Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000456g0100 Nicotiana tabacum HOM05D005279 ORTHO05D006757 8.0e-302 1039.6 530 100.0
Nitab4.5_0000276g0070 Nicotiana tabacum HOM05D005279 ORTHO05D006757 2.5e-287 991.5 522 96.6
Solyc04g051310.4 Solanum lycopersicum HOM05D005279 ORTHO05D006757 3.8e-251 871.3 535 82.6
Sopen04g022730 Solanum pennellii HOM05D005279 ORTHO05D006757 1.1e-250 869.8 535 82.4
Peaxi162Scf00994g00010 Petunia axillaris HOM05D005279 ORTHO05D006757 9.3e-250 866.7 522 85.1
CAN.G29.21 Capsicum annuum HOM05D005279 ORTHO05D006757 1.6e-180 636.7 339 91.7
Rhsim09G0131400 Rhododendron simsii HOM05D005279 ORTHO05D006757 7.8e-172 607.8 529 59.7
Atru.chr12.2109 Acer truncatum HOM05D005279 ORTHO05D006757 9.8e-167 590.9 523 58.5
vmacro10395 Vaccinium macrocarpon HOM05D005279 ORTHO05D006757 1.4e-165 587.0 530 58.3
Cc09_g03410 Coffea canephora HOM05D005279 ORTHO05D006757 9.2e-165 584.3 526 59.1
Potri.013G087400 Populus trichocarpa HOM05D005279 ORTHO05D006757 3.5e-164 582.4 530 57.5
MSTRG.320 Avicennia marina HOM05D005279 ORTHO05D006757 6.0e-164 581.6 521 59.7
TAR633G0866 Trochodendron aralioides HOM05D005279 ORTHO05D006757 2.0e-159 566.6 519 58.2
GSVIVG01019132001 Vitis vinifera HOM05D005279 ORTHO05D006757 4.4e-159 565.5 507 58.6
FvH4_6g00750 Fragaria vesca HOM05D005279 ORTHO05D006757 1.3e-158 563.9 527 57.9
FAN14G2044 Fragaria x ananassa HOM05D005279 ORTHO05D006757 1.3e-158 563.9 527 57.9
FAN09G4620 Fragaria x ananassa HOM05D005279 ORTHO05D006757 1.7e-158 563.5 529 57.7
FAN05G0195 Fragaria x ananassa HOM05D005279 ORTHO05D006757 8.3e-158 561.2 527 57.3
RcHm_v2.0_Chr3g0448231 Rosa chinensis HOM05D005279 ORTHO05D006757 1.9e-157 560.1 528 56.6
Ciclev10011262m.g Citrus clementina HOM05D005279 ORTHO05D006757 3.5e-156 555.8 524 57.4
Migut.F01884 Erythranthe guttata HOM05D005279 ORTHO05D006757 1.0e-155 554.3 516 56.0
Nn1g08317 Nelumbo nucifera HOM05D005279 ORTHO05D006757 3.0e-155 552.7 521 56.8
arahy.Tifrunner.gnm1.ann1.X9YPPN Arachis hypogaea HOM05D005279 ORTHO05D006757 8.6e-155 551.2 522 55.6
TWI23G0564 Tripterygium wilfordii HOM05D005279 ORTHO05D006757 1.9e-154 550.1 528 54.7
CiPaw.08G116500 Carya illinoinensis HOM05D005279 ORTHO05D006757 2.5e-154 549.7 522 56.1
MD12G1258400 Malus domestica HOM05D005279 ORTHO05D006757 5.6e-154 548.5 528 56.4
Glyma.18G240300 Glycine max HOM05D005279 ORTHO05D006757 7.3e-154 548.1 515 55.5
Ca_07964_v3 Cicer arietinum L. HOM05D005279 ORTHO05D006757 3.6e-153 545.8 517 54.9
Glyma.09G252300 Glycine max HOM05D005279 ORTHO05D006757 3.1e-152 542.7 512 55.9
TPR.G32005 Trifolium pratense HOM05D005279 ORTHO05D006757 5.2e-152 542.0 524 54.2
Lj1g0001090 Lotus japonicus HOM05D005279 ORTHO05D006757 1.5e-151 540.4 522 55.0
AUR62000356 Chenopodium quinoa HOM05D005279 ORTHO05D006757 4.4e-151 538.9 523 54.7
Medtr7g079510 Medicago truncatula HOM05D005279 ORTHO05D006757 5.8e-151 538.5 525 54.3
Phvul.008G055900 Phaseolus vulgaris HOM05D005279 ORTHO05D006757 5.8e-151 538.5 513 55.0
Aqoxy2G03953 Aquilegia oxysepala HOM05D005279 ORTHO05D006757 9.9e-151 537.7 522 55.7
DCAR_023849 Daucus carota HOM05D005279 ORTHO05D006757 1.7e-150 537.0 517 54.9
ECA232G1216 Erigeron canadensis HOM05D005279 ORTHO05D006757 1.1e-149 534.3 518 56.0
Dinv09865 Davidia involucrata HOM05D005279 ORTHO05D006757 1.9e-149 533.5 447 62.9
Manes.09G184200 Manihot esculenta HOM05D005279 ORTHO05D006757 1.9e-149 533.5 530 53.2
VMungo1383G2490 Vigna mungo HOM05D005279 ORTHO05D006757 2.4e-149 533.1 524 54.4
Duzib177G0028 Durio zibethinus HOM05D005279 ORTHO05D006757 9.2e-149 531.2 524 55.0
Lalb_Chr19g0126771 Lupinus albus HOM05D005279 ORTHO05D006757 9.2e-149 531.2 520 53.7
Cfa006283 Carpinus fangiana HOM05D005279 ORTHO05D006757 2.1e-148 530.0 395 67.3
Prupe.6G359100 Prunus persica HOM05D005279 ORTHO05D006757 3.9e-147 525.8 400 65.2
Eucgr.H01378 Eucalyptus grandis HOM05D005279 ORTHO05D006757 4.3e-146 522.3 521 55.7
COL.COLO4_19830 Corchorus olitorius HOM05D005279 ORTHO05D006757 1.2e-145 520.8 523 52.8
PSO675G1387 Papaver somniferum HOM05D005279 ORTHO05D006757 1.2e-145 520.8 517 54.0
Lsat_1_v5_gn_9_48740 Lactuca sativa HOM05D005279 ORTHO05D006757 8.1e-145 518.1 515 55.0
arahy.Tifrunner.gnm1.ann1.GMHU8S Arachis hypogaea HOM05D005279 ORTHO05D006757 1.1e-144 517.7 478 55.6
EL10Ac4g09419 Beta vulgaris HOM05D005279 ORTHO05D006757 1.1e-144 517.7 515 54.0
Duzib128G1767 Durio zibethinus HOM05D005279 ORTHO05D006757 6.9e-144 515.0 522 54.4
Dinv29119 Davidia involucrata HOM05D005279 ORTHO05D006757 3.4e-143 512.7 333 76.0
PGR031G1864 Punica granatum HOM05D005279 ORTHO05D006757 1.3e-142 510.8 517 54.0
THA.LOC104802949 Tarenaya hassleriana HOM05D005279 ORTHO05D006757 2.9e-142 509.6 519 51.3
Psat3g104240 Pisum sativum HOM05D005279 ORTHO05D006757 6.4e-142 508.4 482 54.4
Hund29802 Selenicereus undatus HOM05D005279 ORTHO05D006757 7.8e-140 501.5 395 62.5
AUR62006699 Chenopodium quinoa HOM05D005279 ORTHO05D006757 1.0e-139 501.1 482 53.3
Hund29803 Selenicereus undatus HOM05D005279 ORTHO05D006757 1.0e-139 501.1 395 62.5
Gohir.A08G223900 Gossypium hirsutum HOM05D005279 ORTHO05D006757 3.0e-139 499.6 517 52.0
HanXRQChr05g0156961 Helianthus annuus HOM05D005279 ORTHO05D006757 3.0e-139 499.6 518 53.9
Thhalv10012976m.g Eutrema salsugineum HOM05D005279 ORTHO05D006757 3.3e-138 496.1 519 52.6
HanXRQChr11g0323931 Helianthus annuus HOM05D005279 ORTHO05D006757 3.3e-138 496.1 519 51.4
THA.LOC104827466 Tarenaya hassleriana HOM05D005279 ORTHO05D006757 5.6e-138 495.4 518 50.2
unitig_26.g8932 Utricularia gibba HOM05D005279 ORTHO05D006757 7.3e-138 495.0 510 54.5
Gorai.004G260500 Gossypium raimondii HOM05D005279 ORTHO05D006757 1.6e-137 493.8 515 52.6
Gohir.D08G244200 Gossypium hirsutum HOM05D005279 ORTHO05D006757 2.1e-137 493.4 515 52.6
Sabra13G0070000 Salix brachista HOM05D005279 ORTHO05D006757 2.1e-137 493.4 538 50.9
SalBow6G4947 Salvia bowleyana HOM05D005279 ORTHO05D006757 2.8e-137 493.0 416 60.1
Sed0005684 Sechium edule HOM05D005279 ORTHO05D006757 2.8e-137 493.0 521 50.5
ECA233G5391 Erigeron canadensis HOM05D005279 ORTHO05D006757 4.8e-137 492.3 519 53.0
MELO3C008759.2 Cucumis melo HOM05D005279 ORTHO05D006757 1.1e-136 491.1 525 50.5
Aa31LG11G13130 Aethionema arabicum HOM05D005279 ORTHO05D006757 1.4e-136 490.7 513 51.1
Lsat_1_v5_gn_8_2100 Lactuca sativa HOM05D005279 ORTHO05D006757 1.8e-136 490.3 525 52.0
AT5G16520 Arabidopsis thaliana HOM05D005279 ORTHO05D006757 4.0e-136 489.2 518 51.5
CsaV3_2G009490 Cucumis sativus L. HOM05D005279 ORTHO05D006757 4.0e-136 489.2 522 51.0
A03p07830 Brassica napus HOM05D005279 ORTHO05D006757 5.3e-136 488.8 524 52.3
Carub.0006s1472 Capsella rubella HOM05D005279 ORTHO05D006757 2.0e-135 486.9 514 50.6
AL6G27470 Arabidopsis lyrata HOM05D005279 ORTHO05D006757 1.7e-134 483.8 517 51.3
CARHR196710 Cardamine hirsuta HOM05D005279 ORTHO05D006757 4.9e-134 482.3 528 50.4
ClCG11G011000 Citrullus lanatus HOM05D005279 ORTHO05D006757 8.4e-134 481.5 495 51.9
BcaB01g04978 Brassica carinata HOM05D005279 ORTHO05D006757 1.1e-133 481.1 522 52.7
BolC3t13400H Brassica oleracea HOM05D005279 ORTHO05D006757 3.2e-133 479.6 522 52.3
C03p09050 Brassica napus HOM05D005279 ORTHO05D006757 4.2e-133 479.2 522 52.3
Hund07324 Selenicereus undatus HOM05D005279 ORTHO05D006757 1.2e-132 477.6 575 48.0
Sc09g0001590 Simmondsia chinensis HOM05D005279 ORTHO05D006757 1.6e-132 477.2 333 68.5
PGSC0003DMG402016935 Solanum tuberosum HOM05D005279 ORTHO05D006757 1.0e-131 474.6 278 84.2
Ah.04g158770 Amaranthus hybridus HOM05D005279 ORTHO05D006757 3.9e-131 472.6 522 49.6
Sp6g27630 Schrenkiella parvula HOM05D005279 ORTHO05D006757 6.7e-131 471.9 530 49.8
SGA_v2.0_scaffold122G33172 Striga asiatica HOM05D005279 ORTHO05D006757 3.1e-128 463.0 427 56.0
Sed0008551 Sechium edule HOM05D005279 ORTHO05D006757 4.0e-128 462.6 409 57.7
BraA03t10110Z Brassica rapa HOM05D005279 ORTHO05D006757 3.8e-126 456.1 482 52.5
FAN02G0830 Fragaria x ananassa HOM05D005279 ORTHO05D006757 1.0e-123 448.0 548 48.9
Thecc.05G206100 Theobroma cacao HOM05D005279 ORTHO05D006757 5.6e-122 442.2 457 51.9
ATR0609G131 Amborella trichopoda HOM05D005279 ORTHO05D006757 2.1e-121 440.3 404 55.7
Lj1A580T7 Lonicera japonica HOM05D005279 ORTHO05D006757 1.9e-117 427.2 417 54.7
Oeu010147.1 Olea europaea HOM05D005279 ORTHO05D006757 1.5e-114 417.5 277 73.3
CDE09G0872 Ceratophyllum demersum HOM05D005279 ORTHO05D006757 1.9e-114 417.2 531 45.4
Oeu040486.2 Olea europaea HOM05D005279 ORTHO05D006757 9.7e-114 414.8 277 72.6
PGSC0003DMG401016935 Solanum tuberosum HOM05D005279 ORTHO05D006757 1.2e-111 407.9 257 82.5
CANSAT54G1354 Cannabis sativa HOM05D005279 ORTHO05D006757 4.5e-111 406.0 292 68.2
Haze_04526 Corylus avellana HOM05D005279 ORTHO05D006757 2.9e-110 403.3 277 70.4
QL01p050313 Quercus lobata HOM05D005279 ORTHO05D006757 5.5e-109 399.1 277 70.8
CSS0033137 Camellia sinensis var. sinensis HOM05D005279 ORTHO05D006757 2.7e-108 396.7 284 67.6
CSS0033709 Camellia sinensis var. sinensis HOM05D005279 ORTHO05D006757 2.7e-108 396.7 284 67.6
SEGI_07718 Sequoiadendron giganteum HOM05D005279 ORTHO05D006757 5.7e-106 389.0 345 54.2
MBI07_g25290_MAGBIO Magnolia biondii HOM05D005279 ORTHO05D006757 4.5e-103 379.4 441 47.6
Cpa.g.c32193 Carica papaya HOM05D005279 ORTHO05D006757 1.9e-101 374.0 277 66.4
Os01g0100500 Oryza sativa ssp. japonica HOM05D005279 ORTHO05D006757 3.2e-101 373.2 346 52.6
Zm00001eb017080 Zea mays HOM05D005279 ORTHO05D006757 3.3e-98 363.2 347 52.2
Zm00001eb334030 Zea mays HOM05D005279 ORTHO05D006757 3.3e-98 363.2 346 51.2
Hund16011 Selenicereus undatus HOM05D005279 ORTHO05D006757 1.4e-93 347.8 379 46.7
Actinidia38912 Actinidia chinensis HOM05D005279 ORTHO05D006757 3.2e-93 346.7 341 54.5
CDE02G4206 Ceratophyllum demersum HOM05D005279 ORTHO05D006757 5.2e-91 339.3 268 59.0
AUR62012181 Chenopodium quinoa HOM05D005279 ORTHO05D006757 2.8e-89 333.6 335 50.4
SHI13733 Sapria himalayana HOM05D005279 ORTHO05D006757 1.3e-86 324.7 404 47.8
Lju5221C0T3 Lonicera japonica HOM05D005279 ORTHO05D006757 1.4e-83 314.7 292 55.8
EL10Ac2g04762 Beta vulgaris HOM05D005279 ORTHO05D006757 5.7e-74 282.7 280 50.7
AagrBONN_evm.TU.Sc2ySwM_228.5255 Anthoceros agrestis HOM05D005279 ORTHO05D006757 5.9e-71 272.7 545 32.5
RcHm_v2.0_Chr2g0115301 Rosa chinensis HOM05D005279 ORTHO05D006757 9.2e-64 248.8 159 72.3
AUR62022817 Chenopodium quinoa HOM05D005279 ORTHO05D006757 5.6e-61 239.6 341 39.3
HPP92_021393 Vanilla planifolia HOM05D005279 ORTHO05D006757 1.2e-60 238.4 378 38.1
CDE12G0554 Ceratophyllum demersum HOM05D005279 ORTHO05D006757 6.0e-55 219.5 184 57.6
RcHm_v2.0_Chr7g0239281 Rosa chinensis HOM05D005279 ORTHO05D006757 3.1e-51 207.2 132 71.2
HPP92_025240 Vanilla planifolia HOM05D005279 ORTHO05D006757 4.0e-51 206.8 277 42.6
Ah.16g102880 Amaranthus hybridus HOM05D005279 ORTHO05D006757 6.4e-49 199.5 195 47.2
MD04G1241700 Malus domestica HOM05D005279 ORTHO05D006757 3.7e-41 173.7 251 45.0
Lju5221A0T19 Lonicera japonica HOM05D005279 ORTHO05D006757 1.5e-34 151.8 141 57.4
QL01p050319 Quercus lobata HOM05D005279 ORTHO05D006757 5.4e-32 143.3 124 61.3
CSS0049023 Camellia sinensis var. sinensis HOM05D005279 ORTHO05D006757 9.2e-32 142.5 220 40.5
Haze_04527 Corylus avellana HOM05D005279 ORTHO05D006757 1.8e-27 128.3 221 37.6
Oeu010148.1 Olea europaea HOM05D005279 ORTHO05D006757 4.5e-18 97.1 149 42.3
SEGI_28852 Sequoiadendron giganteum HOM05D005279 ORTHO05D006757 7.9e-15 86.3 69 60.9
HPP92_025241 Vanilla planifolia HOM05D005279 ORTHO05D006757 9.9e-10 69.3 68 47.1


User provided reference genes

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