Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000456g0120 Nicotiana tabacum HOM05D001765 ORTHO05D005876 1.3e-90 337.0 265 100.0
Nitab4.5_0000276g0120 Nicotiana tabacum HOM05D001765 ORTHO05D005876 2.8e-85 319.3 266 97.0
Nitab4.5_0004323g0040 Nicotiana tabacum HOM05D001765 ORTHO05D005876 1.9e-81 306.6 192 95.8
Peaxi162Scf00065g00002 Petunia axillaris HOM05D001765 ORTHO05D005876 3.3e-78 295.8 194 92.3
CAN.G874.72 Capsicum annuum HOM05D001765 ORTHO05D005876 8.0e-77 291.2 234 87.6
Nitab4.5_0010629g0030 Nicotiana tabacum HOM05D001765 ORTHO05D005876 1.1e-76 290.8 266 88.7
Sopen01g026230 Solanum pennellii HOM05D001765 ORTHO05D005876 1.8e-76 290.0 194 91.2
Solyc01g060030.3 Solanum lycopersicum HOM05D001765 ORTHO05D005876 8.9e-76 287.7 194 90.7
Actinidia40362 Actinidia chinensis HOM05D001765 ORTHO05D005876 6.2e-69 265.0 195 80.0
Cc03_g00980 Coffea canephora HOM05D001765 ORTHO05D005876 1.1e-68 264.2 194 84.5
Lj6P689T37 Lonicera japonica HOM05D001765 ORTHO05D005876 3.1e-68 262.7 196 83.7
Dinv44303 Davidia involucrata HOM05D001765 ORTHO05D005876 2.2e-66 256.5 155 87.1
CSS0034555 Camellia sinensis var. sinensis HOM05D001765 ORTHO05D005876 2.9e-66 256.1 195 76.9
Hma1.2p1_0013F.1_g008730 Hydrangea macrophylla HOM05D001765 ORTHO05D005876 4.9e-66 255.4 241 79.7
CiPaw.02G075900 Carya illinoinensis HOM05D001765 ORTHO05D005876 1.1e-65 254.2 193 85.5
Haze_17391 Corylus avellana HOM05D001765 ORTHO05D005876 4.1e-65 252.3 191 84.8
Rhsim04G0234200 Rhododendron simsii HOM05D001765 ORTHO05D005876 4.1e-65 252.3 197 77.7
TWI09G0718 Tripterygium wilfordii HOM05D001765 ORTHO05D005876 1.2e-64 250.8 190 78.9
Oeu063485.1 Olea europaea HOM05D001765 ORTHO05D005876 1.6e-64 250.4 191 81.7
MD16G1157200 Malus domestica HOM05D001765 ORTHO05D005876 2.1e-64 250.0 187 77.5
CSS0002630 Camellia sinensis var. sinensis HOM05D001765 ORTHO05D005876 2.7e-64 249.6 181 81.2
vmacro08062 Vaccinium macrocarpon HOM05D001765 ORTHO05D005876 2.7e-64 249.6 198 79.3
Haze_01276 Corylus avellana HOM05D001765 ORTHO05D005876 1.3e-63 247.3 188 84.6
unitig_749.g13366 Utricularia gibba HOM05D001765 ORTHO05D005876 1.7e-63 246.9 152 86.2
Prupe.1G122100 Prunus persica HOM05D001765 ORTHO05D005876 3.0e-63 246.1 193 77.7
CiPaw.01G139800 Carya illinoinensis HOM05D001765 ORTHO05D005876 3.9e-63 245.7 191 74.3
MSTRG.21776 Avicennia marina HOM05D001765 ORTHO05D005876 5.1e-63 245.4 153 85.6
Cpa.g.sc9.87 Carica papaya HOM05D001765 ORTHO05D005876 1.5e-62 243.8 192 74.0
Oeu001465.1 Olea europaea HOM05D001765 ORTHO05D005876 1.9e-62 243.4 158 82.9
FvH4_4g19461 Fragaria vesca HOM05D001765 ORTHO05D005876 2.5e-62 243.0 195 78.5
MD13G1156300 Malus domestica HOM05D001765 ORTHO05D005876 2.5e-62 243.0 193 78.2
DCAR_002506 Daucus carota HOM05D001765 ORTHO05D005876 3.3e-62 242.7 158 83.5
CDE12G0657 Ceratophyllum demersum HOM05D001765 ORTHO05D005876 7.3e-62 241.5 156 83.3
Hma1.2p1_0078F.1_g040010 Hydrangea macrophylla HOM05D001765 ORTHO05D005876 7.3e-62 241.5 146 86.3
FAN07G0091 Fragaria x ananassa HOM05D001765 ORTHO05D005876 1.6e-61 240.4 195 79.5
HanXRQChr05g0145931 Helianthus annuus HOM05D001765 ORTHO05D005876 1.6e-61 240.4 156 82.7
TAR365G0409 Trochodendron aralioides HOM05D001765 ORTHO05D005876 1.6e-61 240.4 194 77.3
Prupe.1G073200 Prunus persica HOM05D001765 ORTHO05D005876 3.6e-61 239.2 195 76.4
SGA_v2.0_scaffold119G32663 Striga asiatica HOM05D001765 ORTHO05D005876 4.7e-61 238.8 156 84.6
ECA246G2338 Erigeron canadensis HOM05D001765 ORTHO05D005876 6.2e-61 238.4 156 83.3
Atru.chr4.3029 Acer truncatum HOM05D001765 ORTHO05D005876 1.8e-60 236.9 193 75.1
MBI19_g07244_MAGBIO Magnolia biondii HOM05D001765 ORTHO05D005876 1.8e-60 236.9 200 75.0
Nn3g21679 Nelumbo nucifera HOM05D001765 ORTHO05D005876 1.8e-60 236.9 191 77.0
COL.COLO4_34649 Corchorus olitorius HOM05D001765 ORTHO05D005123 2.4e-60 236.5 196 71.4
Migut.N00048 Erythranthe guttata HOM05D001765 ORTHO05D005876 3.1e-60 236.1 150 84.7
TAR633G2429 Trochodendron aralioides HOM05D001765 ORTHO05D005876 3.1e-60 236.1 194 73.7
Duzib052G0074 Durio zibethinus HOM05D001765 ORTHO05D005876 4.0e-60 235.7 192 80.7
Thecc.04G297600 Theobroma cacao HOM05D001765 ORTHO05D005876 4.0e-60 235.7 190 81.1
COL.COLO4_11257 Corchorus olitorius HOM05D001765 ORTHO05D005876 6.8e-60 235.0 193 72.0
TWI73G0761 Tripterygium wilfordii HOM05D001765 ORTHO05D005876 6.8e-60 235.0 190 77.4
Ca_21450_v3 Cicer arietinum L. HOM05D001765 ORTHO05D005876 1.2e-59 234.2 195 71.3
Gohir.A10G171300 Gossypium hirsutum HOM05D001765 ORTHO05D005876 1.2e-59 234.2 192 79.2
Potri.010G142400 Populus trichocarpa HOM05D001765 ORTHO05D005876 1.2e-59 234.2 190 78.4
Lsat_1_v5_gn_6_116901 Lactuca sativa HOM05D001765 ORTHO05D005876 2.0e-59 233.4 156 79.5
PGR031G3587 Punica granatum HOM05D001765 ORTHO05D005876 2.0e-59 233.4 184 74.5
Sc13g0006420 Simmondsia chinensis HOM05D001765 ORTHO05D005876 3.4e-59 232.6 186 73.7
Ciclev10005673m.g Citrus clementina HOM05D001765 ORTHO05D005876 1.3e-58 230.7 154 82.5
Nn4g25612 Nelumbo nucifera HOM05D001765 ORTHO05D005876 1.3e-58 230.7 148 84.5
Gorai.006G079200 Gossypium raimondii HOM05D001765 ORTHO05D005876 2.2e-58 229.9 191 79.1
QL06p011625 Quercus lobata HOM05D001765 ORTHO05D005876 2.2e-58 229.9 148 83.8
Aqoxy1G02157 Aquilegia oxysepala HOM05D001765 ORTHO05D005876 2.9e-58 229.6 156 79.5
Eucgr.A00351 Eucalyptus grandis HOM05D001765 ORTHO05D005876 1.4e-57 227.3 156 77.6
ATR0706G059 Amborella trichopoda HOM05D001765 ORTHO05D005876 2.4e-57 226.5 144 84.0
Gohir.D09G064400 Gossypium hirsutum HOM05D001765 ORTHO05D005876 4.2e-57 225.7 185 76.8
PSO210G5285 Papaver somniferum HOM05D001765 ORTHO05D005876 4.2e-57 225.7 188 69.7
Sabra10G0110100 Salix brachista HOM05D001765 ORTHO05D005876 4.2e-57 225.7 192 76.0
CANSAT78G1829 Cannabis sativa HOM05D001765 ORTHO05D005876 9.2e-57 224.6 149 82.6
Gohir.A09G065500 Gossypium hirsutum HOM05D001765 ORTHO05D005876 9.2e-57 224.6 152 79.6
Aqoxy5G01535 Aquilegia oxysepala HOM05D001765 ORTHO05D005876 2.1e-56 223.4 153 79.1
Ah.04g162900 Amaranthus hybridus HOM05D001765 ORTHO05D005876 2.7e-56 223.0 154 81.2
AUR62037504 Chenopodium quinoa HOM05D001765 ORTHO05D005876 2.7e-56 223.0 154 81.8
Potri.008G107100 Populus trichocarpa HOM05D001765 ORTHO05D005876 2.7e-56 223.0 190 76.8
Gorai.011G199400 Gossypium raimondii HOM05D001765 ORTHO05D005876 3.5e-56 222.6 192 78.1
Glyma.17G032500 Glycine max HOM05D001765 ORTHO05D005876 1.0e-55 221.1 156 77.6
PSO761G0153 Papaver somniferum HOM05D001765 ORTHO05D005876 1.0e-55 221.1 191 69.6
SEGI_21194 Sequoiadendron giganteum HOM05D001765 ORTHO05D005876 1.0e-55 221.1 144 81.9
SEGI_31674 Sequoiadendron giganteum HOM05D001765 ORTHO05D005876 1.0e-55 221.1 144 81.9
Glyma.07G241300 Glycine max HOM05D001765 ORTHO05D005876 3.0e-55 219.5 158 76.6
Sabra08G0081000 Salix brachista HOM05D001765 ORTHO05D005876 3.0e-55 219.5 148 79.7
THA.LOC104802705 Tarenaya hassleriana HOM05D001765 ORTHO05D005876 5.1e-55 218.8 152 78.9
ClCG06G004640 Citrullus lanatus HOM05D001765 ORTHO05D005876 6.6e-55 218.4 149 79.9
Duzib151G0385 Durio zibethinus HOM05D001765 ORTHO05D005876 6.6e-55 218.4 149 79.2
Manes.03G202700 Manihot esculenta HOM05D001765 ORTHO05D005876 6.6e-55 218.4 149 78.5
EL10Ac4g08905 Beta vulgaris HOM05D001765 ORTHO05D005876 8.7e-55 218.0 153 79.1
Gohir.D10G178400 Gossypium hirsutum HOM05D001765 ORTHO05D005876 1.1e-54 217.6 192 77.6
TPR.G16856 Trifolium pratense HOM05D001765 ORTHO05D005876 1.5e-54 217.2 142 81.7
CDE01G0626 Ceratophyllum demersum HOM05D001765 ORTHO05D005876 1.9e-54 216.9 156 76.3
Lalb_Chr13g0298421 Lupinus albus HOM05D001765 ORTHO05D005876 1.9e-54 216.9 152 77.6
Sed0022335 Sechium edule HOM05D001765 ORTHO05D005876 1.9e-54 216.9 145 81.4
VMungo1215G2482 Vigna mungo HOM05D001765 ORTHO05D005876 3.3e-54 216.1 158 75.9
Lalb_Chr07g0182091 Lupinus albus HOM05D001765 ORTHO05D005876 4.3e-54 215.7 142 81.0
VMungo0647G0513 Vigna mungo HOM05D000091 ORTHO05D005533 5.6e-54 215.3 143 80.4
THA.LOC104818892 Tarenaya hassleriana HOM05D001765 ORTHO05D005876 9.6e-54 214.5 155 78.1
Aa31LG11G7990 Aethionema arabicum HOM05D001765 ORTHO05D005876 6.2e-53 211.8 184 74.5
Phvul.003G112500 Phaseolus vulgaris HOM05D001765 ORTHO05D005876 1.1e-52 211.1 196 73.5
Ciclev10016311m.g Citrus clementina HOM05D001765 ORTHO05D005876 4.0e-52 209.1 133 85.7
Phvul.008G245800 Phaseolus vulgaris HOM05D001765 ORTHO05D005876 4.0e-52 209.1 145 78.6
Phvul.009G074533 Phaseolus vulgaris HOM05D001765 ORTHO05D005876 4.0e-52 209.1 145 78.6
Aqoxy5G02976 Aquilegia oxysepala HOM05D001765 ORTHO05D005876 5.3e-52 208.8 153 75.2
AUR62004747 Chenopodium quinoa HOM05D001765 ORTHO05D005876 5.3e-52 208.8 138 86.2
Nitab4.5_0004323g0070 Nicotiana tabacum HOM05D001765 ORTHO05D005876 9.0e-52 208.0 116 96.6
arahy.Tifrunner.gnm1.ann1.03CYAA Arachis hypogaea HOM05D001765 ORTHO05D005876 2.6e-51 206.5 134 82.1
A06p38370 Brassica napus HOM05D001765 ORTHO05D005876 2.6e-51 206.5 153 76.5
BraA06t26751Z Brassica rapa HOM05D001765 ORTHO05D005876 2.6e-51 206.5 153 76.5
Carub.0008s0928 Capsella rubella HOM05D001765 ORTHO05D005876 2.6e-51 206.5 150 76.7
Sp2g19740 Schrenkiella parvula HOM05D001765 ORTHO05D005876 3.4e-51 206.1 166 73.5
SpUn0021_0110 Schrenkiella parvula HOM05D001765 ORTHO05D005876 3.4e-51 206.1 166 73.5
Zm00001eb109890 Zea mays HOM05D001765 ORTHO05D005876 3.4e-51 206.1 138 79.0
AT5G49400 Arabidopsis thaliana HOM05D001765 ORTHO05D005876 4.4e-51 205.7 150 76.7
CARHR182130 Cardamine hirsuta HOM05D001765 ORTHO05D005876 4.4e-51 205.7 173 69.9
CsaV3_2G015100 Cucumis sativus L. HOM05D001765 ORTHO05D005876 9.9e-51 204.5 134 85.1
Psat4g024600 Pisum sativum HOM05D001765 ORTHO05D005876 9.9e-51 204.5 184 65.2
BolC7t44518H Brassica oleracea HOM05D001765 ORTHO05D005876 1.3e-50 204.1 150 76.7
MELO3C023334.2 Cucumis melo HOM05D001765 ORTHO05D005876 1.3e-50 204.1 133 85.0
BcaC06g30699 Brassica carinata HOM05D001765 ORTHO05D005876 1.7e-50 203.8 174 69.0
Thhalv10004753m.g Eutrema salsugineum HOM05D001765 ORTHO05D005876 1.7e-50 203.8 137 81.8
RcHm_v2.0_Chr4g0424571 Rosa chinensis HOM05D001765 ORTHO05D005876 1.7e-50 203.8 195 73.8
Zm00001eb328920 Zea mays HOM05D001765 ORTHO05D005876 2.9e-50 203.0 138 78.3
BcaNung02601 Brassica carinata HOM05D001765 ORTHO05D005876 6.4e-50 201.8 150 76.0
C07p39890 Brassica napus HOM05D001765 ORTHO05D005876 6.4e-50 201.8 150 76.0
AL8G23110 Arabidopsis lyrata HOM05D001765 ORTHO05D005876 8.4e-50 201.4 150 76.0
Sed0021764 Sechium edule HOM05D001765 ORTHO05D005876 2.4e-49 199.9 132 84.1
C02p57300 Brassica napus HOM05D001765 ORTHO05D003527 3.2e-49 199.5 194 70.6
BolC2t11799H Brassica oleracea HOM05D001765 ORTHO05D003527 3.2e-49 199.5 194 70.6
BcaC03g17719 Brassica carinata HOM05D001765 ORTHO05D005876 4.2e-49 199.1 150 75.3
Lj4g0023600 Lotus japonicus HOM05D001765 ORTHO05D005876 9.3e-49 198.0 137 79.6
A02p38130 Brassica napus HOM05D001765 ORTHO05D003527 2.1e-48 196.8 199 69.3
Os11g0199600 Oryza sativa ssp. japonica HOM05D001765 ORTHO05D005876 4.6e-48 195.7 141 76.6
Pp3c14_13970 Physcomitrium patens HOM05D001765 ORTHO05D005876 2.3e-47 193.4 138 78.3
Mapoly0023s0038 Marchantia polymorpha HOM05D001765 ORTHO05D005876 1.1e-46 191.0 204 63.2
AagrBONN_evm.TU.Sc2ySwM_362.810 Anthoceros agrestis HOM05D001765 ORTHO05D005876 2.8e-45 186.4 136 76.5
BraA02t08788Z Brassica rapa HOM05D001765 ORTHO05D005876 2.8e-45 186.4 192 69.3
BcaB07g34154 Brassica carinata HOM05D001765 ORTHO05D005876 2.2e-42 176.8 154 69.5
Manes.15G005450 Manihot esculenta HOM05D001765 ORTHO05D005876 2.9e-42 176.4 138 67.4
Mapoly0171s0012 Marchantia polymorpha HOM05D001765 ORTHO05D005876 1.1e-41 174.5 152 65.1
CAN.G201.7 Capsicum annuum HOM05D001765 ORTHO05D005876 1.6e-40 170.6 194 67.0
Pp3c14_17690 Physcomitrium patens HOM05D001765 ORTHO05D005876 1.0e-39 167.9 135 68.9
AagrBONN_evm.TU.Sc2ySwM_228.5656 Anthoceros agrestis HOM05D001765 ORTHO05D005876 1.6e-37 160.6 121 75.2
MBI19_g17409_MAGBIO Magnolia biondii HOM05D001765 ORTHO05D005876 2.0e-35 153.7 200 60.0
CBR_g53494 Chara braunii HOM05D000188 ORTHO05D005876 6.5e-34 148.7 136 64.0
SMO340G0272 Selaginella moellendorffii HOM05D001765 ORTHO05D005876 3.2e-33 146.4 130 62.3
Zm00001eb091100 Zea mays HOM05D001765 ORTHO05D005876 6.7e-31 138.7 118 64.4
Zm00001eb276930 Zea mays HOM05D001765 ORTHO05D005876 1.9e-30 137.1 99 74.7
SEGI_08255 Sequoiadendron giganteum HOM05D001765 ORTHO05D005876 2.0e-27 127.1 112 64.3
HanXRQChr13g0395311 Helianthus annuus HOM05D001765 ORTHO05D005876 2.9e-26 123.2 144 52.1
GSVIVG01035017001 Vitis vinifera HOM05D001765 ORTHO05D005876 3.8e-26 122.9 86 84.9
Lsat_1_v5_gn_6_18261 Lactuca sativa HOM05D001765 ORTHO05D005876 2.5e-25 120.2 147 52.4
ATR1159G054 Amborella trichopoda HOM05D001765 ORTHO05D005876 1.2e-24 117.9 79 69.6
CAN.G197.3 Capsicum annuum HOM05D001765 ORTHO05D005876 1.5e-22 110.9 75 82.7
ECA233G0063 Erigeron canadensis HOM05D001765 ORTHO05D005876 7.4e-22 108.6 144 51.4
Zm00001eb408400 Zea mays HOM05D001765 ORTHO05D005876 1.8e-20 104.0 83 72.3
Medtr1g032030 Medicago truncatula HOM05D001765 ORTHO05D005876 2.0e-19 100.5 69 82.6
Medtr1g032370 Medicago truncatula HOM05D001765 ORTHO05D005876 2.0e-19 100.5 69 82.6
ATR1159G071 Amborella trichopoda HOM05D001765 ORTHO05D005876 2.2e-13 80.5 66 80.3
ATR1159G066 Amborella trichopoda HOM05D001765 ORTHO05D005876 1.8e-12 77.4 64 78.1
Dinv15195 Davidia involucrata HOM05D002174 ORTHO05D005447 1.7e-10 70.9 47 76.6
Cre12.g529200 Chlamydomonas reinhardtii HOM05D001765 ORTHO05D005876 1.1e-06 58.2 60 46.7


User provided reference genes

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