Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000443g0160 Nicotiana tabacum HOM05D003807 ORTHO05D002847 4.5e-115 417.9 209 100.0
Nitab4.5_0008965g0010 Nicotiana tabacum HOM05D003807 ORTHO05D002847 7.0e-76 287.7 220 75.9
Peaxi162Scf00199g00093 Petunia axillaris HOM05D003807 ORTHO05D002847 1.5e-57 226.9 215 65.1
Peaxi162Scf00198g00104 Petunia axillaris HOM05D003807 ORTHO05D002847 2.3e-50 203.0 208 61.1
Nitab4.5_0002305g0070 Nicotiana tabacum HOM05D003807 ORTHO05D002847 1.6e-48 196.8 208 63.0
Peaxi162Scf00556g00041 Petunia axillaris HOM05D003807 ORTHO05D002847 8.9e-47 191.0 208 58.7
PGSC0003DMG400009434 Solanum tuberosum HOM05D003807 ORTHO05D002847 4.3e-41 172.2 210 55.2
Nitab4.5_0000138g0140 Nicotiana tabacum HOM05D003807 ORTHO05D002847 1.1e-39 167.5 202 58.9
Sopen02g017610 Solanum pennellii HOM05D003807 ORTHO05D002847 6.9e-39 164.9 147 68.0
Peaxi162Scf00876g00004 Petunia axillaris HOM05D003807 ORTHO05D002847 5.4e-36 155.2 138 66.7
Peaxi162Scf01809g00001 Petunia axillaris HOM05D003807 ORTHO05D002847 5.4e-36 155.2 138 66.7
Solyc02g031990.1 Solanum lycopersicum HOM05D003807 ORTHO05D002847 1.2e-35 154.1 210 52.4
PGSC0003DMG400014938 Solanum tuberosum HOM05D003807 ORTHO05D002847 5.6e-33 145.2 218 50.9
Sopen02g010250 Solanum pennellii HOM05D003807 ORTHO05D002847 2.8e-24 116.3 161 49.7
DCAR_001286 Daucus carota HOM05D003807 ORTHO05D002847 4.5e-22 109.0 168 44.6
Prupe.4G116000 Prunus persica HOM05D003807 ORTHO05D002847 3.5e-19 99.4 171 46.8
Duzib248G0332 Durio zibethinus HOM05D003807 ORTHO05D002847 1.0e-18 97.8 183 38.3
CiPaw.09G073700 Carya illinoinensis HOM05D003807 ORTHO05D002847 8.7e-18 94.7 187 36.4
QL11p012767 Quercus lobata HOM05D003807 ORTHO05D002847 2.5e-17 93.2 131 45.8
Duzib132G0260 Durio zibethinus HOM05D003807 ORTHO05D002847 2.1e-16 90.1 137 44.5
Actinidia22425 Actinidia chinensis HOM05D003807 ORTHO05D002847 3.7e-16 89.4 155 43.2
DCAR_024218 Daucus carota HOM05D003807 ORTHO05D002847 1.4e-15 87.4 79 59.5
Sabra01G0133000 Salix brachista HOM05D003807 ORTHO05D002847 1.8e-15 87.0 132 43.9
TWI63G0470 Tripterygium wilfordii HOM05D003807 ORTHO05D002847 1.8e-15 87.0 143 42.7
Thecc.02G005500 Theobroma cacao HOM05D003807 ORTHO05D002847 4.0e-15 85.9 198 34.8
Manes.03G074500 Manihot esculenta HOM05D003807 ORTHO05D002847 6.9e-15 85.1 140 42.1
RcHm_v2.0_Chr5g0020711 Rosa chinensis HOM05D003807 ORTHO05D002847 1.2e-14 84.3 104 55.8
Cfa000664 Carpinus fangiana HOM05D003807 ORTHO05D002847 1.5e-14 84.0 147 40.1
Haze_06156 Corylus avellana HOM05D003807 ORTHO05D002847 2.0e-14 83.6 75 56.0
Haze_06157 Corylus avellana HOM05D003807 ORTHO05D002847 2.0e-14 83.6 82 54.9
DCAR_004339 Daucus carota HOM05D003807 ORTHO05D002847 2.6e-14 83.2 152 39.5
Glyma.15G158200 Glycine max HOM05D003807 ORTHO05D002847 4.5e-14 82.4 138 43.5
Gohir.D12G046900 Gossypium hirsutum HOM05D003807 ORTHO05D002847 4.5e-14 82.4 151 39.7
Potri.003G075800 Populus trichocarpa HOM05D003807 ORTHO05D002847 5.8e-14 82.0 219 33.8
Oeu052639.1 Olea europaea HOM05D003807 ORTHO05D002847 7.6e-14 81.6 113 48.7
Gorai.008G049400 Gossypium raimondii HOM05D003807 ORTHO05D002847 1.0e-13 81.3 151 39.7
TWI38G0220 Tripterygium wilfordii HOM05D003807 ORTHO05D002847 1.3e-13 80.9 105 50.5
FvH4_3g12720 Fragaria vesca HOM05D003807 ORTHO05D002847 2.2e-13 80.1 127 44.1
FAN11G1675 Fragaria x ananassa HOM05D003807 ORTHO05D002847 2.2e-13 80.1 127 44.1
PGSC0003DMG400009442 Solanum tuberosum HOM05D003807 ORTHO05D002847 2.2e-13 80.1 156 41.0
Medtr2g035850 Medicago truncatula HOM05D003807 ORTHO05D002847 2.9e-13 79.7 154 43.5
TPR.G31858 Trifolium pratense HOM05D003807 ORTHO05D002847 5.0e-13 79.0 220 37.3
Atru.chr10.409 Acer truncatum HOM05D003807 ORTHO05D002847 6.5e-13 78.6 79 55.7
Psat1g149760 Pisum sativum HOM05D003807 ORTHO05D002847 6.5e-13 78.6 176 39.8
CAN.G1299.6 Capsicum annuum HOM05D003807 ORTHO05D002847 8.4e-13 78.2 143 43.4
Gohir.A12G048100 Gossypium hirsutum HOM05D003807 ORTHO05D002847 8.4e-13 78.2 142 39.4
Oeu041444.1 Olea europaea HOM05D003807 ORTHO05D002847 8.4e-13 78.2 137 42.3
Potri.001G158800 Populus trichocarpa HOM05D003807 ORTHO05D002847 8.4e-13 78.2 131 41.2
Solyc02g068460.1 Solanum lycopersicum HOM05D003807 ORTHO05D002847 8.4e-13 78.2 152 41.4
Sopen02g017600 Solanum pennellii HOM05D003807 ORTHO05D002847 1.4e-12 77.4 159 40.3
Ca_01992_v3 Cicer arietinum L. HOM05D003807 ORTHO05D002847 3.2e-12 76.3 150 38.0
Ciclev10016595m.g Citrus clementina HOM05D003807 ORTHO05D002847 3.2e-12 76.3 170 34.7
FAN16G0324 Fragaria x ananassa HOM05D003807 ORTHO05D002847 3.2e-12 76.3 139 40.3
Nitab4.5_0000443g0140 Nicotiana tabacum HOM05D003807 ORTHO05D002847 3.2e-12 76.3 95 51.6
Glyma.09G051900 Glycine max HOM05D003807 ORTHO05D002847 4.2e-12 75.9 132 40.9
Duzib132G1175 Durio zibethinus HOM05D003807 ORTHO05D002847 7.1e-12 75.1 208 33.7
Sabra03G0046300 Salix brachista HOM05D003807 ORTHO05D002847 7.1e-12 75.1 183 35.0
VMungo1309G0233 Vigna mungo HOM05D003807 ORTHO05D002847 9.3e-12 74.7 108 44.4
FAN25G3700 Fragaria x ananassa HOM05D003807 ORTHO05D002847 1.2e-11 74.3 175 37.7
Gohir.A12G048200 Gossypium hirsutum HOM05D003807 ORTHO05D002847 1.2e-11 74.3 143 37.8
Oeu046931.1 Olea europaea HOM05D003807 ORTHO05D002847 1.2e-11 74.3 168 35.7
Gorai.008G049600 Gossypium raimondii HOM05D003807 ORTHO05D002847 1.6e-11 73.9 143 37.8
Hma1.2p1_0088F.1_g045023 Hydrangea macrophylla HOM05D003807 ORTHO05D002847 1.6e-11 73.9 101 46.5
Hma1.2p1_0088F.1_g045030 Hydrangea macrophylla HOM05D003807 ORTHO05D002847 1.6e-11 73.9 101 46.5
Peaxi162Scf00199g00915 Petunia axillaris HOM05D003807 ORTHO05D002847 2.1e-11 73.6 150 37.3
COL.COLO4_17627 Corchorus olitorius HOM05D003807 ORTHO05D002847 2.7e-11 73.2 128 43.0
SalBow8G4256 Salvia bowleyana HOM05D003807 ORTHO05D002847 2.7e-11 73.2 59 59.3
Dinv31174 Davidia involucrata HOM05D003807 ORTHO05D002847 3.5e-11 72.8 83 50.6
FAN21G0474 Fragaria x ananassa HOM05D003807 ORTHO05D002847 3.5e-11 72.8 109 43.1
Nitab4.5_0008708g0020 Nicotiana tabacum HOM05D003807 ORTHO05D002847 3.5e-11 72.8 147 38.8
SGA_v2.0_scaffold175G39345 Striga asiatica HOM05D003807 ORTHO05D002847 3.5e-11 72.8 133 39.1
Phvul.009G241900 Phaseolus vulgaris HOM05D003807 ORTHO05D002847 4.6e-11 72.4 137 38.7
Thecc.02G005300 Theobroma cacao HOM05D003807 ORTHO05D002847 4.6e-11 72.4 200 35.5
CANSAT35G1226 Cannabis sativa HOM05D003807 ORTHO05D002847 7.9e-11 71.6 122 41.8
Eucgr.D00026 Eucalyptus grandis HOM05D003807 ORTHO05D002847 1.0e-10 71.2 176 35.2
Gohir.D12G047000 Gossypium hirsutum HOM05D003807 ORTHO05D002847 1.3e-10 70.9 143 37.1
Phvul.002G189900 Phaseolus vulgaris HOM05D003807 ORTHO05D002847 2.3e-10 70.1 124 41.1
Lj1P1147T18 Lonicera japonica HOM05D003807 ORTHO05D002847 3.0e-10 69.7 119 37.8
TPR.G31240 Trifolium pratense HOM05D003807 ORTHO05D002847 3.0e-10 69.7 139 38.1
Hma1.2p1_0088F.1_g045026 Hydrangea macrophylla HOM05D003807 ORTHO05D002847 3.9e-10 69.3 83 50.6
Hma1.2p1_0088F.1_g045040 Hydrangea macrophylla HOM05D003807 ORTHO05D002847 3.9e-10 69.3 83 50.6
TAR626G1107 Trochodendron aralioides HOM05D001711 ORTHO05D002847 3.9e-10 69.3 102 46.1
Potri.006G006300 Populus trichocarpa HOM05D001711 ORTHO05D002847 5.1e-10 68.9 118 39.8
Lalb_Chr15g0083801 Lupinus albus HOM05D003807 ORTHO05D002847 8.7e-10 68.2 74 52.7
Medtr4g094698 Medicago truncatula HOM05D003807 ORTHO05D002847 8.7e-10 68.2 86 50.0
Sopen07g022830 Solanum pennellii HOM05D003807 ORTHO05D002847 8.7e-10 68.2 143 37.1
Lalb_Chr18g0052151 Lupinus albus HOM05D003807 ORTHO05D002847 1.5e-09 67.4 149 38.3
PGR004G1269 Punica granatum HOM05D003807 ORTHO05D002847 1.5e-09 67.4 53 64.2
CiPaw.03G111200 Carya illinoinensis HOM05D001711 ORTHO05D002847 2.5e-09 66.6 110 45.5
CiPaw.10G062400 Carya illinoinensis HOM05D003807 ORTHO05D002847 2.5e-09 66.6 92 45.7
Oeu003076.1 Olea europaea HOM05D001711 ORTHO05D002847 3.3e-09 66.2 112 37.5
RcHm_v2.0_Chr2g0153531 Rosa chinensis HOM05D003807 ORTHO05D002847 3.3e-09 66.2 67 53.7
Thecc.01G173400 Theobroma cacao HOM05D001711 ORTHO05D002847 4.3e-09 65.9 102 48.0
TAR627G0259 Trochodendron aralioides HOM05D003807 ORTHO05D002847 4.3e-09 65.9 184 32.1
Duzib248G1013 Durio zibethinus HOM05D003807 ORTHO05D002847 5.7e-09 65.5 116 40.5
Migut.M02002 Erythranthe guttata HOM05D003807 ORTHO05D002847 5.7e-09 65.5 88 48.9
Glyma.05G133000 Glycine max HOM05D003807 ORTHO05D002847 7.4e-09 65.1 111 42.3
Cpa.g.sc8.284 Carica papaya HOM05D001711 ORTHO05D002847 9.7e-09 64.7 119 37.8
Phvul.008G290700 Phaseolus vulgaris HOM05D003807 ORTHO05D002847 1.3e-08 64.3 134 37.3
VMungo0540G2275 Vigna mungo HOM05D001711 ORTHO05D002847 1.3e-08 64.3 105 43.8
Cpa.g.sc30.129 Carica papaya HOM05D003807 ORTHO05D002847 1.6e-08 63.9 66 53.0
Gohir.D11G162700 Gossypium hirsutum HOM05D001711 ORTHO05D002847 1.6e-08 63.9 82 50.0
Gorai.007G173300 Gossypium raimondii HOM05D001711 ORTHO05D002847 1.6e-08 63.9 82 50.0
CiPaw.10G062300 Carya illinoinensis HOM05D003807 ORTHO05D002847 2.2e-08 63.5 142 38.0
Cfa022497 Carpinus fangiana HOM05D001711 ORTHO05D002847 2.8e-08 63.2 86 47.7
Sed0022416 Sechium edule HOM05D003807 ORTHO05D002847 2.8e-08 63.2 58 53.4
MELO3C016231.2 Cucumis melo HOM05D001711 ORTHO05D002847 3.7e-08 62.8 62 54.8
CsaV3_4G007280 Cucumis sativus L. HOM05D001711 ORTHO05D002847 3.7e-08 62.8 62 54.8
FvH4_6g39500 Fragaria vesca HOM05D003807 ORTHO05D002847 3.7e-08 62.8 67 47.8
FAN02G4313 Fragaria x ananassa HOM05D003807 ORTHO05D002847 3.7e-08 62.8 67 47.8
FAN05G3549 Fragaria x ananassa HOM05D003807 ORTHO05D002847 3.7e-08 62.8 67 47.8
FAN09G4092 Fragaria x ananassa HOM05D003807 ORTHO05D002847 3.7e-08 62.8 67 47.8
FAN14G1837 Fragaria x ananassa HOM05D003807 ORTHO05D002847 3.7e-08 62.8 67 47.8
QL11p039996 Quercus lobata HOM05D001711 ORTHO05D002847 3.7e-08 62.8 82 48.8
CiPaw.04G072500 Carya illinoinensis HOM05D001711 ORTHO05D002847 4.8e-08 62.4 86 46.5
VMungo0251G2884 Vigna mungo HOM05D003807 ORTHO05D002847 4.8e-08 62.4 64 51.6
Gohir.A11G155800 Gossypium hirsutum HOM05D001711 ORTHO05D002847 6.3e-08 62.0 82 48.8
Potri.016G017900 Populus trichocarpa HOM05D001711 ORTHO05D002847 6.3e-08 62.0 103 41.7
PGSC0003DMG400011745 Solanum tuberosum HOM05D003807 ORTHO05D002847 6.3e-08 62.0 114 39.5
Aa31LG9G2270 Aethionema arabicum HOM05D003807 ORTHO05D002847 1.1e-07 61.2 141 39.0
Nitab4.5_0002232g0070 Nicotiana tabacum HOM05D003807 ORTHO05D002847 1.4e-07 60.8 59 57.6
Sed0023526 Sechium edule HOM05D003807 ORTHO05D002847 1.4e-07 60.8 66 54.5
Solyc07g043250.1 Solanum lycopersicum HOM05D003807 ORTHO05D002847 1.4e-07 60.8 112 40.2
VMungo0647G1411 Vigna mungo HOM05D001711 ORTHO05D002847 1.4e-07 60.8 120 35.8
Manes.09G079619 Manihot esculenta HOM05D001711 ORTHO05D002847 1.8e-07 60.5 179 35.2
Nn7g38292 Nelumbo nucifera HOM05D001711 ORTHO05D002847 1.8e-07 60.5 62 51.6
Oeu052638.1 Olea europaea HOM05D003807 ORTHO05D002847 1.8e-07 60.5 145 33.8
Sc05g0004730 Simmondsia chinensis HOM05D003807 ORTHO05D002847 1.8e-07 60.5 102 38.2
TPR.G8276 Trifolium pratense HOM05D001711 ORTHO05D002847 1.8e-07 60.5 79 50.6
Duzib133G1073 Durio zibethinus HOM05D001711 ORTHO05D002847 2.4e-07 60.1 99 42.4
Glyma.14G002800 Glycine max HOM05D001711 ORTHO05D002847 2.4e-07 60.1 90 42.2
Lsat_1_v5_gn_6_111360 Lactuca sativa HOM05D055215 ORTHO05D002847 2.4e-07 60.1 119 33.6
Nitab4.5_0000170g0400 Nicotiana tabacum HOM05D003807 ORTHO05D002847 2.4e-07 60.1 108 40.7
Peaxi162Scf00393g00062 Petunia axillaris HOM05D001711 ORTHO05D002847 2.4e-07 60.1 58 53.4
TWI60G0522 Tripterygium wilfordii HOM05D001711 ORTHO05D002847 2.4e-07 60.1 68 51.5
Manes.08G068801 Manihot esculenta HOM05D001711 ORTHO05D002847 3.1e-07 59.7 179 32.4
SalBow3G3892 Salvia bowleyana HOM05D003807 ORTHO05D002847 3.1e-07 59.7 140 35.0
arahy.Tifrunner.gnm1.ann1.H0VTBF Arachis hypogaea HOM05D003807 ORTHO05D002847 4.1e-07 59.3 140 32.1
Cpa.g.sc30.131 Carica papaya HOM05D003807 ORTHO05D002847 4.1e-07 59.3 71 52.1
Dinv08378 Davidia involucrata HOM05D001711 ORTHO05D002847 4.1e-07 59.3 76 46.1
Glyma.08G087400 Glycine max HOM05D003807 ORTHO05D002847 4.1e-07 59.3 154 37.0
Oeu008729.1 Olea europaea HOM05D003807 ORTHO05D002847 4.1e-07 59.3 139 36.0
Sabra06G0005100 Salix brachista HOM05D001711 ORTHO05D002847 4.1e-07 59.3 88 43.2
ClCG01G025570 Citrullus lanatus HOM05D003807 ORTHO05D002847 5.3e-07 58.9 71 47.9
MELO3C007028.2 Cucumis melo HOM05D003807 ORTHO05D002847 5.3e-07 58.9 70 51.4
Gohir.A07G083901 Gossypium hirsutum HOM05D003807 ORTHO05D002847 5.3e-07 58.9 71 47.9
Eucgr.K01342 Eucalyptus grandis HOM05D001711 ORTHO05D002847 6.9e-07 58.5 61 57.4
Glyma.13G005100 Glycine max HOM05D001711 ORTHO05D002847 6.9e-07 58.5 81 44.4
LjContig00081g0007494 Lotus japonicus HOM05D001711 ORTHO05D002847 6.9e-07 58.5 43 67.4
arahy.Tifrunner.gnm1.ann1.W19YV6 Arachis hypogaea HOM05D001711 ORTHO05D002847 9.0e-07 58.2 42 66.7
ClCG07G010990 Citrullus lanatus HOM05D001711 ORTHO05D002847 9.0e-07 58.2 100 43.0
COL.COLO4_17629 Corchorus olitorius HOM05D003807 ORTHO05D002847 9.0e-07 58.2 142 35.2
Migut.M00092 Erythranthe guttata HOM05D001711 ORTHO05D002847 9.0e-07 58.2 46 65.2
Medtr3g081500 Medicago truncatula HOM05D001711 ORTHO05D002847 9.0e-07 58.2 89 47.2
Glyma.20G064500 Glycine max HOM05D001711 ORTHO05D002847 1.2e-06 57.8 81 45.7
Sp3g19970 Schrenkiella parvula HOM05D003807 ORTHO05D002847 1.2e-06 57.8 128 35.2
Carub.0003s2233 Capsella rubella HOM05D003807 ORTHO05D002847 1.5e-06 57.4 63 54.0
Haze_13646 Corylus avellana HOM05D001711 ORTHO05D002847 1.5e-06 57.4 84 41.7
Duzib211G0113 Durio zibethinus HOM05D001711 ORTHO05D002847 1.5e-06 57.4 102 38.2
CAN.G182.24 Capsicum annuum HOM05D001711 ORTHO05D002847 2.0e-06 57.0 85 43.5
Ca_16315_v3 Cicer arietinum L. HOM05D001711 ORTHO05D002847 2.6e-06 56.6 96 43.8
QL11p040755 Quercus lobata HOM05D001711 ORTHO05D002847 2.6e-06 56.6 82 46.3
Atru.chr8.1002 Acer truncatum HOM05D003807 ORTHO05D002847 3.4e-06 56.2 87 43.7
CARHR098040 Cardamine hirsuta HOM05D003807 ORTHO05D002847 3.4e-06 56.2 43 67.4
DCAR_013031 Daucus carota HOM05D001711 ORTHO05D002847 3.4e-06 56.2 42 64.3
Sabra16G0020100 Salix brachista HOM05D001711 ORTHO05D002847 3.4e-06 56.2 105 41.0
BcaB06g26318 Brassica carinata HOM05D003807 ORTHO05D002847 4.5e-06 55.8 63 52.4
Gohir.D07G087400 Gossypium hirsutum HOM05D003807 ORTHO05D002847 4.5e-06 55.8 74 47.3
Gorai.001G093400 Gossypium raimondii HOM05D003807 ORTHO05D002847 4.5e-06 55.8 74 47.3
Lalb_Chr04g0247001 Lupinus albus HOM05D003807 ORTHO05D002847 4.5e-06 55.8 43 62.8
Rhsim12G0015000 Rhododendron simsii HOM05D001711 ORTHO05D002847 4.5e-06 55.8 115 39.1
CANSAT64G0062 Cannabis sativa HOM05D001711 ORTHO05D002847 5.9e-06 55.5 45 62.2
Lalb_Chr12g0208981 Lupinus albus HOM05D003807 ORTHO05D002847 5.9e-06 55.5 106 46.2
Peaxi162Scf00047g00243 Petunia axillaris HOM05D003807 ORTHO05D002847 5.9e-06 55.5 69 43.5
TWI32G0059 Tripterygium wilfordii HOM05D003807 ORTHO05D002847 7.7e-06 55.1 67 50.7
MSTRG.12273 Avicennia marina HOM05D003807 ORTHO05D002847 1.0e-05 54.7 69 50.7
A01p22390 Brassica napus HOM05D003807 ORTHO05D002847 1.0e-05 54.7 154 31.8
ECA246G2171 Erigeron canadensis HOM05D003807 ORTHO05D002847 1.0e-05 54.7 116 36.2
Prupe.3G185800 Prunus persica HOM05D003807 ORTHO05D002847 1.0e-05 54.7 103 38.8
Sed0015396 Sechium edule HOM05D001711 ORTHO05D002847 1.0e-05 54.7 103 41.7


User provided reference genes

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