Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000464g0100 Nicotiana tabacum HOM05D006245 ORTHO05D007260 1.0e-136 490.3 300 100.0
CAN.G1330.24 Capsicum annuum HOM05D006245 ORTHO05D007260 2.4e-85 319.7 304 61.5
PGSC0003DMG400010008 Solanum tuberosum HOM05D006245 ORTHO05D007260 7.7e-84 314.7 309 59.2
Sopen04g036530 Solanum pennellii HOM05D006245 ORTHO05D007260 8.0e-81 304.7 302 58.9
Solyc04g082890.3 Solanum lycopersicum HOM05D006245 ORTHO05D007260 3.0e-80 302.8 302 58.6
Dinv05508 Davidia involucrata HOM05D006245 ORTHO05D007260 1.3e-38 164.5 308 42.9
Actinidia15551 Actinidia chinensis HOM05D006245 ORTHO05D007260 5.6e-34 149.1 287 41.5
Peaxi162Scf00385g00068 Petunia axillaris HOM05D006245 ORTHO05D007260 7.3e-34 148.7 229 47.6
vmacro21743 Vaccinium macrocarpon HOM05D006245 ORTHO05D007260 4.7e-33 146.0 310 36.8
QL02p016022 Quercus lobata HOM05D006245 ORTHO05D007260 1.1e-32 144.8 308 43.8
Haze_22875 Corylus avellana HOM05D006245 ORTHO05D007260 5.8e-31 139.0 304 45.1
Cfa014151 Carpinus fangiana HOM05D006245 ORTHO05D007260 7.6e-31 138.7 302 44.7
DCAR_017622 Daucus carota HOM05D006245 ORTHO05D007260 7.6e-31 138.7 287 44.3
CiPaw.08G078200 Carya illinoinensis HOM05D006245 ORTHO05D007260 4.1e-29 132.9 317 43.8
Ciclev10002005m.g Citrus clementina HOM05D006245 ORTHO05D007260 4.1e-29 132.9 308 34.4
Migut.O00838 Erythranthe guttata HOM05D006245 ORTHO05D007260 9.2e-29 131.7 293 41.0
MSTRG.22076 Avicennia marina HOM05D006245 ORTHO05D007260 2.1e-28 130.6 295 36.3
Manes.18G005000 Manihot esculenta HOM05D006245 ORTHO05D007260 6.0e-28 129.0 319 37.3
Migut.N02994 Erythranthe guttata HOM05D006245 ORTHO05D007260 7.8e-28 128.6 282 42.6
Manes.18G001000 Manihot esculenta HOM05D006245 ORTHO05D007260 1.3e-27 127.9 312 36.9
DCAR_009857 Daucus carota HOM05D006245 ORTHO05D007260 5.1e-27 125.9 127 53.5
CiPaw.07G131600 Carya illinoinensis HOM05D006245 ORTHO05D007260 6.6e-27 125.6 314 36.0
SalBow6G6430 Salvia bowleyana HOM05D006245 ORTHO05D007260 8.6e-27 125.2 300 38.7
PGR031G1027 Punica granatum HOM05D006245 ORTHO05D007260 5.6e-26 122.5 298 40.3
PGR083G2384 Punica granatum HOM05D006245 ORTHO05D007260 3.6e-25 119.8 300 36.7
ECA248G0813 Erigeron canadensis HOM05D004589 ORTHO05D005848 4.7e-25 119.4 138 55.1
MELO3C017064.2 Cucumis melo HOM05D006245 ORTHO05D007260 8.1e-25 118.6 338 32.5
Lsat_1_v5_gn_2_3181 Lactuca sativa HOM05D006245 ORTHO05D007260 8.1e-25 118.6 299 36.1
Lalb_Chr19g0129191 Lupinus albus HOM05D006245 ORTHO05D007260 1.8e-24 117.5 127 53.5
MSTRG.24524 Avicennia marina HOM05D006245 ORTHO05D007260 2.4e-24 117.1 306 36.3
Psat6g093400 Pisum sativum HOM05D006245 ORTHO05D007260 3.1e-24 116.7 268 37.3
SGA_v2.0_scaffold220G42616 Striga asiatica HOM05D006245 ORTHO05D007260 3.1e-24 116.7 299 35.8
GSVIVG01013443001 Vitis vinifera HOM05D006245 ORTHO05D007260 5.2e-24 115.9 125 52.8
TWI56G0455 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 6.9e-24 115.5 311 35.0
Rhsim06G0001900 Rhododendron simsii HOM05D006245 ORTHO05D007260 1.2e-23 114.8 333 34.8
Cpa.g.c24967.6 Carica papaya HOM05D006245 ORTHO05D007260 2.6e-23 113.6 300 35.7
Gorai.009G309200 Gossypium raimondii HOM05D006245 ORTHO05D007260 2.6e-23 113.6 279 35.8
Medtr1g050502 Medicago truncatula HOM05D006245 ORTHO05D007260 4.4e-23 112.8 127 52.8
Sed0007375 Sechium edule HOM05D006245 ORTHO05D007260 5.8e-23 112.5 121 53.7
Gohir.D05G292800 Gossypium hirsutum HOM05D006245 ORTHO05D007260 7.6e-23 112.1 279 35.5
arahy.Tifrunner.gnm1.ann1.ZHJ1I0 Arachis hypogaea HOM05D006245 ORTHO05D007260 9.9e-23 111.7 286 32.2
Cpa.g.sc438.4 Carica papaya HOM05D006245 ORTHO05D007260 9.9e-23 111.7 312 35.3
TWI36G0521 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 9.9e-23 111.7 123 54.5
ClCG11G019110 Citrullus lanatus HOM05D006245 ORTHO05D007260 1.7e-22 110.9 337 30.6
Lj5g0002209 Lotus japonicus HOM05D006245 ORTHO05D007260 1.7e-22 110.9 298 32.2
Phvul.007G247600 Phaseolus vulgaris HOM05D006245 ORTHO05D007260 2.2e-22 110.5 124 50.8
Thecc.08G098200 Theobroma cacao HOM05D006245 ORTHO05D007260 2.2e-22 110.5 313 32.9
CsaV3_4G037700 Cucumis sativus L. HOM05D006245 ORTHO05D007260 3.8e-22 109.8 301 32.2
Glyma.02G161100 Glycine max HOM05D006245 ORTHO05D007260 3.8e-22 109.8 304 31.2
Cc10_g00180 Coffea canephora HOM05D006245 ORTHO05D007260 1.1e-21 108.2 126 50.0
Gohir.A05G291700 Gossypium hirsutum HOM05D006245 ORTHO05D007260 1.1e-21 108.2 309 34.6
FAN04G2011 Fragaria x ananassa HOM05D006245 ORTHO05D007260 1.4e-21 107.8 319 32.3
RcHm_v2.0_Chr7g0217321 Rosa chinensis HOM05D006245 ORTHO05D007260 1.4e-21 107.8 315 35.2
FAN08G3087 Fragaria x ananassa HOM05D006245 ORTHO05D007260 3.2e-21 106.7 319 31.7
Eucgr.F03612 Eucalyptus grandis HOM05D006245 ORTHO05D007260 4.2e-21 106.3 130 49.2
arahy.Tifrunner.gnm1.ann1.9KRV5K Arachis hypogaea HOM05D006245 ORTHO05D007260 2.1e-20 104.0 292 31.8
Sc02g0009330 Simmondsia chinensis HOM05D006245 ORTHO05D007260 2.1e-20 104.0 310 37.1
Prupe.5G003000 Prunus persica HOM05D006245 ORTHO05D007260 7.8e-20 102.1 322 34.2
Hund01813 Selenicereus undatus HOM05D006245 ORTHO05D007260 7.8e-20 102.1 125 50.4
EL10Ac1g01844 Beta vulgaris HOM05D006245 ORTHO05D007260 1.7e-19 100.9 302 33.4
HanXRQChr14g0427941 Helianthus annuus HOM05D006245 ORTHO05D007260 2.3e-19 100.5 122 54.1
Gohir.D04G005900 Gossypium hirsutum HOM05D006245 ORTHO05D007260 3.0e-19 100.1 293 33.8
Potri.005G257900 Populus trichocarpa HOM05D006245 ORTHO05D007260 3.0e-19 100.1 304 38.2
Gorai.012G007100 Gossypium raimondii HOM05D006245 ORTHO05D007260 3.9e-19 99.8 293 33.8
CANSAT11G2487 Cannabis sativa HOM05D006245 ORTHO05D007260 6.6e-19 99.0 300 31.3
Sp1g32200 Schrenkiella parvula HOM05D006245 ORTHO05D007260 6.6e-19 99.0 300 29.7
MD06G1002100 Malus domestica HOM05D006245 ORTHO05D007260 1.1e-18 98.2 299 31.4
BraA08t32777Z Brassica rapa HOM05D006245 ORTHO05D007260 1.5e-18 97.8 266 32.3
unitig_8.g4814 Utricularia gibba HOM05D006245 ORTHO05D007260 1.5e-18 97.8 120 50.8
A08p07630 Brassica napus HOM05D006245 ORTHO05D007260 1.9e-18 97.4 292 31.8
FAN18G3272 Fragaria x ananassa HOM05D006245 ORTHO05D007260 2.5e-18 97.1 319 29.5
BcaB04g17767 Brassica carinata HOM05D006245 ORTHO05D007260 4.3e-18 96.3 308 32.1
FvH4_5g26440 Fragaria vesca HOM05D006245 ORTHO05D007260 4.3e-18 96.3 319 29.5
FAN13G0213 Fragaria x ananassa HOM05D006245 ORTHO05D007260 4.3e-18 96.3 319 29.5
Atru.chr13.34 Acer truncatum HOM05D006245 ORTHO05D007260 7.3e-18 95.5 272 34.6
TAR381G0633 Trochodendron aralioides HOM05D006245 ORTHO05D007260 7.3e-18 95.5 289 33.9
COL.COLO4_03408 Corchorus olitorius HOM05D006245 ORTHO05D007260 1.3e-17 94.7 309 36.9
Gohir.A05G409532 Gossypium hirsutum HOM05D006245 ORTHO05D007260 1.6e-17 94.4 121 48.8
MBI04_g42540_MAGBIO Magnolia biondii HOM05D006245 ORTHO05D007260 2.8e-17 93.6 252 30.2
Nn6g31596 Nelumbo nucifera HOM05D006245 ORTHO05D007260 2.8e-17 93.6 251 32.7
TPR.G10624 Trifolium pratense HOM05D006245 ORTHO05D007260 2.8e-17 93.6 63 79.4
CARHR035240 Cardamine hirsuta HOM05D006245 ORTHO05D007260 3.6e-17 93.2 257 35.8
Oeu042496.1 Olea europaea HOM05D006245 ORTHO05D007260 3.6e-17 93.2 257 40.1
BcaC07g37450 Brassica carinata HOM05D006245 ORTHO05D007260 4.8e-17 92.8 273 31.5
C08p09220 Brassica napus HOM05D006245 ORTHO05D007260 4.8e-17 92.8 273 31.5
BolC8t47771H Brassica oleracea HOM05D006245 ORTHO05D007260 4.8e-17 92.8 273 31.5
Aa31LG6G10010 Aethionema arabicum HOM05D006245 ORTHO05D007260 8.1e-17 92.0 293 32.8
unitig_578.g16243 Utricularia gibba HOM05D006245 ORTHO05D007260 8.1e-17 92.0 284 32.7
Eucgr.F01824 Eucalyptus grandis HOM05D006245 ORTHO05D007260 9.0e-16 88.6 307 31.6
Aqoxy6G03039 Aquilegia oxysepala HOM05D006245 ORTHO05D007260 1.2e-15 88.2 130 50.0
AL1G51480 Arabidopsis lyrata HOM05D006245 ORTHO05D007260 1.5e-15 87.8 280 38.6
Thhalv10004635m.g Eutrema salsugineum HOM05D006245 ORTHO05D007260 3.4e-15 86.7 300 31.3
Actinidia17088 Actinidia chinensis HOM05D001218 ORTHO05D004088 5.8e-15 85.9 58 77.6
Carub.0001s3439 Capsella rubella HOM05D006245 ORTHO05D007260 4.9e-14 82.8 125 42.4
AT1G42990 Arabidopsis thaliana HOM05D006245 ORTHO05D007260 2.4e-13 80.5 262 37.8
Ah.11g042230 Amaranthus hybridus HOM05D006245 ORTHO05D007260 7.1e-13 79.0 66 66.7
Eucgr.F02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 1.6e-12 77.8 81 55.6
PSO541G3542 Papaver somniferum HOM05D006245 ORTHO05D007260 4.6e-12 76.3 300 33.3
Zm00001eb388050 Zea mays HOM05D006245 ORTHO05D007260 4.6e-12 76.3 120 39.2
PSO675G9277 Papaver somniferum HOM05D006245 ORTHO05D007260 3.0e-11 73.6 269 34.2
THA.LOC104813184 Tarenaya hassleriana HOM05D006245 ORTHO05D007260 8.7e-11 72.0 304 34.9
Eucgr.G02751 Eucalyptus grandis HOM05D006245 ORTHO05D007260 3.3e-10 70.1 69 56.5
HPP92_003836 Vanilla planifolia HOM05D006245 ORTHO05D007260 4.3e-10 69.7 285 29.1
CSS0018800 Camellia sinensis var. sinensis HOM05D006245 ORTHO05D007260 1.3e-09 68.2 48 70.8
Ca_26636_v3 Cicer arietinum L. HOM05D006245 ORTHO05D007260 8.1e-09 65.5 70 57.1
Eucgr.L02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 2.4e-08 63.9 86 52.3
Duzib114G1035 Durio zibethinus HOM05D006245 ORTHO05D007260 2.6e-07 60.5 215 29.3
AUR62035186 Chenopodium quinoa HOM05D006245 ORTHO05D007260 4.5e-07 59.7 78 51.3
VMungo0720G1847 Vigna mungo HOM05D006245 ORTHO05D007260 7.6e-07 58.9 48 64.6
ATR0605G375 Amborella trichopoda HOM05D006245 ORTHO05D007260 1.7e-06 57.8 63 54.0
AUR62041341 Chenopodium quinoa HOM05D006245 ORTHO05D007260 2.2e-06 57.4 48 66.7
AUR62043321 Chenopodium quinoa HOM05D006245 ORTHO05D007260 3.8e-06 56.6 81 45.7
CDE05G2672 Ceratophyllum demersum HOM05D006245 ORTHO05D007260 8.4e-06 55.5 262 27.5


User provided reference genes

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