Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000471g0140 Nicotiana tabacum HOM05D007384 ORTHO05D008511 8.9e-47 190.7 159 100.0
Peaxi162Scf00323g00037 Petunia axillaris HOM05D007384 ORTHO05D008511 6.8e-39 164.5 159 65.4
PGSC0003DMG400012958 Solanum tuberosum HOM05D007384 ORTHO05D008511 8.6e-34 147.5 159 52.2
Sopen04g023570 Solanum pennellii HOM05D007384 ORTHO05D008511 1.5e-33 146.7 159 57.9
Solyc04g053145.1 Solanum lycopersicum HOM05D007384 ORTHO05D008511 2.1e-32 142.9 159 56.6
Oeu028378.1 Olea europaea HOM05D007384 ORTHO05D008511 1.5e-14 83.6 161 39.8
Oeu028376.1 Olea europaea HOM05D007384 ORTHO05D008511 4.4e-14 82.0 161 39.1
Oeu056489.1 Olea europaea HOM05D007384 ORTHO05D008511 7.6e-14 81.3 159 33.3
Lsat_1_v5_gn_2_65360 Lactuca sativa HOM05D007384 ORTHO05D008511 9.9e-14 80.9 160 32.5
MSTRG.23314 Avicennia marina HOM05D007384 ORTHO05D008511 2.9e-13 79.3 159 30.8
Dinv19495 Davidia involucrata HOM05D007384 ORTHO05D008511 2.9e-13 79.3 168 32.7
Dinv42700 Davidia involucrata HOM05D007384 ORTHO05D008511 3.2e-12 75.9 169 29.6
DCAR_001367 Daucus carota HOM05D007384 ORTHO05D008511 4.2e-12 75.5 157 47.1
Oeu056487.1 Olea europaea HOM05D007384 ORTHO05D008511 1.2e-11 73.9 157 31.8
Cc07_g16090 Coffea canephora HOM05D007384 ORTHO05D008511 2.7e-11 72.8 159 29.6
SGA_v2.0_scaffold47G17711 Striga asiatica HOM05D007384 ORTHO05D008511 2.7e-11 72.8 159 43.4
SGA_v2.0_scaffold2G01297 Striga asiatica HOM05D007384 ORTHO05D008511 6.0e-11 71.6 160 43.8
CSS0019294 Camellia sinensis var. sinensis HOM05D007384 ORTHO05D008511 1.3e-10 70.5 76 48.7
Rhsim10G0013800 Rhododendron simsii HOM05D007384 ORTHO05D008511 1.3e-10 70.5 159 48.4
TWI77G0698 Tripterygium wilfordii HOM05D007384 ORTHO05D008511 2.3e-10 69.7 162 30.9
HanXRQChr10g0295241 Helianthus annuus HOM05D007384 ORTHO05D008511 3.0e-10 69.3 161 31.7
MSTRG.2538 Avicennia marina HOM05D007384 ORTHO05D008511 1.1e-09 67.4 159 46.5
EL10Ac6g14748 Beta vulgaris HOM05D007384 ORTHO05D008511 1.5e-09 67.0 165 27.3
Oeu028527.1 Olea europaea HOM05D007384 ORTHO05D008511 1.9e-09 66.6 159 35.8
SalBow6G3892 Salvia bowleyana HOM05D007384 ORTHO05D008511 1.9e-09 66.6 159 49.1
Thecc.01G112100 Theobroma cacao HOM05D007384 ORTHO05D008511 4.3e-09 65.5 161 26.7
ECA238G3631 Erigeron canadensis HOM05D007384 ORTHO05D008511 7.3e-09 64.7 77 46.8
Hund19659 Selenicereus undatus HOM05D007384 ORTHO05D008511 2.1e-08 63.2 162 27.8
SalBow5G4202 Salvia bowleyana HOM05D007384 ORTHO05D008511 3.6e-08 62.4 159 27.7
Phvul.002G264500 Phaseolus vulgaris HOM05D007384 ORTHO05D008511 4.8e-08 62.0 156 46.2
SalBow5G0260 Salvia bowleyana HOM05D007384 ORTHO05D008511 4.8e-08 62.0 158 27.2
FvH4_1g22200 Fragaria vesca HOM05D007384 ORTHO05D008511 6.2e-08 61.6 156 33.3
Migut.L00076 Erythranthe guttata HOM05D007384 ORTHO05D008511 8.1e-08 61.2 159 52.2
Glyma.08G141200 Glycine max HOM05D007384 ORTHO05D008511 8.1e-08 61.2 160 28.8
FAN19G0612 Fragaria x ananassa HOM05D007384 ORTHO05D008511 1.1e-07 60.8 156 32.7
Gorai.003G046900 Gossypium raimondii HOM05D007384 ORTHO05D008511 1.1e-07 60.8 153 38.6
Rhsim08G0006700 Rhododendron simsii HOM05D007384 ORTHO05D008511 1.8e-07 60.1 173 42.2
FAN23G2853 Fragaria x ananassa HOM05D007384 ORTHO05D008511 3.1e-07 59.3 156 32.1
RcHm_v2.0_Chr2g0116341 Rosa chinensis HOM05D007384 ORTHO05D008511 4.0e-07 58.9 156 34.0
Duzib187G0804 Durio zibethinus HOM05D007384 ORTHO05D008511 6.9e-07 58.2 149 28.9
VMungo0251G1085 Vigna mungo HOM05D007384 ORTHO05D008511 6.9e-07 58.2 154 31.8
FAN26G2489 Fragaria x ananassa HOM05D007384 ORTHO05D008511 1.2e-06 57.4 156 32.1
Lj4g0022190 Lotus japonicus HOM05D007384 ORTHO05D008511 2.0e-06 56.6 162 33.3
Lj4g0025402 Lotus japonicus HOM05D007384 ORTHO05D008511 2.0e-06 56.6 162 33.3
TWI74G0307 Tripterygium wilfordii HOM05D007384 ORTHO05D008511 3.4e-06 55.8 165 41.2
Hund03542 Selenicereus undatus HOM05D007384 ORTHO05D008511 4.5e-06 55.5 162 24.7
TAR628G0188 Trochodendron aralioides HOM05D007384 ORTHO05D008511 5.8e-06 55.1 170 24.1
CANSAT01G1949 Cannabis sativa HOM05D007384 ORTHO05D008511 7.6e-06 54.7 154 38.3
CiPaw.03G134700 Carya illinoinensis HOM05D007384 ORTHO05D008511 9.9e-06 54.3 165 27.3


User provided reference genes

Program Settings