Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000443g0190 Nicotiana tabacum HOM05D008006 ORTHO05D010181 3.5e-180 634.8 311 100.0
Nitab4.5_0000973g0020 Nicotiana tabacum HOM05D008006 ORTHO05D010181 5.4e-173 610.9 311 95.8
Sopen02g017480 Solanum pennellii HOM05D008006 ORTHO05D010181 6.8e-160 567.4 313 87.9
PGSC0003DMG401009429 Solanum tuberosum HOM05D008006 ORTHO05D010181 8.9e-160 567.0 313 88.2
CAN.G883.7 Capsicum annuum HOM05D008006 ORTHO05D010181 7.1e-157 557.4 312 87.5
Peaxi162Scf00981g00002 Petunia axillaris HOM05D008006 ORTHO05D010181 3.0e-155 552.0 311 86.2
Oeu023348.1 Olea europaea HOM05D008006 ORTHO05D010181 3.9e-115 418.7 307 66.8
Cc07_g12390 Coffea canephora HOM05D008006 ORTHO05D010181 3.7e-113 412.1 310 64.2
MSTRG.3655 Avicennia marina HOM05D008006 ORTHO05D010181 1.3e-110 403.7 283 70.0
Hma1.2p1_0085F.1_g044170 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 1.8e-107 393.3 319 63.6
Migut.K01160 Erythranthe guttata HOM05D008006 ORTHO05D010181 3.0e-107 392.5 284 69.4
Dinv19107 Davidia involucrata HOM05D008006 ORTHO05D007530 7.4e-106 387.9 304 63.5
Lsat_1_v5_gn_8_113701 Lactuca sativa HOM05D008006 ORTHO05D010181 1.7e-102 376.7 290 63.4
DCAR_005377 Daucus carota HOM05D008006 ORTHO05D010181 1.9e-101 373.2 299 61.9
SGA_v2.0_scaffold229G43287 Striga asiatica HOM05D008006 ORTHO05D010181 7.9e-100 367.9 305 61.6
unitig_0.g2635 Utricularia gibba HOM05D008006 ORTHO05D010181 1.8e-99 366.7 286 62.2
TAR376G0197 Trochodendron aralioides HOM05D008006 ORTHO05D010181 5.1e-99 365.2 293 63.5
MBI04_g23901_MAGBIO Magnolia biondii HOM05D008006 ORTHO05D010181 2.1e-92 343.2 283 60.1
CANSAT11G1793 Cannabis sativa HOM05D008006 ORTHO05D010181 3.6e-92 342.4 279 60.2
MELO3C010256.2 Cucumis melo HOM05D008006 ORTHO05D010181 1.8e-91 340.1 302 57.0
MD15G1157700 Malus domestica HOM05D008006 ORTHO05D010181 3.9e-91 339.0 276 60.5
Sed0023235 Sechium edule HOM05D008006 ORTHO05D010181 3.9e-91 339.0 286 60.8
CDE07G0801 Ceratophyllum demersum HOM05D008006 ORTHO05D010181 8.8e-91 337.8 284 56.7
CSS0020571 Camellia sinensis var. sinensis HOM05D008006 ORTHO05D010181 1.5e-90 337.0 311 57.2
ClCG06G012090 Citrullus lanatus HOM05D008006 ORTHO05D010181 2.0e-90 336.7 302 57.0
Prupe.7G252900 Prunus persica HOM05D008006 ORTHO05D010181 2.6e-90 336.3 276 60.5
CsaV3_1G028580 Cucumis sativus L. HOM05D008006 ORTHO05D010181 3.3e-90 335.9 283 59.7
Medtr1g052525 Medicago truncatula HOM05D008006 ORTHO05D010181 8.2e-89 331.3 286 57.7
Cfa020870 Carpinus fangiana HOM05D008006 ORTHO05D010181 2.4e-88 329.7 298 58.7
Haze_19299 Corylus avellana HOM05D008006 ORTHO05D010181 2.4e-88 329.7 294 59.5
Phvul.009G208600 Phaseolus vulgaris HOM05D008006 ORTHO05D010181 5.3e-88 328.6 283 58.7
QL02p091617 Quercus lobata HOM05D008006 ORTHO05D010181 7.0e-88 328.2 314 55.1
COL.COLO4_22070 Corchorus olitorius HOM05D008006 ORTHO05D010181 1.2e-87 327.4 304 56.9
Aqoxy6G02620 Aquilegia oxysepala HOM05D008006 ORTHO05D010181 1.6e-87 327.0 307 58.3
Duzib187G1563 Durio zibethinus HOM05D008006 ORTHO05D010181 2.6e-87 326.2 293 58.0
Gohir.A06G096100 Gossypium hirsutum HOM05D008006 ORTHO05D010181 1.7e-86 323.6 305 55.7
Cpa.g.sc46.96 Carica papaya HOM05D008006 ORTHO05D010181 3.8e-86 322.4 304 52.6
CiPaw.15G179000 Carya illinoinensis HOM05D008006 ORTHO05D010181 8.5e-86 321.2 292 58.6
Gorai.010G110900 Gossypium raimondii HOM05D008006 ORTHO05D010181 8.5e-86 321.2 288 57.6
Manes.14G140100 Manihot esculenta HOM05D008006 ORTHO05D010181 1.5e-85 320.5 277 58.8
Potri.018G112900 Populus trichocarpa HOM05D008006 ORTHO05D010181 1.9e-85 320.1 286 58.4
SalBow5G3372 Salvia bowleyana HOM05D008006 ORTHO05D010181 1.9e-85 320.1 301 58.1
VMungo1309G1328 Vigna mungo HOM05D008006 ORTHO05D010181 1.9e-85 320.1 277 58.1
RcHm_v2.0_Chr2g0086431 Rosa chinensis HOM05D008006 ORTHO05D010181 7.2e-85 318.2 276 58.7
Sabra18G0096000 Salix brachista HOM05D008006 ORTHO05D010181 2.7e-84 316.2 286 57.7
FAN28G2644 Fragaria x ananassa HOM05D008006 ORTHO05D010181 1.7e-81 307.0 276 57.2
FvH4_1g01510 Fragaria vesca HOM05D008006 ORTHO05D010181 2.2e-81 306.6 276 57.2
Thecc.09G037000 Theobroma cacao HOM05D008006 ORTHO05D010181 2.2e-81 306.6 293 55.3
PGR142G2664 Punica granatum HOM05D008006 ORTHO05D010181 6.3e-81 305.1 289 54.7
QL02p091673 Quercus lobata HOM05D008006 ORTHO05D010181 1.1e-80 304.3 291 55.3
EL10Ac6g14724 Beta vulgaris HOM05D008006 ORTHO05D010181 1.4e-80 303.9 283 56.2
Sc03g0006000 Simmondsia chinensis HOM05D008006 ORTHO05D010181 1.2e-79 300.8 298 52.0
Solyc02g068350.1 Solanum lycopersicum HOM05D008006 ORTHO05D010181 1.7e-78 297.0 171 83.6
FAN23G1450 Fragaria x ananassa HOM05D008006 ORTHO05D010181 1.9e-77 293.5 276 55.1
THA.LOC104827422 Tarenaya hassleriana HOM05D008006 ORTHO05D010181 7.2e-77 291.6 297 49.5
Ah.07g202950 Amaranthus hybridus HOM05D008006 ORTHO05D010181 2.1e-76 290.0 284 54.2
SEGI_07410 Sequoiadendron giganteum HOM05D008006 ORTHO05D010181 8.0e-76 288.1 287 52.6
AUR62016258 Chenopodium quinoa HOM05D008006 ORTHO05D010181 2.2e-73 280.0 254 57.9
HPP92_022771 Vanilla planifolia HOM05D008006 ORTHO05D010181 2.8e-73 279.6 289 51.9
ATR0605G334 Amborella trichopoda HOM05D008006 ORTHO05D010181 3.8e-70 269.2 283 50.5
Actinidia28771 Actinidia chinensis HOM05D008006 ORTHO05D010181 5.7e-66 255.4 206 59.2
Zm00001eb102080 Zea mays HOM05D008006 ORTHO05D010181 6.3e-65 251.9 291 48.5
Gohir.D06G096200 Gossypium hirsutum HOM05D008006 ORTHO05D010181 2.0e-58 230.3 219 54.8
Mapoly0054s0065 Marchantia polymorpha HOM05D008006 ORTHO05D010181 1.7e-57 227.3 284 45.1
HanXRQChr15g0486431 Helianthus annuus HOM05D008006 ORTHO05D010181 3.1e-51 206.5 162 60.5
AUR62003323 Chenopodium quinoa HOM05D002832 ORTHO05D007530 2.8e-44 183.3 134 65.7
Lalb_Chr11g0072821 Lupinus albus HOM05D008006 ORTHO05D010181 4.9e-41 172.6 118 72.0
SMO364G0826 Selaginella moellendorffii HOM05D008006 ORTHO05D010181 1.1e-32 144.8 194 44.3
Cre16.g675000 Chlamydomonas reinhardtii HOM05D008006 ORTHO05D010181 1.1e-24 118.2 307 34.9
AUR62043755 Chenopodium quinoa HOM05D008006 ORTHO05D010181 3.5e-23 113.2 82 65.9
CBR_g4365 Chara braunii HOM05D008006 ORTHO05D010181 4.8e-20 102.8 101 49.5
FAN26G1902 Fragaria x ananassa HOM05D008006 ORTHO05D010181 1.5e-18 97.8 119 46.2
Oeu046642.1 Olea europaea HOM05D008006 ORTHO05D010181 9.3e-16 88.6 104 48.1
Hma1.2p1_2924F.1_g330380 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 6.2e-12 75.9 44 70.5


User provided reference genes

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