Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000467g0140 Nicotiana tabacum HOM05D006374 ORTHO05D006349 4.1e-131 471.5 253 100.0
Nitab4.5_0004577g0040 Nicotiana tabacum HOM05D006374 ORTHO05D006349 4.5e-85 318.5 194 91.8
CAN.G328.5 Capsicum annuum HOM05D006374 ORTHO05D006349 1.5e-64 250.4 206 73.3
PGSC0003DMG401023161 Solanum tuberosum HOM05D006374 ORTHO05D006349 2.1e-58 229.9 240 63.8
Sopen02g012480 Solanum pennellii HOM05D006374 ORTHO05D006349 9.5e-51 204.5 274 54.4
Dinv11161 Davidia involucrata HOM05D006374 ORTHO05D006349 2.7e-29 133.3 99 65.7
CSS0045232 Camellia sinensis var. sinensis HOM05D006374 ORTHO05D006349 1.9e-27 127.1 99 62.6
Haze_07271 Corylus avellana HOM05D006374 ORTHO05D006349 7.3e-27 125.2 116 56.9
Cfa018891 Carpinus fangiana HOM05D006374 ORTHO05D006349 9.5e-27 124.8 119 55.5
Actinidia33103 Actinidia chinensis HOM05D006374 ORTHO05D006349 1.2e-26 124.4 99 61.6
GSVIVG01007539001 Vitis vinifera HOM05D006374 ORTHO05D006349 1.2e-26 124.4 104 60.6
Rhsim08G0189000 Rhododendron simsii HOM05D006374 ORTHO05D006349 2.1e-26 123.6 113 57.5
CiPaw.11G012000 Carya illinoinensis HOM05D006374 ORTHO05D006349 3.6e-26 122.9 113 55.8
Phvul.009G168700 Phaseolus vulgaris HOM05D006374 ORTHO05D006349 3.6e-26 122.9 102 62.7
Atru.chr9.1014 Acer truncatum HOM05D006374 ORTHO05D006349 4.7e-26 122.5 116 54.3
TWI39G0161 Tripterygium wilfordii HOM05D006374 ORTHO05D006349 4.7e-26 122.5 112 57.1
ClCG03G003510 Citrullus lanatus HOM05D006374 ORTHO05D006349 6.2e-26 122.1 100 60.0
TAR374G0798 Trochodendron aralioides HOM05D006374 ORTHO05D006349 6.2e-26 122.1 99 59.6
QL10p005050 Quercus lobata HOM05D006374 ORTHO05D006349 8.1e-26 121.7 113 56.6
Manes.14G055266 Manihot esculenta HOM05D006374 ORTHO05D006349 1.4e-25 120.9 113 56.6
FAN13G0453 Fragaria x ananassa HOM05D006374 ORTHO05D006349 2.3e-25 120.2 99 60.6
Migut.B01731 Erythranthe guttata HOM05D006374 ORTHO05D006349 5.2e-25 119.0 186 44.1
FvH4_5g07530 Fragaria vesca HOM05D006374 ORTHO05D006349 5.2e-25 119.0 99 59.6
FAN18G3707 Fragaria x ananassa HOM05D006374 ORTHO05D006349 5.2e-25 119.0 99 59.6
Medtr3g075090 Medicago truncatula HOM05D006374 ORTHO05D006349 5.2e-25 119.0 128 50.8
FAN08G0738 Fragaria x ananassa HOM05D006374 ORTHO05D006349 6.8e-25 118.6 99 59.6
RcHm_v2.0_Chr7g0191071 Rosa chinensis HOM05D006374 ORTHO05D006349 6.8e-25 118.6 110 57.3
Sabra10G0138300 Salix brachista HOM05D006374 ORTHO05D006349 8.9e-25 118.2 122 54.9
FvH4_3g25530 Fragaria vesca HOM05D006374 ORTHO05D006349 1.2e-24 117.9 118 54.2
FAN11G0071 Fragaria x ananassa HOM05D006374 ORTHO05D006349 1.2e-24 117.9 118 54.2
FAN25G0911 Fragaria x ananassa HOM05D006374 ORTHO05D006349 1.2e-24 117.9 118 53.4
MELO3C002334.2 Cucumis melo HOM05D006374 ORTHO05D006349 2.0e-24 117.1 113 54.9
CsaV3_1G009310 Cucumis sativus L. HOM05D006374 ORTHO05D006349 2.0e-24 117.1 113 54.9
Psat5g141920 Pisum sativum HOM05D006374 ORTHO05D006349 2.0e-24 117.1 121 53.7
PGSC0003DMG400027413 Solanum tuberosum HOM05D006374 ORTHO05D006349 5.8e-24 115.5 119 52.9
SGA_v2.0_scaffold277G46663 Striga asiatica HOM05D006374 ORTHO05D006349 5.8e-24 115.5 110 55.5
Cc03_g12860 Coffea canephora HOM05D006374 ORTHO05D006349 7.5e-24 115.2 119 52.1
Lj1g0028093 Lotus japonicus HOM05D006374 ORTHO05D006349 9.9e-24 114.8 98 60.2
Solyc11g072220.2 Solanum lycopersicum HOM05D006374 ORTHO05D006349 9.9e-24 114.8 119 52.9
Gorai.001G059300 Gossypium raimondii HOM05D006374 ORTHO05D006349 1.3e-23 114.4 118 50.8
Nn4g22459 Nelumbo nucifera HOM05D006374 ORTHO05D006349 1.3e-23 114.4 103 59.2
Potri.010G180300 Populus trichocarpa HOM05D006374 ORTHO05D006349 1.3e-23 114.4 122 53.3
Potri.015G090800 Populus trichocarpa HOM05D006374 ORTHO05D006349 1.3e-23 114.4 98 58.2
Prupe.5G156800 Prunus persica HOM05D006374 ORTHO05D006349 1.7e-23 114.0 110 54.5
Eucgr.B00120 Eucalyptus grandis HOM05D006374 ORTHO05D006349 2.2e-23 113.6 128 51.6
Sopen11g029890 Solanum pennellii HOM05D006374 ORTHO05D006349 2.2e-23 113.6 116 52.6
Ca_16088_v3 Cicer arietinum L. HOM05D006374 ORTHO05D006349 2.9e-23 113.2 129 51.9
Sc16g0003540 Simmondsia chinensis HOM05D006374 ORTHO05D006349 2.9e-23 113.2 130 46.9
Thecc.03G123000 Theobroma cacao HOM05D006374 ORTHO05D006349 4.9e-23 112.5 102 51.0
Ciclev10021330m.g Citrus clementina HOM05D006374 ORTHO05D006349 6.4e-23 112.1 118 52.5
Sed0019471 Sechium edule HOM05D006374 ORTHO05D006349 6.4e-23 112.1 100 55.0
VMungo1309G0655 Vigna mungo HOM05D006374 ORTHO05D006349 6.4e-23 112.1 102 58.8
TWI63G0087 Tripterygium wilfordii HOM05D006374 ORTHO05D006349 8.3e-23 111.7 124 49.2
AUR62041397 Chenopodium quinoa HOM05D006374 ORTHO05D006349 1.1e-22 111.3 102 55.9
Gohir.A13G202800 Gossypium hirsutum HOM05D006374 ORTHO05D006349 1.4e-22 110.9 110 52.7
Lsat_1_v5_gn_4_76860 Lactuca sativa HOM05D006374 ORTHO05D006349 1.4e-22 110.9 125 50.4
ATR0824G075 Amborella trichopoda HOM05D001292 ORTHO05D006349 2.4e-22 110.2 120 49.2
Peaxi162Scf00234g00413 Petunia axillaris HOM05D006374 ORTHO05D006349 2.4e-22 110.2 130 49.2
SEGI_20117 Sequoiadendron giganteum HOM05D001292 ORTHO05D006349 2.4e-22 110.2 110 50.9
COL.COLO4_28091 Corchorus olitorius HOM05D001045 ORTHO05D001542 3.2e-22 109.8 126 49.2
Duzib205G1366 Durio zibethinus HOM05D006374 ORTHO05D006349 3.2e-22 109.8 118 53.4
arahy.Tifrunner.gnm1.ann1.6C93RA Arachis hypogaea HOM05D006374 ORTHO05D006349 4.1e-22 109.4 103 55.3
Gohir.D13G208100 Gossypium hirsutum HOM05D006374 ORTHO05D006349 4.1e-22 109.4 110 52.7
Gorai.013G237200 Gossypium raimondii HOM05D006374 ORTHO05D006349 4.1e-22 109.4 110 52.7
Nitab4.5_0000205g0050 Nicotiana tabacum HOM05D006374 ORTHO05D006349 4.1e-22 109.4 142 45.1
Sabra15G0112900 Salix brachista HOM05D006374 ORTHO05D006349 4.1e-22 109.4 98 55.1
MSTRG.18477 Avicennia marina HOM05D006374 ORTHO05D006349 5.4e-22 109.0 134 47.8
Lsat_1_v5_gn_9_14500 Lactuca sativa HOM05D006374 ORTHO05D006349 5.4e-22 109.0 107 55.1
SEGI_23287 Sequoiadendron giganteum HOM05D001292 ORTHO05D006349 1.6e-21 107.5 103 51.5
CANSAT80G0307 Cannabis sativa HOM05D006374 ORTHO05D006349 2.1e-21 107.1 122 49.2
Glyma.04G193100 Glycine max HOM05D006374 ORTHO05D006349 2.1e-21 107.1 100 58.0
PSO384G4638 Papaver somniferum HOM05D006374 ORTHO05D006349 2.1e-21 107.1 102 51.0
SEGI_32304 Sequoiadendron giganteum HOM05D006374 ORTHO05D006349 2.1e-21 107.1 98 54.1
PSO339G5603 Papaver somniferum HOM05D006374 ORTHO05D006349 2.7e-21 106.7 102 50.0
MSTRG.20819 Avicennia marina HOM05D006374 ORTHO05D006349 3.5e-21 106.3 110 52.7
HanXRQChr16g0497711 Helianthus annuus HOM05D006374 ORTHO05D006349 4.6e-21 105.9 100 55.0
PGR083G0950 Punica granatum HOM05D006374 ORTHO05D006349 4.6e-21 105.9 92 58.7
EL10Ac3g05470 Beta vulgaris HOM05D006374 ORTHO05D006349 6.0e-21 105.5 98 56.1
Migut.D00697 Erythranthe guttata HOM05D006374 ORTHO05D006349 7.8e-21 105.1 228 31.6
arahy.Tifrunner.gnm1.ann1.EEZ80W Arachis hypogaea HOM05D006374 ORTHO05D006349 1.3e-20 104.4 103 55.3
Nitab4.5_0003471g0010 Nicotiana tabacum HOM05D006374 ORTHO05D006349 1.3e-20 104.4 156 41.0
Hund05647 Selenicereus undatus HOM05D006374 ORTHO05D006349 1.7e-20 104.0 103 53.4
AUR62026946 Chenopodium quinoa HOM05D006374 ORTHO05D006349 3.9e-20 102.8 91 60.4
COL.COLO4_29525 Corchorus olitorius HOM05D006374 ORTHO05D006349 3.9e-20 102.8 126 48.4
Cc01_g06860 Coffea canephora HOM05D006374 ORTHO05D006349 5.1e-20 102.4 104 48.1
ECA232G1265 Erigeron canadensis HOM05D006374 ORTHO05D006349 6.6e-20 102.1 122 49.2
MD14G1163400 Malus domestica HOM05D006374 ORTHO05D006349 5.6e-19 99.0 111 49.5
Aqoxy5G04000 Aquilegia oxysepala HOM05D001292 ORTHO05D006349 6.2e-18 95.5 99 47.5
PSO339G4060 Papaver somniferum HOM05D006374 ORTHO05D006349 3.1e-17 93.2 92 48.9
THA.LOC104798954 Tarenaya hassleriana HOM05D006374 ORTHO05D006349 4.0e-17 92.8 99 49.5
SGA_v2.0_scaffold29G12157 Striga asiatica HOM05D006374 ORTHO05D006349 2.0e-16 90.5 199 35.7
Oeu025935.3 Olea europaea HOM05D001292 ORTHO05D006349 3.4e-16 89.7 127 40.2
Oeu032041.1 Olea europaea HOM05D001292 ORTHO05D006349 4.4e-16 89.4 193 32.1
Zm00001eb168510 Zea mays HOM05D006374 ORTHO05D006349 6.4e-15 85.5 124 41.1
Aa31LG4G17070 Aethionema arabicum HOM05D006374 ORTHO05D006349 1.1e-14 84.7 100 45.0
unitig_26.g9736 Utricularia gibba HOM05D006730 ORTHO05D006349 1.9e-14 84.0 127 42.5
Migut.D00695 Erythranthe guttata HOM05D006374 ORTHO05D006349 7.1e-14 82.0 102 45.1
CARHR157240 Cardamine hirsuta HOM05D006374 ORTHO05D006349 9.2e-14 81.6 99 43.4
PSO384G0777 Papaver somniferum HOM05D006374 ORTHO05D006349 2.1e-13 80.5 92 45.7
Thhalv10010584m.g Eutrema salsugineum HOM05D006374 ORTHO05D006349 2.7e-13 80.1 99 43.4
Gohir.A07G051500 Gossypium hirsutum HOM05D006374 ORTHO05D006349 2.7e-13 80.1 73 53.4
Gohir.D07G055900 Gossypium hirsutum HOM05D006374 ORTHO05D006349 2.7e-13 80.1 73 53.4
Os11g0214001 Oryza sativa ssp. japonica HOM05D006374 ORTHO05D006349 1.7e-12 77.4 99 39.4
AT3G48480 Arabidopsis thaliana HOM05D006374 ORTHO05D006349 5.1e-12 75.9 118 39.8
Carub.0005s1466 Capsella rubella HOM05D006374 ORTHO05D006349 5.1e-12 75.9 118 40.7
DCAR_015986 Daucus carota HOM05D008184 ORTHO05D010791 1.1e-11 74.7 114 38.6
DCAR_018007 Daucus carota HOM05D001292 ORTHO05D006349 1.1e-11 74.7 111 40.5
AUR62017054 Chenopodium quinoa HOM05D006374 ORTHO05D006349 1.9e-11 73.9 98 40.8
Cc01_g06800 Coffea canephora HOM05D006374 ORTHO05D006349 7.3e-11 72.0 77 44.2
AUR62040664 Chenopodium quinoa HOM05D006374 ORTHO05D006349 1.6e-10 70.9 98 39.8
AUR62044358 Chenopodium quinoa HOM05D006374 ORTHO05D006349 1.6e-10 70.9 98 39.8
Cpa.g.sc4.71 Carica papaya HOM05D006374 ORTHO05D006349 2.8e-10 70.1 44 72.7
Sp5g13550 Schrenkiella parvula HOM05D006374 ORTHO05D006349 2.8e-10 70.1 108 42.6
EL10Ac4g07621 Beta vulgaris HOM05D006374 ORTHO05D006349 3.6e-10 69.7 108 36.1
DCAR_029290 Daucus carota HOM05D014044 ORTHO05D006349 3.6e-10 69.7 98 35.7
A06p27690 Brassica napus HOM05D006374 ORTHO05D006349 4.7e-10 69.3 96 42.7
BcaB02g10649 Brassica carinata HOM05D006374 ORTHO05D006349 1.4e-09 67.8 96 42.7
BcaC01g02345 Brassica carinata HOM05D006374 ORTHO05D006349 2.4e-09 67.0 96 41.7
C03p66330 Brassica napus HOM05D006374 ORTHO05D006349 2.4e-09 67.0 96 41.7
BolC3t18904H Brassica oleracea HOM05D006374 ORTHO05D006349 2.4e-09 67.0 96 41.7
DCAR_005126 Daucus carota HOM05D008184 ORTHO05D015632 2.4e-09 67.0 69 49.3
DCAR_017413 Daucus carota HOM05D014044 ORTHO05D006349 2.4e-09 67.0 98 34.7
Hund23135 Selenicereus undatus HOM05D006374 ORTHO05D006349 3.1e-09 66.6 98 42.9
DCAR_010912 Daucus carota HOM05D006374 ORTHO05D006349 1.5e-08 64.3 86 41.9
Actinidia25584 Actinidia chinensis HOM05D006374 ORTHO05D006349 2.2e-07 60.5 39 66.7
DCAR_005456 Daucus carota HOM05D014044 ORTHO05D006349 2.2e-07 60.5 84 35.7
DCAR_007483 Daucus carota HOM05D006374 ORTHO05D006349 3.8e-07 59.7 77 39.0
DCAR_022671 Daucus carota HOM05D008184 ORTHO05D015632 8.4e-07 58.5 50 56.0
DCAR_026222 Daucus carota HOM05D001045 ORTHO05D001542 1.9e-06 57.4 36 66.7
BraA06t25705Z Brassica rapa HOM05D006374 ORTHO05D006349 4.2e-06 56.2 79 40.5
DCAR_030060 Daucus carota HOM05D014044 ORTHO05D015632 4.2e-06 56.2 62 45.2


User provided reference genes

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