Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000464g0150 Nicotiana tabacum HOM05D007560 ORTHO05D005947 7.0e-74 280.4 131 100.0
Nitab4.5_0000800g0010 Nicotiana tabacum HOM05D007560 ORTHO05D005947 2.1e-25 119.4 71 80.3
Nitab4.5_0001058g0060 Nicotiana tabacum HOM05D007560 ORTHO05D005947 3.5e-25 118.6 71 78.9
Nitab4.5_0006682g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 3.5e-25 118.6 68 80.9
Peaxi162Scf00058g00156 Petunia axillaris HOM05D007560 ORTHO05D005947 9.6e-23 110.5 68 76.5
Peaxi162Scf00153g00103 Petunia axillaris HOM05D007560 ORTHO05D005947 1.2e-20 103.6 74 63.5
Nitab4.5_0001737g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 1.3e-19 100.1 77 59.7
Nitab4.5_0001634g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 8.4e-19 97.4 129 41.1
Peaxi162Scf00191g01113 Petunia axillaris HOM05D007560 ORTHO05D005947 1.1e-18 97.1 68 64.7
Peaxi162Scf00738g00116 Petunia axillaris HOM05D007560 ORTHO05D005947 1.1e-18 97.1 68 64.7
Peaxi162Scf00738g00112 Petunia axillaris HOM05D007560 ORTHO05D005947 2.5e-18 95.9 74 56.8
Peaxi162Scf00408g00045 Petunia axillaris HOM05D007560 ORTHO05D005947 6.0e-17 91.3 74 58.1
Nitab4.5_0000005g0280 Nicotiana tabacum HOM05D007560 ORTHO05D005947 3.9e-16 88.6 75 57.3
Peaxi162Scf00738g00123 Petunia axillaris HOM05D007560 ORTHO05D005947 5.1e-16 88.2 68 60.3
CAN.G135.61 Capsicum annuum HOM05D007560 ORTHO05D005947 4.3e-15 85.1 68 61.8
CAN.G135.62 Capsicum annuum HOM05D007560 ORTHO05D005947 9.6e-15 84.0 76 57.9
Peaxi162Scf00598g00085 Petunia axillaris HOM05D007560 ORTHO05D005947 3.1e-13 79.0 55 65.5
Solyc04g082080.1 Solanum lycopersicum HOM05D007560 ORTHO05D005947 4.1e-13 78.6 85 48.2
PGSC0003DMG400027349 Solanum tuberosum HOM05D007560 ORTHO05D005947 4.1e-13 78.6 89 48.3
PGSC0003DMG400027318 Solanum tuberosum HOM05D007560 ORTHO05D005947 6.9e-13 77.8 87 48.3
PGSC0003DMG400039452 Solanum tuberosum HOM05D007560 ORTHO05D005947 3.4e-12 75.5 66 51.5
Solyc11g007620.1 Solanum lycopersicum HOM05D007560 ORTHO05D005947 5.9e-12 74.7 76 48.7
Solyc11g007650.1 Solanum lycopersicum HOM05D007560 ORTHO05D005947 5.9e-12 74.7 76 48.7
Rhsim11G0103500 Rhododendron simsii HOM05D007560 ORTHO05D005947 5.0e-11 71.6 67 46.3
Cc02_g35550 Coffea canephora HOM05D007560 ORTHO05D005947 2.5e-10 69.3 66 43.9
Lj5C321T2 Lonicera japonica HOM05D007560 ORTHO05D005947 1.2e-09 67.0 74 41.9
Rhsim11G0104000 Rhododendron simsii HOM05D007560 ORTHO05D005947 1.6e-09 66.6 67 43.3
Rhsim11G0104400 Rhododendron simsii HOM05D007560 ORTHO05D005947 1.6e-09 66.6 67 46.3
Rhsim11G0104200 Rhododendron simsii HOM05D007560 ORTHO05D005947 1.3e-08 63.5 67 40.3
Nitab4.5_0009688g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 5.1e-08 61.6 48 58.3
Rhsim11G0103700 Rhododendron simsii HOM05D007560 ORTHO05D005947 5.1e-08 61.6 67 41.8
Rhsim11G0103900 Rhododendron simsii HOM05D007560 ORTHO05D005947 5.1e-08 61.6 67 41.8
Aqoxy6G01701 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 4.3e-07 58.5 66 40.9
Lj8C38T12 Lonicera japonica HOM05D007560 ORTHO05D005947 4.3e-07 58.5 75 38.7
Rhsim11G0104100 Rhododendron simsii HOM05D007560 ORTHO05D005947 4.3e-07 58.5 66 39.4
ClCG11G009300 Citrullus lanatus HOM05D001966 ORTHO05D007227 7.4e-07 57.8 41 65.9
Peaxi162Scf00080g00518 Petunia axillaris HOM05D001966 ORTHO05D007227 7.4e-07 57.8 35 71.4
Rhsim11G0103400 Rhododendron simsii HOM05D007560 ORTHO05D005947 7.4e-07 57.8 67 41.8
Migut.K01081 Erythranthe guttata HOM05D007560 ORTHO05D005947 1.3e-06 57.0 118 31.4
EL10As6g23662 Beta vulgaris HOM05D001325 ORTHO05D001540 1.6e-06 56.6 56 50.0
Hma1.2p1_0544F.1_g175783 Hydrangea macrophylla HOM05D001966 ORTHO05D007227 1.6e-06 56.6 35 74.3
EL10As10g23965 Beta vulgaris HOM05D001966 ORTHO05D007227 3.7e-06 55.5 35 71.4
Lj5C320G6 Lonicera japonica HOM05D007560 ORTHO05D005947 3.7e-06 55.5 77 39.0
Nitab4.5_0000593g0030 Nicotiana tabacum HOM05D007560 ORTHO05D005947 6.3e-06 54.7 74 40.5
Aqoxy5G01975 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 8.2e-06 54.3 74 37.8
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 8.2e-06 54.3 35 71.4
BcaC04g20781 Brassica carinata HOM05D001966 ORTHO05D010449 8.2e-06 54.3 35 71.4
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 8.2e-06 54.3 35 71.4
Cfa023004 Carpinus fangiana HOM05D001966 ORTHO05D007227 8.2e-06 54.3 35 71.4
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 8.2e-06 54.3 35 71.4
HanXRQChr05g0134861 Helianthus annuus HOM05D001966 ORTHO05D007227 8.2e-06 54.3 48 56.2
Lsat_1_v5_gn_2_20521 Lactuca sativa HOM05D001966 ORTHO05D007227 8.2e-06 54.3 35 71.4
Lsat_1_v5_gn_3_110440 Lactuca sativa HOM05D001966 ORTHO05D007227 8.2e-06 54.3 35 71.4
Lsat_1_v5_gn_4_147680 Lactuca sativa HOM05D001966 ORTHO05D007227 8.2e-06 54.3 35 71.4
Lsat_1_v5_gn_4_147860 Lactuca sativa HOM05D001966 ORTHO05D007227 8.2e-06 54.3 35 71.4
Lsat_1_v5_gn_5_181880 Lactuca sativa HOM05D001966 ORTHO05D007227 8.2e-06 54.3 35 71.4
Lsat_1_v5_gn_9_39281 Lactuca sativa HOM05D001966 ORTHO05D007227 8.2e-06 54.3 35 71.4
RhsimPtG0005300 Rhododendron simsii HOM05D001966 ORTHO05D007227 8.2e-06 54.3 35 71.4
Sed0012652 Sechium edule HOM05D001966 ORTHO05D007227 8.2e-06 54.3 35 71.4
Sed0014217 Sechium edule HOM05D001966 ORTHO05D007227 8.2e-06 54.3 35 71.4


User provided reference genes

Program Settings