOM05D006127 ORTHO05D007465 4.8e-109 399.1 221 86.9
HPP92_005266 Vanilla planifolia HOM05D006127 ORTHO05D007465 5.9e-107 392.1 369 56.1
BcaB02g09671 Brassica carinata HOM05D006127 ORTHO05D007465 2.7e-104 383.3 464 52.4
Nn1g01683 Nelumbo nucifera HOM05D006127 ORTHO05D007465 1.2e-99 367.9 474 47.3
SGA_v2.0_scaffold192G40622 Striga asiatica HOM05D006127 ORTHO05D007465 2.0e-94 350.5 259 69.9
CDE03G0317 Ceratophyllum demersum HOM05D006127 ORTHO05D007465 5.9e-91 339.0 273 59.7
FAN01G1207 Fragaria x ananassa HOM05D006127 ORTHO05D007465 5.5e-73 279.3 171 80.7
Os01g0225300 Oryza sativa ssp. japonica HOM05D006127 ORTHO05D007465 2.2e-69 267.3 283 52.3
Mapoly0009s0032 Marchantia polymorpha HOM05D006127 ORTHO05D007465 1.8e-68 264.2 486 35.2
AagrBONN_evm.TU.Sc2ySwM_368.2100 Anthoceros agrestis HOM05D006127 ORTHO05D007465 1.7e-66 257.7 290 46.2
Pp3c17_22580 Physcomitrium patens HOM05D006127 ORTHO05D007465 1.3e-53 214.9 286 38.5
arahy.Tifrunner.gnm1.ann1.KML1I1 Arachis hypogaea HOM05D006127 ORTHO05D007465 2.2e-45 187.6 247 45.7
SEGI_03634 Sequoiadendron giganteum HOM05D006127 ORTHO05D007465 7.1e-36 156.0 156 48.1
AL8G39600 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.6e-35 153.3 95 78.9
Cfa002216 Carpinus fangiana HOM05D006127 ORTHO05D007465 7.8e-35 152.5 238 42.0
SMO266G0103 Selaginella moellendorffii HOM05D006127 ORTHO05D007465 8.1e-32 142.5 202 34.7
TPR.G27774 Trifolium pratense HOM05D006127 ORTHO05D007465 1.9e-28 131.3 170 44.7
TPR.G9175 Trifolium pratense HOM05D006127 ORTHO05D007465 8.6e-26 122.5 80 71.2
COL.COLO4_36023 Corchorus olitorius HOM05D006127 ORTHO05D161883 1.1e-23 115.5 62 83.9
SEGI_25179 Sequoiadendron giganteum HOM05D006127 ORTHO05D007465 2.3e-18 97.8 82 57.3
Ah.13g069250 Amaranthus hybridus HOM05D006127 ORTHO05D007465 1.8e-15 88.2 61 73.8


User provided reference genes

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