Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000446g0120 Nicotiana tabacum HOM05D007692 ORTHO05D009696 3.5e-92 341.7 178 100.0
Nitab4.5_0008422g0010 Nicotiana tabacum HOM05D007692 ORTHO05D009696 3.4e-87 325.1 178 94.4
PGSC0003DMG400045083 Solanum tuberosum HOM05D007692 ORTHO05D009696 1.1e-82 310.1 178 91.6
Peaxi162Scf00486g00102 Petunia axillaris HOM05D007692 ORTHO05D009696 9.5e-82 307.0 178 89.3
Sopen08g017100 Solanum pennellii HOM05D007692 ORTHO05D009696 6.8e-80 300.8 178 89.3
Solyc08g061640.1 Solanum lycopersicum HOM05D007692 ORTHO05D009696 1.7e-78 296.2 178 88.2
CAN.G567.82 Capsicum annuum HOM05D007692 ORTHO05D009696 1.2e-76 290.0 175 85.1
Manes.16G085800 Manihot esculenta HOM05D007692 ORTHO05D009696 5.7e-34 148.3 176 47.2
Duzib168G1711 Durio zibethinus HOM05D007692 ORTHO05D009696 6.3e-33 144.8 190 46.8
Dinv22937 Davidia involucrata HOM05D007692 ORTHO05D009696 3.1e-32 142.5 190 47.9
COL.COLO4_21142 Corchorus olitorius HOM05D007692 ORTHO05D009696 6.9e-32 141.4 173 45.1
Thecc.09G063700 Theobroma cacao HOM05D007692 ORTHO05D009696 6.9e-32 141.4 188 43.6
Hma1.2p1_0278F.1_g111850 Hydrangea macrophylla HOM05D007692 ORTHO05D009696 1.1e-29 134.0 107 65.4
Oeu003971.1 Olea europaea HOM05D007692 ORTHO05D009696 3.6e-28 129.0 100 61.0
Prupe.1G403900 Prunus persica HOM05D007692 ORTHO05D009696 1.8e-27 126.7 106 62.3
MD08G1071600 Malus domestica HOM05D007692 ORTHO05D009696 3.9e-27 125.6 111 58.6
Cpa.g.sc126.21 Carica papaya HOM05D007692 ORTHO05D009696 1.1e-26 124.0 110 57.3
MD15G1049600 Malus domestica HOM05D007692 ORTHO05D009696 1.1e-26 124.0 111 59.5
Nn2g12400 Nelumbo nucifera HOM05D007692 ORTHO05D009696 2.5e-26 122.9 98 61.2
Haze_18297 Corylus avellana HOM05D007692 ORTHO05D009696 1.7e-25 120.2 101 63.4
Gohir.D05G040100 Gossypium hirsutum HOM05D007692 ORTHO05D009696 1.7e-25 120.2 188 41.0
Gorai.009G040500 Gossypium raimondii HOM05D007692 ORTHO05D009696 1.7e-25 120.2 188 41.0
Potri.006G220500 Populus trichocarpa HOM05D007692 ORTHO05D009696 4.8e-25 118.6 101 58.4
DCAR_001232 Daucus carota HOM05D006390 ORTHO05D007899 6.3e-25 118.2 97 59.8
RcHm_v2.0_Chr6g0311901 Rosa chinensis HOM05D007692 ORTHO05D009696 1.1e-24 117.5 101 60.4
Sabra06G0170400 Salix brachista HOM05D007692 ORTHO05D009696 1.1e-24 117.5 93 60.2
QL02p017055 Quercus lobata HOM05D007692 ORTHO05D009696 1.4e-24 117.1 109 56.0
SalBow4G0926 Salvia bowleyana HOM05D007692 ORTHO05D009696 1.8e-24 116.7 101 54.5
Gohir.A05G038600 Gossypium hirsutum HOM05D007692 ORTHO05D009696 5.3e-24 115.2 188 41.0
SGA_v2.0_scaffold20G09157 Striga asiatica HOM05D006390 ORTHO05D007899 6.9e-24 114.8 102 58.8
QL02p017043 Quercus lobata HOM05D007692 ORTHO05D009696 1.2e-23 114.0 109 55.0
TAR624G0897 Trochodendron aralioides HOM05D007692 ORTHO05D009696 1.2e-23 114.0 97 56.7
FvH4_2g30960 Fragaria vesca HOM05D007692 ORTHO05D009696 1.5e-23 113.6 111 54.1
EL10Ac2g03778 Beta vulgaris HOM05D007692 ORTHO05D009696 5.9e-23 111.7 102 55.9
CSS0041722 Camellia sinensis var. sinensis HOM05D007692 ORTHO05D009696 5.9e-23 111.7 89 60.7
PGR031G0311 Punica granatum HOM05D007692 ORTHO05D009696 2.9e-22 109.4 95 60.0
Cfa017868 Carpinus fangiana HOM05D007692 ORTHO05D009696 3.8e-22 109.0 101 59.4
unitig_32.g11527 Utricularia gibba HOM05D007692 ORTHO05D009696 3.8e-22 109.0 104 51.9
CiPaw.15G091700 Carya illinoinensis HOM05D007692 ORTHO05D009696 5.0e-22 108.6 111 50.5
CANSAT25G1329 Cannabis sativa HOM05D007692 ORTHO05D009696 1.9e-21 106.7 98 55.1
Eucgr.C00729 Eucalyptus grandis HOM05D007692 ORTHO05D009696 1.9e-21 106.7 108 51.9
ClCG05G015760 Citrullus lanatus HOM05D007692 ORTHO05D009696 2.5e-21 106.3 111 53.2
MELO3C016914.2 Cucumis melo HOM05D007692 ORTHO05D009696 2.5e-21 106.3 102 56.9
CsaV3_4G036060 Cucumis sativus L. HOM05D007692 ORTHO05D009696 2.5e-21 106.3 102 56.9
Nn8g39911 Nelumbo nucifera HOM05D007692 ORTHO05D009696 1.2e-20 104.0 99 58.6
Glyma.17G225900 Glycine max HOM05D007692 ORTHO05D009696 1.6e-20 103.6 110 51.8
THA.LOC104810956 Tarenaya hassleriana HOM05D007692 ORTHO05D009696 2.7e-20 102.8 111 46.8
Ciclev10010178m.g Citrus clementina HOM05D007692 ORTHO05D009696 4.7e-20 102.1 105 51.4
Glyma.06G056100 Glycine max HOM05D007692 ORTHO05D009696 1.4e-19 100.5 101 51.5
VMungo0647G2522 Vigna mungo HOM05D007692 ORTHO05D009696 1.8e-19 100.1 111 50.5
PSO541G2080 Papaver somniferum HOM05D007692 ORTHO05D009696 3.0e-19 99.4 103 50.5
ECA240G2866 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.1e-19 98.6 105 54.3
Medtr1g015470 Medicago truncatula HOM05D007692 ORTHO05D009696 1.1e-18 97.4 100 48.0
TPR.G3568 Trifolium pratense HOM05D007692 ORTHO05D009696 1.1e-18 97.4 112 46.4
HPP92_004156 Vanilla planifolia HOM05D007692 ORTHO05D009696 1.1e-18 97.4 93 48.4
PSO675G1902 Papaver somniferum HOM05D007692 ORTHO05D009696 2.0e-18 96.7 103 50.5
arahy.Tifrunner.gnm1.ann1.0E4SK3 Arachis hypogaea HOM05D007692 ORTHO05D009696 2.6e-18 96.3 101 49.5
Lsat_1_v5_gn_7_58320 Lactuca sativa HOM05D006390 ORTHO05D007899 2.6e-18 96.3 93 55.9
Psat6g022960 Pisum sativum HOM05D007692 ORTHO05D009696 2.6e-18 96.3 101 47.5
VMungo1309G1304 Vigna mungo HOM05D007692 ORTHO05D009696 3.3e-18 95.9 101 49.5
Lj5g0021751 Lotus japonicus HOM05D007692 ORTHO05D009696 4.4e-18 95.5 110 48.2
TPR.G38893 Trifolium pratense HOM05D007692 ORTHO05D009696 5.7e-18 95.1 110 43.6
Cc08_g01120 Coffea canephora HOM05D007692 ORTHO05D009696 7.4e-18 94.7 101 50.5
TWI63G1278 Tripterygium wilfordii HOM05D007692 ORTHO05D009696 1.3e-17 94.0 101 53.5
Sed0007061 Sechium edule HOM05D007692 ORTHO05D009696 1.7e-17 93.6 102 51.0
Phvul.009G082200 Phaseolus vulgaris HOM05D007692 ORTHO05D009696 2.8e-17 92.8 110 46.4
Sc06g0001120 Simmondsia chinensis HOM05D007692 ORTHO05D009696 4.8e-17 92.0 95 47.4
MBI13_g42817_MAGBIO Magnolia biondii HOM05D007692 ORTHO05D009696 6.3e-17 91.7 93 52.7
Ah.11g044290 Amaranthus hybridus HOM05D007692 ORTHO05D009696 8.2e-17 91.3 110 45.5
Aqoxy2G03896 Aquilegia oxysepala HOM05D007692 ORTHO05D009696 2.4e-16 89.7 104 48.1
A10p18810 Brassica napus HOM05D007692 ORTHO05D009696 2.4e-16 89.7 101 46.5
C09p54830 Brassica napus HOM05D007692 ORTHO05D009696 2.4e-16 89.7 101 46.5
BolC9t58343H Brassica oleracea HOM05D007692 ORTHO05D009696 2.4e-16 89.7 101 46.5
BraA10t43961Z Brassica rapa HOM05D007692 ORTHO05D009696 2.4e-16 89.7 101 46.5
CARHR191630 Cardamine hirsuta HOM05D007692 ORTHO05D009696 2.4e-16 89.7 95 49.5
BcaB08g36470 Brassica carinata HOM05D007692 ORTHO05D009696 4.1e-16 89.0 101 46.5
ATR0598G206 Amborella trichopoda HOM05D007692 ORTHO05D009696 5.3e-16 88.6 94 52.1
Phvul.001G038600 Phaseolus vulgaris HOM05D007692 ORTHO05D009696 9.1e-16 87.8 91 48.4
Zm00001eb005780 Zea mays HOM05D007692 ORTHO05D009696 3.4e-15 85.9 101 45.5
HanXRQChr03g0065641 Helianthus annuus HOM05D007692 ORTHO05D009696 5.9e-15 85.1 106 46.2
Psat5g030520 Pisum sativum HOM05D007692 ORTHO05D009696 7.7e-15 84.7 94 48.9
Thhalv10015977m.g Eutrema salsugineum HOM05D007692 ORTHO05D009696 1.0e-14 84.3 101 43.6
Medtr3g105090 Medicago truncatula HOM05D007692 ORTHO05D009696 2.2e-14 83.2 111 40.5
CDE04G2134 Ceratophyllum demersum HOM05D007692 ORTHO05D009696 3.8e-14 82.4 115 43.5
Lalb_Chr11g0063341 Lupinus albus HOM05D007692 ORTHO05D009696 3.2e-13 79.3 110 40.0
Medtr1g015490 Medicago truncatula HOM05D007692 ORTHO05D009696 9.4e-13 77.8 111 38.7
Carub.0006s1955 Capsella rubella HOM05D007692 ORTHO05D009696 1.4e-11 73.9 107 40.2
Os03g0176900 Oryza sativa ssp. japonica HOM05D007692 ORTHO05D009696 1.4e-11 73.9 100 40.0
Sp6g23280 Schrenkiella parvula HOM05D007692 ORTHO05D009696 1.4e-11 73.9 93 41.9
AT5G21910 Arabidopsis thaliana HOM05D007692 ORTHO05D009696 3.0e-11 72.8 107 40.2
Duzib150G0238 Durio zibethinus HOM05D007692 ORTHO05D009696 5.7e-10 68.6 123 41.5
Psat6g004480 Pisum sativum HOM05D007692 ORTHO05D009696 1.3e-09 67.4 67 52.2
Lj1g0020593 Lotus japonicus HOM05D007692 ORTHO05D009696 2.8e-09 66.2 111 36.9
Atru.chr7.1844 Acer truncatum HOM05D007692 ORTHO05D009696 4.1e-08 62.4 68 51.5
Carub.0005s0963 Capsella rubella HOM05D007692 ORTHO05D009696 4.1e-08 62.4 93 37.6
TAR624G1426 Trochodendron aralioides HOM05D000001 ORTHO05D000003 9.1e-08 61.2 63 46.0
Lalb_Chr14g0366461 Lupinus albus HOM05D007692 ORTHO05D009696 1.6e-07 60.5 78 41.0


User provided reference genes

Program Settings