Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000457g0290 Nicotiana tabacum HOM05D006036 ORTHO05D007736 5.8e-103 377.5 179 100.0
Nitab4.5_0005372g0020 Nicotiana tabacum HOM05D006036 ORTHO05D007736 1.0e-75 287.0 211 71.1
PGSC0003DMG400012774 Solanum tuberosum HOM05D006036 ORTHO05D007736 2.3e-75 285.8 207 72.0
Solyc01g091360.4 Solanum lycopersicum HOM05D006036 ORTHO05D007736 2.1e-73 279.3 207 70.0
Sopen01g037100 Solanum pennellii HOM05D006036 ORTHO05D007736 8.1e-73 277.3 207 69.6
SGA_v2.0_scaffold153G37014 Striga asiatica HOM05D006036 ORTHO05D001464 6.2e-57 224.6 184 63.6
Oeu037915.1 Olea europaea HOM05D006036 ORTHO05D007736 2.0e-55 219.5 213 57.7
CiPaw.01G261900 Carya illinoinensis HOM05D006036 ORTHO05D007736 1.0e-54 217.2 210 57.6
PSO782G0421 Papaver somniferum HOM05D006036 ORTHO05D007736 5.0e-54 214.9 179 60.3
Rhsim01G0147400 Rhododendron simsii HOM05D006036 ORTHO05D007736 8.4e-54 214.2 162 66.7
Dinv32378 Davidia involucrata HOM05D006036 ORTHO05D007736 1.4e-53 213.4 213 57.3
Actinidia12688 Actinidia chinensis HOM05D006036 ORTHO05D007736 4.2e-53 211.8 210 55.2
PSO478G2400 Papaver somniferum HOM05D006036 ORTHO05D007736 3.5e-52 208.8 192 57.3
SalBow5G0783 Salvia bowleyana HOM05D006036 ORTHO05D007736 4.6e-52 208.4 216 55.1
Glyma.03G023900 Glycine max HOM05D006036 ORTHO05D007736 6.1e-52 208.0 210 54.8
Cfa001720 Carpinus fangiana HOM05D006036 ORTHO05D007736 7.9e-52 207.6 210 54.8
Duzib133G1287 Durio zibethinus HOM05D006036 ORTHO05D007736 1.3e-51 206.8 211 55.0
SalBow5G3583 Salvia bowleyana HOM05D006036 ORTHO05D007736 1.3e-51 206.8 216 55.1
Glyma.01G142900 Glycine max HOM05D006036 ORTHO05D007736 1.8e-51 206.5 213 54.9
Haze_16816 Corylus avellana HOM05D006036 ORTHO05D007736 2.3e-51 206.1 210 54.8
Glyma.14G070200 Glycine max HOM05D006036 ORTHO05D007736 2.3e-51 206.1 210 54.8
Medtr4g023550 Medicago truncatula HOM05D006036 ORTHO05D007736 2.3e-51 206.1 211 53.6
vmacro21009 Vaccinium macrocarpon HOM05D006036 ORTHO05D007736 2.3e-51 206.1 160 64.4
MSTRG.4890 Avicennia marina HOM05D006036 ORTHO05D007736 3.0e-51 205.7 215 54.9
QL08p052466 Quercus lobata HOM05D006036 ORTHO05D007736 3.9e-51 205.3 214 54.2
Lj9A569G50 Lonicera japonica HOM05D006036 ORTHO05D007736 5.1e-51 204.9 214 54.2
Nn1g01232 Nelumbo nucifera HOM05D006036 ORTHO05D007736 6.7e-51 204.5 212 54.2
Hma1.2p1_1122F.1_g259290 Hydrangea macrophylla HOM05D006036 ORTHO05D007736 1.1e-50 203.8 128 76.6
Hund17020 Selenicereus undatus HOM05D006036 ORTHO05D007736 1.5e-50 203.4 218 53.7
Gohir.A08G134500 Gossypium hirsutum HOM05D006036 ORTHO05D007736 1.9e-50 203.0 211 56.9
Psat7g231640 Pisum sativum HOM05D006036 ORTHO05D007736 5.7e-50 201.4 210 50.5
DCAR_031531 Daucus carota HOM05D006036 ORTHO05D007736 9.7e-50 200.7 188 57.4
EL10Ac1g00899 Beta vulgaris HOM05D006036 ORTHO05D007736 2.2e-49 199.5 216 53.7
Thecc.01G376100 Theobroma cacao HOM05D006036 ORTHO05D007736 2.8e-49 199.1 212 52.8
Sed0014119 Sechium edule HOM05D006036 ORTHO05D007736 6.3e-49 198.0 215 50.7
CsaV3_6G006160 Cucumis sativus L. HOM05D006036 ORTHO05D007736 1.1e-48 197.2 214 50.0
unitig_8.g4983 Utricularia gibba HOM05D006036 ORTHO05D007736 1.1e-48 197.2 198 54.5
Sed0006891 Sechium edule HOM05D006036 ORTHO05D007736 1.8e-48 196.4 216 51.9
Ca_03013_v3 Cicer arietinum L. HOM05D006036 ORTHO05D007736 2.4e-48 196.1 211 51.2
Cc02_g36690 Coffea canephora HOM05D006036 ORTHO05D007736 3.1e-48 195.7 217 53.0
Aqoxy7G00627 Aquilegia oxysepala HOM05D006036 ORTHO05D007736 4.1e-48 195.3 173 58.4
TWI14G1308 Tripterygium wilfordii HOM05D006036 ORTHO05D007736 4.1e-48 195.3 211 50.7
Sc02g0002580 Simmondsia chinensis HOM05D006036 ORTHO05D007736 5.3e-48 194.9 214 52.3
GSVIVG01027612001 Vitis vinifera HOM05D006036 ORTHO05D007736 6.9e-48 194.5 172 59.9
arahy.Tifrunner.gnm1.ann1.B3VI1A Arachis hypogaea HOM05D006036 ORTHO05D007736 9.0e-48 194.1 157 59.9
HanXRQChr16g0520241 Helianthus annuus HOM05D006036 ORTHO05D007736 9.0e-48 194.1 215 52.6
PGR042G0035 Punica granatum HOM05D006036 ORTHO05D007736 9.0e-48 194.1 213 49.8
Ah.16g109830 Amaranthus hybridus HOM05D006036 ORTHO05D007736 1.5e-47 193.4 215 49.8
CSS0022013 Camellia sinensis var. sinensis HOM05D006036 ORTHO05D007736 3.4e-47 192.2 210 51.9
Cpa.g.sc349.4 Carica papaya HOM05D006036 ORTHO05D007736 4.5e-47 191.8 211 53.1
Lj3g0008791 Lotus japonicus HOM05D006036 ORTHO05D007736 4.5e-47 191.8 211 52.1
RcHm_v2.0_Chr1g0350591 Rosa chinensis HOM05D006036 ORTHO05D007736 4.5e-47 191.8 211 51.2
Lalb_Chr07g0189801 Lupinus albus HOM05D006036 ORTHO05D007736 5.9e-47 191.4 210 51.0
Atru.chr5.310 Acer truncatum HOM05D006036 ORTHO05D007736 7.7e-47 191.0 210 52.9
MD02G1204100 Malus domestica HOM05D006036 ORTHO05D007736 7.7e-47 191.0 206 54.4
CSS0011162 Camellia sinensis var. sinensis HOM05D006036 ORTHO05D007736 1.0e-46 190.7 210 51.9
FAN10G3538 Fragaria x ananassa HOM05D006036 ORTHO05D007736 1.0e-46 190.7 214 51.4
TPR.G9852 Trifolium pratense HOM05D006036 ORTHO05D007736 1.0e-46 190.7 162 58.6
FAN03G0372 Fragaria x ananassa HOM05D006036 ORTHO05D007736 1.7e-46 189.9 213 52.1
MBI04_g35276_MAGBIO Magnolia biondii HOM05D006036 ORTHO05D007736 3.8e-46 188.7 205 51.7
AUR62013628 Chenopodium quinoa HOM05D006036 ORTHO05D007736 5.0e-46 188.3 216 50.9
Phvul.010G084400 Phaseolus vulgaris HOM05D006036 ORTHO05D007736 6.5e-46 188.0 182 54.4
Prupe.2G145700 Prunus persica HOM05D006036 ORTHO05D007736 6.5e-46 188.0 210 53.3
FAN01G0425 Fragaria x ananassa HOM05D006036 ORTHO05D007736 4.2e-45 185.3 211 50.2
FvH4_7g11910 Fragaria vesca HOM05D006036 ORTHO05D007736 1.2e-44 183.7 214 50.9
Glyma.08G286100 Glycine max HOM05D006036 ORTHO05D007736 1.6e-44 183.3 209 51.2
Lsat_1_v5_gn_4_40940 Lactuca sativa HOM05D006036 ORTHO05D007736 1.6e-44 183.3 160 60.6
Manes.05G045200 Manihot esculenta HOM05D006036 ORTHO05D007736 2.1e-44 183.0 211 50.7
SEGI_01363 Sequoiadendron giganteum HOM05D006036 ORTHO05D007736 2.7e-44 182.6 180 53.3
ECA234G4399 Erigeron canadensis HOM05D006036 ORTHO05D007736 3.6e-44 182.2 197 52.8
Eucgr.E01417 Eucalyptus grandis HOM05D006036 ORTHO05D007736 7.9e-44 181.0 169 58.0
ATR0810G113 Amborella trichopoda HOM05D006036 ORTHO05D007736 1.4e-43 180.3 183 52.5
Sabra02G0117300 Salix brachista HOM05D006036 ORTHO05D007736 1.4e-43 180.3 181 54.1
Sabra02G0115600 Salix brachista HOM05D006036 ORTHO05D007736 3.9e-43 178.7 181 53.6
CANSAT56G2189 Cannabis sativa HOM05D006036 ORTHO05D007736 6.7e-43 177.9 181 53.6
CDE02G2016 Ceratophyllum demersum HOM05D006036 ORTHO05D007736 6.7e-43 177.9 185 54.6
Zm00001eb210410 Zea mays HOM05D006036 ORTHO05D007736 6.7e-43 177.9 164 55.5
Potri.002G148400 Populus trichocarpa HOM05D006036 ORTHO05D007736 1.5e-42 176.8 181 53.6
vmacro21008 Vaccinium macrocarpon HOM05D006036 ORTHO05D007736 7.4e-42 174.5 136 61.8
Medtr7g074920 Medicago truncatula HOM05D006036 ORTHO05D007736 4.8e-41 171.8 181 48.6
CARHR171200 Cardamine hirsuta HOM05D006036 ORTHO05D007736 3.1e-40 169.1 165 56.4
arahy.Tifrunner.gnm1.ann1.Y8TVDJ Arachis hypogaea HOM05D006036 ORTHO05D007736 5.3e-40 168.3 137 57.7
Carub.0005s2756 Capsella rubella HOM05D006036 ORTHO05D007736 3.4e-39 165.6 210 48.6
AT3G60810 Arabidopsis thaliana HOM05D006036 ORTHO05D007736 5.9e-39 164.9 210 49.0
THA.LOC104802443 Tarenaya hassleriana HOM05D006036 ORTHO05D007736 5.9e-39 164.9 211 47.9
Thhalv10006234m.g Eutrema salsugineum HOM05D006036 ORTHO05D007736 1.0e-38 164.1 211 46.9
Os03g0858700 Oryza sativa ssp. japonica HOM05D006036 ORTHO05D007736 2.2e-38 162.9 162 51.9
BolC8t51167H Brassica oleracea HOM05D006036 ORTHO05D007736 2.9e-38 162.5 165 53.9
Sp5g02440 Schrenkiella parvula HOM05D006036 ORTHO05D007736 3.8e-38 162.2 165 53.9
AL5G43130 Arabidopsis lyrata HOM05D006036 ORTHO05D007736 5.0e-38 161.8 211 47.9
Aa31LG10G15050 Aethionema arabicum HOM05D006036 ORTHO05D007736 6.5e-38 161.4 210 48.1
A09p53070 Brassica napus HOM05D006036 ORTHO05D007736 6.5e-38 161.4 165 53.3
BcaC07g40602 Brassica carinata HOM05D006036 ORTHO05D007736 8.5e-38 161.0 165 53.3
C08p35770 Brassica napus HOM05D006036 ORTHO05D007736 8.5e-38 161.0 165 53.3
BcaC07g42642 Brassica carinata HOM05D006036 ORTHO05D007736 4.2e-37 158.7 169 50.9
Gohir.D08G155400 Gossypium hirsutum HOM05D006036 ORTHO05D007736 4.2e-37 158.7 185 53.5
AUR62004220 Chenopodium quinoa HOM05D006036 ORTHO05D007736 2.1e-36 156.4 137 59.1
Ciclev10022362m.g Citrus clementina HOM05D006036 ORTHO05D007736 2.3e-35 152.9 211 45.5
Mapoly0007s0216 Marchantia polymorpha HOM05D006036 ORTHO05D007736 3.0e-35 152.5 180 44.4
Peaxi162Scf00021g01720 Petunia axillaris HOM05D006036 ORTHO05D007736 3.0e-35 152.5 212 46.2
BraA09t40733Z Brassica rapa HOM05D006036 ORTHO05D007736 6.7e-35 151.4 164 51.2
Pp3c23_9860 Physcomitrium patens HOM05D006036 ORTHO05D007736 1.1e-34 150.6 217 41.5
FAN10G0738 Fragaria x ananassa HOM05D006036 ORTHO05D007736 5.7e-34 148.3 133 56.4
AagrBONN_evm.TU.Sc2ySwM_117.1558 Anthoceros agrestis HOM05D006036 ORTHO05D007736 4.8e-33 145.2 158 46.8
VMungo0251G0926 Vigna mungo HOM05D006036 ORTHO05D007736 6.3e-33 144.8 212 43.9
SMO143G0045 Selaginella moellendorffii HOM05D006036 ORTHO05D007736 2.0e-31 139.8 137 48.9
COL.COLO4_12549 Corchorus olitorius HOM05D006036 ORTHO05D007736 3.5e-31 139.0 142 55.6
Ca_19909_v3 Cicer arietinum L. HOM05D006036 ORTHO05D007736 1.3e-30 137.1 100 61.0
Migut.N01635 Erythranthe guttata HOM05D006036 ORTHO05D007736 1.7e-30 136.7 144 56.2
Glyma.09G269100 Glycine max HOM05D006036 ORTHO05D007736 3.6e-28 129.0 104 59.6
VMungo0331G0186 Vigna mungo HOM05D006036 ORTHO05D007736 3.6e-28 129.0 213 39.0
MELO3C034959.2 Cucumis melo HOM05D006036 ORTHO05D007736 5.7e-26 121.7 118 54.2
ClCG06G000370 Citrullus lanatus HOM05D006036 ORTHO05D007736 2.2e-25 119.8 213 36.6
Cre11.g468750 Chlamydomonas reinhardtii HOM05D006036 ORTHO05D007736 2.8e-25 119.4 177 39.5
Lalb_Chr03g0039561 Lupinus albus HOM05D006036 ORTHO05D007736 2.0e-23 113.2 103 50.5
Ciclev10033315m.g Citrus clementina HOM05D006036 ORTHO05D007736 5.0e-22 108.6 94 60.6
CAN.G388.12 Capsicum annuum HOM05D006036 ORTHO05D007736 7.2e-21 104.8 92 58.7
Psat3g116040 Pisum sativum HOM05D006036 ORTHO05D007736 1.4e-16 90.5 73 58.9
MELO3C035247.2 Cucumis melo HOM05D006036 ORTHO05D007736 5.9e-15 85.1 95 48.4
arahy.Tifrunner.gnm1.ann1.WD24C8 Arachis hypogaea HOM05D006036 ORTHO05D007736 1.9e-13 80.1 70 58.6
FAN06G1700 Fragaria x ananassa HOM05D006036 ORTHO05D007736 1.8e-11 73.6 38 78.9
FAN06G2896 Fragaria x ananassa HOM05D006036 ORTHO05D007736 1.8e-11 73.6 38 78.9
Gorai.007G091200 Gossypium raimondii HOM05D001611 ORTHO05D001464 1.8e-11 73.6 37 83.8
Gohir.D11G085366 Gossypium hirsutum HOM05D001611 ORTHO05D001464 5.2e-11 72.0 37 81.1
MCO13G087 Micromonas commoda HOM05D006036 ORTHO05D007736 2.0e-10 70.1 144 32.6
arahy.Tifrunner.gnm1.ann1.BW32E7 Arachis hypogaea HOM05D006036 ORTHO05D000587 2.6e-10 69.7 61 59.0
CBR_g54966 Chara braunii HOM05D006036 ORTHO05D007736 2.2e-09 66.6 38 73.7
Lalb_Chr03g0039551 Lupinus albus HOM05D006036 ORTHO05D007736 3.7e-09 65.9 37 75.7
Lj1g0011795 Lotus japonicus HOM05D006036 ORTHO05D007736 4.9e-09 65.5 42 64.3
Ca_07819_v3 Cicer arietinum L. HOM05D006036 ORTHO05D007736 8.3e-09 64.7 37 73.0


User provided reference genes

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