Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000456g0110 Nicotiana tabacum HOM05D005279 ORTHO05D006757 3.7e-72 274.6 126 100.0
Nitab4.5_0000276g0080 Nicotiana tabacum HOM05D005279 ORTHO05D006757 1.2e-70 269.6 126 97.6
Solyc04g051310.4 Solanum lycopersicum HOM05D005279 ORTHO05D006757 6.3e-64 247.3 124 89.5
Sopen04g022730 Solanum pennellii HOM05D005279 ORTHO05D006757 6.3e-64 247.3 124 89.5
Peaxi162Scf00994g00010 Petunia axillaris HOM05D005279 ORTHO05D006757 1.5e-52 209.5 115 79.1
Cc09_g03410 Coffea canephora HOM05D005279 ORTHO05D006757 5.0e-45 184.5 125 71.2
Dinv29119 Davidia involucrata HOM05D005279 ORTHO05D006757 2.8e-43 178.7 123 68.3
Nn1g08317 Nelumbo nucifera HOM05D005279 ORTHO05D006757 3.1e-42 175.3 123 69.9
Rhsim09G0131400 Rhododendron simsii HOM05D005279 ORTHO05D006757 8.9e-42 173.7 124 67.7
Ciclev10011262m.g Citrus clementina HOM05D005279 ORTHO05D006757 3.4e-41 171.8 124 62.1
vmacro10395 Vaccinium macrocarpon HOM05D005279 ORTHO05D006757 7.5e-41 170.6 125 65.6
TWI23G0564 Tripterygium wilfordii HOM05D005279 ORTHO05D006757 9.8e-41 170.2 124 66.1
Duzib128G1767 Durio zibethinus HOM05D005279 ORTHO05D006757 1.3e-40 169.9 122 63.1
CSS0033137 Camellia sinensis var. sinensis HOM05D005279 ORTHO05D006757 2.9e-40 168.7 123 66.7
CSS0033709 Camellia sinensis var. sinensis HOM05D005279 ORTHO05D006757 2.9e-40 168.7 123 66.7
Duzib177G0028 Durio zibethinus HOM05D005279 ORTHO05D006757 4.9e-40 167.9 122 62.3
Lalb_Chr19g0126771 Lupinus albus HOM05D005279 ORTHO05D006757 4.9e-40 167.9 124 62.9
TAR633G0866 Trochodendron aralioides HOM05D005279 ORTHO05D006757 8.3e-40 167.2 126 65.1
arahy.Tifrunner.gnm1.ann1.X9YPPN Arachis hypogaea HOM05D005279 ORTHO05D006757 1.1e-39 166.8 122 60.7
Glyma.18G240300 Glycine max HOM05D005279 ORTHO05D006757 1.1e-39 166.8 122 59.8
Glyma.09G252300 Glycine max HOM05D005279 ORTHO05D006757 1.4e-39 166.4 122 59.8
Cfa006283 Carpinus fangiana HOM05D005279 ORTHO05D006757 1.9e-39 166.0 124 63.7
MELO3C008759.2 Cucumis melo HOM05D005279 ORTHO05D006757 1.9e-39 166.0 124 64.5
CsaV3_2G009490 Cucumis sativus L. HOM05D005279 ORTHO05D006757 1.9e-39 166.0 124 64.5
PGR031G1864 Punica granatum HOM05D005279 ORTHO05D006757 1.9e-39 166.0 124 62.1
Oeu010147.1 Olea europaea HOM05D005279 ORTHO05D006757 4.1e-39 164.9 127 66.1
AUR62000356 Chenopodium quinoa HOM05D005279 ORTHO05D006757 5.4e-39 164.5 122 64.8
COL.COLO4_19830 Corchorus olitorius HOM05D005279 ORTHO05D006757 5.4e-39 164.5 122 59.8
Sc09g0001590 Simmondsia chinensis HOM05D005279 ORTHO05D006757 7.1e-39 164.1 126 62.7
ClCG11G011000 Citrullus lanatus HOM05D005279 ORTHO05D006757 9.2e-39 163.7 124 62.9
MSTRG.320 Avicennia marina HOM05D005279 ORTHO05D006757 1.6e-38 162.9 126 61.1
Cpa.g.c32193 Carica papaya HOM05D005279 ORTHO05D006757 1.6e-38 162.9 124 62.1
PSO675G1387 Papaver somniferum HOM05D005279 ORTHO05D006757 1.6e-38 162.9 126 63.5
Ca_07964_v3 Cicer arietinum L. HOM05D005279 ORTHO05D006757 2.1e-38 162.5 124 58.1
Eucgr.H01378 Eucalyptus grandis HOM05D005279 ORTHO05D006757 2.1e-38 162.5 124 58.9
Gohir.A08G223900 Gossypium hirsutum HOM05D005279 ORTHO05D006757 2.1e-38 162.5 122 59.8
THA.LOC104802949 Tarenaya hassleriana HOM05D005279 ORTHO05D006757 2.1e-38 162.5 124 60.5
Gohir.D08G244200 Gossypium hirsutum HOM05D005279 ORTHO05D006757 2.7e-38 162.2 122 59.8
Sed0005684 Sechium edule HOM05D005279 ORTHO05D006757 2.7e-38 162.2 125 62.4
Aa31LG11G13130 Aethionema arabicum HOM05D005279 ORTHO05D006757 4.6e-38 161.4 124 60.5
Ah.04g158770 Amaranthus hybridus HOM05D005279 ORTHO05D006757 4.6e-38 161.4 126 62.7
FAN02G0830 Fragaria x ananassa HOM05D005279 ORTHO05D006757 6.0e-38 161.0 125 59.2
FAN05G0195 Fragaria x ananassa HOM05D005279 ORTHO05D006757 6.0e-38 161.0 125 59.2
FAN09G4620 Fragaria x ananassa HOM05D005279 ORTHO05D006757 6.0e-38 161.0 125 59.2
FvH4_6g00750 Fragaria vesca HOM05D005279 ORTHO05D006757 7.8e-38 160.6 125 58.4
FAN14G2044 Fragaria x ananassa HOM05D005279 ORTHO05D006757 7.8e-38 160.6 125 58.4
RcHm_v2.0_Chr3g0448231 Rosa chinensis HOM05D005279 ORTHO05D006757 7.8e-38 160.6 125 59.2
VMungo1383G2490 Vigna mungo HOM05D005279 ORTHO05D006757 1.0e-37 160.2 122 58.2
Lj1A580T7 Lonicera japonica HOM05D005279 ORTHO05D006757 1.3e-37 159.8 123 63.4
Lju5221C0T3 Lonicera japonica HOM05D005279 ORTHO05D006757 1.3e-37 159.8 123 63.4
Phvul.008G055900 Phaseolus vulgaris HOM05D005279 ORTHO05D006757 1.3e-37 159.8 122 58.2
Migut.F01884 Erythranthe guttata HOM05D005279 ORTHO05D006757 1.7e-37 159.5 128 63.3
Atru.chr12.2109 Acer truncatum HOM05D005279 ORTHO05D006757 3.9e-37 158.3 124 61.3
Medtr7g079510 Medicago truncatula HOM05D005279 ORTHO05D006757 3.9e-37 158.3 124 56.5
CANSAT54G1354 Cannabis sativa HOM05D005279 ORTHO05D006757 5.1e-37 157.9 125 58.4
CiPaw.08G116500 Carya illinoinensis HOM05D005279 ORTHO05D006757 5.1e-37 157.9 122 63.9
EL10Ac4g09419 Beta vulgaris HOM05D005279 ORTHO05D006757 6.6e-37 157.5 123 61.8
Gorai.004G260500 Gossypium raimondii HOM05D005279 ORTHO05D006757 6.6e-37 157.5 122 59.0
SalBow6G4947 Salvia bowleyana HOM05D005279 ORTHO05D006757 1.1e-36 156.8 126 65.1
MD12G1258400 Malus domestica HOM05D005279 ORTHO05D006757 1.5e-36 156.4 125 59.2
Aqoxy2G03953 Aquilegia oxysepala HOM05D005279 ORTHO05D006757 1.9e-36 156.0 128 60.2
Haze_04526 Corylus avellana HOM05D005279 ORTHO05D006757 1.9e-36 156.0 124 60.5
Manes.09G184200 Manihot esculenta HOM05D005279 ORTHO05D006757 1.9e-36 156.0 122 61.5
Prupe.6G359100 Prunus persica HOM05D005279 ORTHO05D006757 1.9e-36 156.0 126 61.1
CARHR196710 Cardamine hirsuta HOM05D005279 ORTHO05D006757 2.5e-36 155.6 124 59.7
Oeu040486.2 Olea europaea HOM05D005279 ORTHO05D006757 2.5e-36 155.6 127 62.2
Hund07324 Selenicereus undatus HOM05D005279 ORTHO05D006757 4.3e-36 154.8 128 58.6
Actinidia34772 Actinidia chinensis HOM05D005279 ORTHO05D006757 9.5e-36 153.7 124 60.5
SGA_v2.0_scaffold122G33172 Striga asiatica HOM05D005279 ORTHO05D006757 9.5e-36 153.7 126 62.7
Lj1g0001090 Lotus japonicus HOM05D005279 ORTHO05D006757 2.1e-35 152.5 122 58.2
AT5G16520 Arabidopsis thaliana HOM05D005279 ORTHO05D006757 2.8e-35 152.1 124 57.3
Carub.0006s1472 Capsella rubella HOM05D005279 ORTHO05D006757 2.8e-35 152.1 124 58.1
unitig_26.g8932 Utricularia gibba HOM05D005279 ORTHO05D006757 3.6e-35 151.8 126 60.3
HanXRQChr05g0156961 Helianthus annuus HOM05D005279 ORTHO05D006757 4.7e-35 151.4 129 56.6
Hund29802 Selenicereus undatus HOM05D005279 ORTHO05D006757 4.7e-35 151.4 126 58.7
Hund29803 Selenicereus undatus HOM05D005279 ORTHO05D006757 4.7e-35 151.4 126 58.7
AL6G27470 Arabidopsis lyrata HOM05D005279 ORTHO05D006757 6.2e-35 151.0 124 57.3
Lsat_1_v5_gn_9_48740 Lactuca sativa HOM05D005279 ORTHO05D006757 6.2e-35 151.0 127 59.1
Thhalv10012976m.g Eutrema salsugineum HOM05D005279 ORTHO05D006757 8.1e-35 150.6 124 56.5
SHI13733 Sapria himalayana HOM05D005279 ORTHO05D006757 1.1e-34 150.2 123 58.5
Sp6g27630 Schrenkiella parvula HOM05D005279 ORTHO05D006757 1.1e-34 150.2 124 57.3
TPR.G32005 Trifolium pratense HOM05D005279 ORTHO05D006757 1.1e-34 150.2 124 55.6
A03p07830 Brassica napus HOM05D005279 ORTHO05D006757 1.4e-34 149.8 124 55.6
BolC3t13400H Brassica oleracea HOM05D005279 ORTHO05D006757 1.4e-34 149.8 124 55.6
C03p09050 Brassica napus HOM05D005279 ORTHO05D006757 3.1e-34 148.7 124 55.6
Sed0008551 Sechium edule HOM05D005279 ORTHO05D006757 2.0e-33 146.0 124 54.0
Potri.013G087400 Populus trichocarpa HOM05D005279 ORTHO05D006757 4.9e-32 141.4 127 54.3
Lsat_1_v5_gn_8_2100 Lactuca sativa HOM05D005279 ORTHO05D006757 6.4e-32 141.0 127 56.7
THA.LOC104827466 Tarenaya hassleriana HOM05D005279 ORTHO05D006757 2.4e-31 139.0 113 58.4
Sabra13G0070000 Salix brachista HOM05D005279 ORTHO05D006757 4.1e-31 138.3 127 52.8
DCAR_023849 Daucus carota HOM05D005279 ORTHO05D006757 9.2e-31 137.1 129 51.2
MBI07_g25290_MAGBIO Magnolia biondii HOM05D005279 ORTHO05D006757 2.1e-30 136.0 126 53.2
ATR0609G131 Amborella trichopoda HOM05D005279 ORTHO05D006757 5.1e-29 131.3 124 52.4
BcaB01g04978 Brassica carinata HOM05D005279 ORTHO05D006757 5.1e-29 131.3 124 53.2
HanXRQChr11g0323931 Helianthus annuus HOM05D005279 ORTHO05D006757 2.8e-27 125.6 127 52.8
HPP92_021393 Vanilla planifolia HOM05D005279 ORTHO05D006757 2.6e-25 119.0 129 47.3
SEGI_07718 Sequoiadendron giganteum HOM05D005279 ORTHO05D006757 5.4e-23 111.3 123 44.7
Hma1.2p1_0171F.1_g075730 Hydrangea macrophylla HOM05D005279 ORTHO05D006757 1.2e-22 110.2 91 60.4
Hund16011 Selenicereus undatus HOM05D005279 ORTHO05D006757 9.6e-20 100.5 127 42.5
HPP92_025240 Vanilla planifolia HOM05D005279 ORTHO05D006757 2.8e-19 99.0 125 42.4
AagrBONN_evm.TU.Sc2ySwM_228.5255 Anthoceros agrestis HOM05D005279 ORTHO05D006757 1.8e-18 96.3 125 39.2
arahy.Tifrunner.gnm1.ann1.GMHU8S Arachis hypogaea HOM05D005279 ORTHO05D006757 1.7e-16 89.7 82 50.0
CDE09G0872 Ceratophyllum demersum HOM05D005279 ORTHO05D006757 1.6e-14 83.2 91 47.3
Zm00001eb017080 Zea mays HOM05D005279 ORTHO05D006757 1.6e-14 83.2 123 42.3
GSVIVG01019132001 Vitis vinifera HOM05D005279 ORTHO05D006757 3.5e-14 82.0 44 75.0
Os01g0100500 Oryza sativa ssp. japonica HOM05D005279 ORTHO05D006757 1.0e-13 80.5 117 40.2
ECA233G5391 Erigeron canadensis HOM05D005279 ORTHO05D006757 2.8e-11 72.4 45 68.9
Zm00001eb334030 Zea mays HOM05D005279 ORTHO05D006757 6.2e-11 71.2 134 38.8
ECA232G1216 Erigeron canadensis HOM05D005279 ORTHO05D006757 8.1e-11 70.9 44 63.6
AUR62012181 Chenopodium quinoa HOM05D005279 ORTHO05D006757 8.4e-08 60.8 40 55.0


User provided reference genes

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