Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000464g0140 Nicotiana tabacum HOM05D007560 ORTHO05D005947 3.5e-58 228.0 112 100.0
Nitab4.5_0006682g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 1.4e-33 146.4 116 64.7
Peaxi162Scf00153g00103 Petunia axillaris HOM05D007560 ORTHO05D005947 1.1e-32 143.3 103 67.0
Nitab4.5_0001058g0060 Nicotiana tabacum HOM05D007560 ORTHO05D005947 3.7e-31 138.3 116 61.2
Nitab4.5_0006682g0010 Nicotiana tabacum HOM05D007560 ORTHO05D005947 4.8e-31 137.9 97 68.0
Peaxi162Scf00191g01113 Petunia axillaris HOM05D007560 ORTHO05D005947 2.6e-29 132.1 104 63.5
Peaxi162Scf00738g00116 Petunia axillaris HOM05D007560 ORTHO05D005947 2.6e-29 132.1 104 63.5
Peaxi162Scf00738g00002 Petunia axillaris HOM05D007560 ORTHO05D005947 1.8e-25 119.4 97 60.8
Peaxi162Scf00058g00156 Petunia axillaris HOM05D007560 ORTHO05D005947 5.2e-25 117.9 103 56.3
Nitab4.5_0001737g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 2.2e-20 102.4 109 49.5
Nitab4.5_0001634g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 2.9e-20 102.1 71 70.4
Nitab4.5_0021475g0010 Nicotiana tabacum HOM05D007560 ORTHO05D005947 6.5e-20 100.9 110 54.5
Nitab4.5_0009688g0030 Nicotiana tabacum HOM05D007560 ORTHO05D005947 1.6e-18 96.3 112 51.8
Nitab4.5_0009316g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 8.0e-18 94.0 68 69.1
Peaxi162Scf00408g00045 Petunia axillaris HOM05D007560 ORTHO05D005947 3.0e-17 92.0 125 43.2
CAN.G135.61 Capsicum annuum HOM05D007560 ORTHO05D005947 8.2e-15 84.0 104 53.8
Solyc04g082080.1 Solanum lycopersicum HOM05D007560 ORTHO05D005947 1.0e-12 77.0 105 47.6
CAN.G135.62 Capsicum annuum HOM05D007560 ORTHO05D005947 1.5e-11 73.2 105 48.6
PGSC0003DMG400027318 Solanum tuberosum HOM05D007560 ORTHO05D005947 1.5e-11 73.2 108 46.3
Nitab4.5_0009688g0040 Nicotiana tabacum HOM05D007560 ORTHO05D005947 1.9e-11 72.8 83 56.6
Peaxi162Scf00005g02517 Petunia axillaris HOM05D002907 ORTHO05D005554 9.4e-11 70.5 42 66.7
Solyc11g007620.1 Solanum lycopersicum HOM05D007560 ORTHO05D005947 9.4e-11 70.5 109 45.0
Lj5C320G6 Lonicera japonica HOM05D007560 ORTHO05D005947 1.2e-08 63.5 105 32.4
HanXRQChr03g0076061 Helianthus annuus HOM05D000007 ORTHO05D000676 1.5e-08 63.2 73 41.1
HanXRQChr03g0074871 Helianthus annuus HOM05D000007 ORTHO05D000521 5.7e-08 61.2 58 43.1
HanXRQChr08g0209381 Helianthus annuus HOM05D000007 ORTHO05D000521 5.7e-08 61.2 57 45.6
Lj8C38T12 Lonicera japonica HOM05D007560 ORTHO05D005947 2.2e-07 59.3 66 50.0
HanXRQChr10g0295591 Helianthus annuus HOM05D000007 ORTHO05D000521 3.7e-07 58.5 79 36.7
Peaxi162Scf00598g00085 Petunia axillaris HOM05D007560 ORTHO05D005947 6.3e-07 57.8 96 37.5
HanXRQChr03g0076041 Helianthus annuus HOM05D000007 ORTHO05D000676 1.1e-06 57.0 51 49.0
Aqoxy5G01432 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.4e-06 55.8 72 44.4
HanXRQChr00c0237g0572781 Helianthus annuus HOM05D000007 ORTHO05D000521 2.4e-06 55.8 72 38.9
HanXRQChr11g0327481 Helianthus annuus HOM05D000007 ORTHO05D000676 2.4e-06 55.8 72 38.9
QL03p035744 Quercus lobata HOM05D000007 ORTHO05D000521 3.1e-06 55.5 78 38.5
Lj5C336T5 Lonicera japonica HOM05D007560 ORTHO05D005947 4.1e-06 55.1 67 50.7
Lj5C338T9 Lonicera japonica HOM05D007560 ORTHO05D005947 4.1e-06 55.1 56 53.6
Aqoxy5G04188 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 5.4e-06 54.7 87 34.5
Haze_20972 Corylus avellana HOM05D000007 ORTHO05D000039 5.4e-06 54.7 58 50.0
Lj5C338T12 Lonicera japonica HOM05D007560 ORTHO05D005947 5.4e-06 54.7 50 52.0
Lj6C390T13 Lonicera japonica HOM05D007560 ORTHO05D005947 5.4e-06 54.7 67 49.3
Lj8C356T1 Lonicera japonica HOM05D007560 ORTHO05D005947 5.4e-06 54.7 47 55.3
Lj8P356T28 Lonicera japonica HOM05D007560 ORTHO05D005947 5.4e-06 54.7 47 55.3
TWI18G1020 Tripterygium wilfordii HOM05D000007 ORTHO05D000521 5.4e-06 54.7 79 44.3
Rhsim04G0044400 Rhododendron simsii HOM05D000007 ORTHO05D000521 7.0e-06 54.3 51 56.9
RcHm_v2.0_Chr2g0154661 Rosa chinensis HOM05D000007 ORTHO05D000017 7.0e-06 54.3 52 51.9
HanXRQChr03g0074881 Helianthus annuus HOM05D000007 ORTHO05D000521 9.1e-06 53.9 56 41.1
RcHm_v2.0_Chr5g0021181 Rosa chinensis HOM05D008179 ORTHO05D009362 9.1e-06 53.9 89 36.0


User provided reference genes

Program Settings