Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000468g0260 Nicotiana tabacum HOM05D000391 ORTHO05D000293 1.8e-94 349.4 195 100.0
Nitab4.5_0006785g0010 Nicotiana tabacum HOM05D000391 ORTHO05D000293 3.4e-40 169.1 217 58.5
Peaxi162Scf01260g00018 Petunia axillaris HOM05D000391 ORTHO05D000293 7.8e-37 157.9 210 57.1
CAN.G1249.15 Capsicum annuum HOM05D000391 ORTHO05D000293 2.2e-31 139.8 222 46.4
Oeu015681.1 Olea europaea HOM05D000391 ORTHO05D000293 1.8e-20 103.6 211 39.3
Nitab4.5_0005582g0030 Nicotiana tabacum HOM05D000391 ORTHO05D000293 5.1e-20 102.1 217 36.9
Nitab4.5_0005059g0060 Nicotiana tabacum HOM05D000391 ORTHO05D000293 6.7e-20 101.7 210 36.2
Nitab4.5_0005729g0030 Nicotiana tabacum HOM05D000391 ORTHO05D000293 1.5e-19 100.5 210 35.7
Nitab4.5_0005059g0050 Nicotiana tabacum HOM05D000391 ORTHO05D000293 3.3e-19 99.4 206 37.4
CAN.G134.114 Capsicum annuum HOM05D000391 ORTHO05D000293 2.8e-18 96.3 222 34.7
Peaxi162Scf00282g00014 Petunia axillaris HOM05D000391 ORTHO05D000293 2.8e-18 96.3 209 36.4
Sopen01g041180 Solanum pennellii HOM05D000391 ORTHO05D000293 4.8e-18 95.5 222 34.7
PGSC0003DMG400019446 Solanum tuberosum HOM05D000391 ORTHO05D000293 8.1e-18 94.7 222 34.7
Lj7C580G4 Lonicera japonica HOM05D000391 ORTHO05D000293 3.1e-17 92.8 205 34.6
GSVIVG01000829001 Vitis vinifera HOM05D000391 ORTHO05D000293 4.0e-17 92.4 217 35.0
CAN.G134.115 Capsicum annuum HOM05D000391 ORTHO05D000293 9.0e-17 91.3 174 38.5
CAN.G134.117 Capsicum annuum HOM05D000391 ORTHO05D000293 9.0e-17 91.3 201 34.8
Solyc01g097550.4 Solanum lycopersicum HOM05D000391 ORTHO05D000293 9.0e-17 91.3 212 35.8
Sopen01g041200 Solanum pennellii HOM05D000391 ORTHO05D000293 1.2e-16 90.9 212 35.4
Prupe.2G031800 Prunus persica HOM05D000391 ORTHO05D000293 2.6e-16 89.7 200 33.0
MBI11_g29017_MAGBIO Magnolia biondii HOM05D000391 ORTHO05D000293 3.4e-16 89.4 185 35.1
Nn2g14906 Nelumbo nucifera HOM05D000391 ORTHO05D000293 1.9e-14 83.6 195 33.3
MSTRG.20527 Avicennia marina HOM05D000391 ORTHO05D000293 3.2e-14 82.8 202 33.2
ClCG05G026670 Citrullus lanatus HOM05D000391 ORTHO05D000293 3.2e-14 82.8 163 35.6
DCAR_031827 Daucus carota HOM05D000391 ORTHO05D000293 3.2e-14 82.8 207 34.8
CiPaw.13G011900 Carya illinoinensis HOM05D000391 ORTHO05D000293 4.2e-14 82.4 207 33.3
Migut.B01213 Erythranthe guttata HOM05D000391 ORTHO05D000293 4.2e-14 82.4 206 31.6
MD07G1035400 Malus domestica HOM05D000391 ORTHO05D000293 5.5e-14 82.0 201 34.3
Nn7g36606 Nelumbo nucifera HOM05D000391 ORTHO05D000293 5.5e-14 82.0 195 32.8
PGR031G2969 Punica granatum HOM05D000391 ORTHO05D000293 7.1e-14 81.6 201 33.8
Psat4g146960 Pisum sativum HOM05D000391 ORTHO05D000293 2.7e-13 79.7 203 32.0
Rhsim07G0065200 Rhododendron simsii HOM05D000391 ORTHO05D000293 2.7e-13 79.7 207 32.9
MBI19_g24724_MAGBIO Magnolia biondii HOM05D000391 ORTHO05D000293 3.5e-13 79.3 202 31.7
vmacro13741 Vaccinium macrocarpon HOM05D000391 ORTHO05D000293 3.5e-13 79.3 207 32.9
Lj3g0012018 Lotus japonicus HOM05D000391 ORTHO05D000293 4.6e-13 79.0 203 32.5
Manes.04G165200 Manihot esculenta HOM05D000391 ORTHO05D000293 4.6e-13 79.0 203 33.0
Medtr8g038170 Medicago truncatula HOM05D000391 ORTHO05D000293 6.0e-13 78.6 203 32.5
Actinidia06258 Actinidia chinensis HOM05D000391 ORTHO05D000293 7.9e-13 78.2 165 37.0
ECA248G3308 Erigeron canadensis HOM05D000006 ORTHO05D000091 1.0e-12 77.8 176 34.1
TPR.G9109 Trifolium pratense HOM05D000391 ORTHO05D000293 1.0e-12 77.8 203 33.0
Duzib128G0285 Durio zibethinus HOM05D000391 ORTHO05D000293 1.3e-12 77.4 165 37.0
vmacro13737 Vaccinium macrocarpon HOM05D000391 ORTHO05D000293 1.3e-12 77.4 205 32.7
Ca_23918_v3 Cicer arietinum L. HOM05D000391 ORTHO05D000293 1.8e-12 77.0 203 32.0
Ciclev10032182m.g Citrus clementina HOM05D000391 ORTHO05D000293 2.3e-12 76.6 199 32.7
CsaV3_5G036600 Cucumis sativus L. HOM05D000391 ORTHO05D000293 2.3e-12 76.6 178 33.1
Cc00_g03120 Coffea canephora HOM05D000391 ORTHO05D000293 3.0e-12 76.3 163 35.6
Gohir.D05G282600 Gossypium hirsutum HOM05D000391 ORTHO05D000293 3.0e-12 76.3 172 34.3
Gorai.009G296000 Gossypium raimondii HOM05D000391 ORTHO05D000293 3.0e-12 76.3 172 34.3
Atru.chr11.2429 Acer truncatum HOM05D000391 ORTHO05D000293 3.9e-12 75.9 212 33.0
PSO339G0116 Papaver somniferum HOM05D000391 ORTHO05D000293 3.9e-12 75.9 200 31.0
Actinidia06262 Actinidia chinensis HOM05D000391 ORTHO05D000293 5.1e-12 75.5 216 32.9
Lsat_1_v5_gn_8_114280 Lactuca sativa HOM05D000391 ORTHO05D000293 5.1e-12 75.5 176 34.1
Rhsim07G0064800 Rhododendron simsii HOM05D000391 ORTHO05D000293 5.1e-12 75.5 163 35.6
Potri.001G024900 Populus trichocarpa HOM05D000391 ORTHO05D000293 6.7e-12 75.1 166 36.1
MELO3C012456.2 Cucumis melo HOM05D000391 ORTHO05D000293 8.7e-12 74.7 178 32.6
Glyma.13G200000 Glycine max HOM05D000391 ORTHO05D000293 1.1e-11 74.3 203 31.0
Haze_03065 Corylus avellana HOM05D000391 ORTHO05D000293 1.5e-11 73.9 199 32.2
MD02G1291200 Malus domestica HOM05D000391 ORTHO05D000293 1.5e-11 73.9 199 31.2
PSO384G4001 Papaver somniferum HOM05D000391 ORTHO05D000293 1.9e-11 73.6 200 30.5
Sabra01G0018600 Salix brachista HOM05D000391 ORTHO05D000293 1.9e-11 73.6 166 36.1
VMungo1127G0995 Vigna mungo HOM05D000391 ORTHO05D000293 1.9e-11 73.6 207 30.0
Lalb_Chr01g0007931 Lupinus albus HOM05D000391 ORTHO05D000293 3.3e-11 72.8 165 33.3
Phvul.011G209400 Phaseolus vulgaris HOM05D000391 ORTHO05D000293 3.3e-11 72.8 207 30.0
QL04p014202 Quercus lobata HOM05D000391 ORTHO05D000293 3.3e-11 72.8 201 31.3
CSS0030559 Camellia sinensis var. sinensis HOM05D000391 ORTHO05D000293 4.3e-11 72.4 216 32.4
Glyma.15G238400 Glycine max HOM05D000391 ORTHO05D000293 5.6e-11 72.0 203 31.0
Sc10g0004320 Simmondsia chinensis HOM05D000391 ORTHO05D000293 7.4e-11 71.6 163 34.4
FvH4_7g02660 Fragaria vesca HOM05D000391 ORTHO05D000293 9.6e-11 71.2 165 34.5
FAN06G2403 Fragaria x ananassa HOM05D000391 ORTHO05D000293 9.6e-11 71.2 165 34.5
Thecc.10G169500 Theobroma cacao HOM05D000391 ORTHO05D000293 9.6e-11 71.2 175 36.0
Manes.11G003800 Manihot esculenta HOM05D000391 ORTHO05D000293 1.6e-10 70.5 200 34.5
vmacro22976 Vaccinium macrocarpon HOM05D000391 ORTHO05D000293 1.6e-10 70.5 252 29.8
RcHm_v2.0_Chr1g0321341 Rosa chinensis HOM05D000391 ORTHO05D000293 2.1e-10 70.1 201 31.8
FAN10G3361 Fragaria x ananassa HOM05D000391 ORTHO05D000293 2.8e-10 69.7 165 33.9
unitig_26.g8820 Utricularia gibba HOM05D000391 ORTHO05D000293 2.8e-10 69.7 175 29.7
EL10Ac2g02832 Beta vulgaris HOM05D000391 ORTHO05D000293 3.7e-10 69.3 204 32.4
Hund13340 Selenicereus undatus HOM05D000391 ORTHO05D000293 4.8e-10 68.9 198 31.8
arahy.Tifrunner.gnm1.ann1.39EPPD Arachis hypogaea HOM05D000391 ORTHO05D000293 6.2e-10 68.6 207 30.0
FAN01G0481 Fragaria x ananassa HOM05D000391 ORTHO05D000293 8.2e-10 68.2 165 33.9
FAN03G1387 Fragaria x ananassa HOM05D000391 ORTHO05D000293 8.2e-10 68.2 201 30.8
Actinidia19451 Actinidia chinensis HOM05D000391 ORTHO05D000293 1.4e-09 67.4 166 37.3
Sed0022417 Sechium edule HOM05D000391 ORTHO05D000293 1.4e-09 67.4 168 32.7
Actinidia19456 Actinidia chinensis HOM05D000391 ORTHO05D000293 1.8e-09 67.0 166 33.7
arahy.Tifrunner.gnm1.ann1.D79IFD Arachis hypogaea HOM05D000391 ORTHO05D000293 3.1e-09 66.2 202 28.2
Eucgr.G03249 Eucalyptus grandis HOM05D000391 ORTHO05D000293 3.1e-09 66.2 164 32.3
Sed0027337 Sechium edule HOM05D000391 ORTHO05D000293 9.0e-09 64.7 157 33.8
Dinv32039 Davidia involucrata HOM05D000391 ORTHO05D000293 1.5e-08 63.9 81 44.4
Actinidia19454 Actinidia chinensis HOM05D000391 ORTHO05D000293 2.0e-08 63.5 205 29.3
Actinidia19452 Actinidia chinensis HOM05D000391 ORTHO05D000293 4.5e-08 62.4 133 36.8
Gohir.D05G282500 Gossypium hirsutum HOM05D000391 ORTHO05D000293 7.6e-08 61.6 171 31.6
THA.LOC104824186 Tarenaya hassleriana HOM05D000391 ORTHO05D000293 1.0e-07 61.2 163 31.3
Gorai.009G295900 Gossypium raimondii HOM05D000391 ORTHO05D000293 1.3e-07 60.8 171 32.2
Ah.10g030700 Amaranthus hybridus HOM05D000391 ORTHO05D000293 2.2e-07 60.1 209 29.2
Duzib106G0375 Durio zibethinus HOM05D000391 ORTHO05D000293 4.9e-07 58.9 201 29.9
AUR62026841 Chenopodium quinoa HOM05D000391 ORTHO05D000293 6.5e-07 58.5 206 29.1
SHI37244 Sapria himalayana HOM05D000391 ORTHO05D000293 8.4e-07 58.2 195 30.8
Aqoxy1G00341 Aquilegia oxysepala HOM05D000391 ORTHO05D000293 1.4e-06 57.4 202 30.2
Sp4g21110 Schrenkiella parvula HOM05D000391 ORTHO05D000293 1.4e-06 57.4 163 30.7
CANSAT56G1327 Cannabis sativa HOM05D000391 ORTHO05D000293 1.9e-06 57.0 176 26.7
AUR62037212 Chenopodium quinoa HOM05D000391 ORTHO05D000293 3.2e-06 56.2 164 30.5
Gohir.A05G280600 Gossypium hirsutum HOM05D000391 ORTHO05D000293 3.2e-06 56.2 165 30.9
COL.COLO4_35435 Corchorus olitorius HOM05D000391 ORTHO05D000293 4.2e-06 55.8 202 27.2
Cc00_g03150 Coffea canephora HOM05D000391 ORTHO05D000293 7.1e-06 55.1 39 69.2


User provided reference genes

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