Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000443g0010 Nicotiana tabacum HOM05D005911 ORTHO05D007565 0.0e+00 1160.6 606 100.0
Peaxi162Scf00016g00941 Petunia axillaris HOM05D005911 ORTHO05D007565 1.6e-125 454.1 389 65.3
CAN.G322.116 Capsicum annuum HOM05D005911 ORTHO05D007565 3.1e-124 449.9 392 63.0
Nitab4.5_0001794g0010 Nicotiana tabacum HOM05D005911 ORTHO05D007565 3.1e-124 449.9 385 65.7
Nitab4.5_0008989g0030 Nicotiana tabacum HOM05D005911 ORTHO05D007565 3.4e-123 446.4 385 65.7
PGSC0003DMG400025190 Solanum tuberosum HOM05D005911 ORTHO05D007565 2.2e-122 443.7 386 63.2
Solyc01g109450.3 Solanum lycopersicum HOM05D005911 ORTHO05D007565 1.1e-121 441.4 386 63.0
Sopen01g051640 Solanum pennellii HOM05D005911 ORTHO05D007565 1.9e-121 440.7 386 63.2
CAN.G149.23 Capsicum annuum HOM05D005911 ORTHO05D007565 5.5e-121 439.1 508 53.3
Dinv42087 Davidia involucrata HOM05D005911 ORTHO05D007565 3.5e-112 409.8 388 59.0
MSTRG.20102 Avicennia marina HOM05D005911 ORTHO05D007565 1.3e-111 407.9 388 58.8
Cc02_g17800 Coffea canephora HOM05D005911 ORTHO05D007565 8.7e-111 405.2 406 58.1
CSS0013374 Camellia sinensis var. sinensis HOM05D005911 ORTHO05D007565 1.5e-110 404.4 384 58.9
Atru.chr5.2957 Acer truncatum HOM05D005911 ORTHO05D007565 2.5e-110 403.7 389 57.6
DCAR_003638 Daucus carota HOM05D005911 ORTHO05D007565 1.3e-109 401.4 388 56.4
Oeu014335.1 Olea europaea HOM05D005911 ORTHO05D007565 1.4e-108 397.9 379 58.8
Actinidia17824 Actinidia chinensis HOM05D005911 ORTHO05D007565 7.7e-107 392.1 384 57.8
Potri.004G152100 Populus trichocarpa HOM05D005911 ORTHO05D007565 1.0e-106 391.7 387 56.6
TAR628G1003 Trochodendron aralioides HOM05D005911 ORTHO05D007565 1.0e-106 391.7 411 55.7
GSVIVG01024153001 Vitis vinifera HOM05D005911 ORTHO05D007565 1.0e-106 391.7 395 55.7
Prupe.8G101700 Prunus persica HOM05D005911 ORTHO05D007565 1.3e-106 391.3 392 57.4
MD10G1080400 Malus domestica HOM05D005911 ORTHO05D007565 5.0e-106 389.4 385 57.4
Migut.N01227 Erythranthe guttata HOM05D005911 ORTHO05D007565 1.6e-104 384.4 389 57.3
FAN24G3462 Fragaria x ananassa HOM05D005911 ORTHO05D007565 1.6e-104 384.4 389 56.3
FvH4_2g08380 Fragaria vesca HOM05D005911 ORTHO05D007565 4.6e-104 382.9 389 56.0
RcHm_v2.0_Chr6g0263461 Rosa chinensis HOM05D005911 ORTHO05D007565 5.1e-103 379.4 388 55.2
Gohir.D04G144200 Gossypium hirsutum HOM05D005911 ORTHO05D007565 1.1e-102 378.3 392 53.3
Cfa005027 Carpinus fangiana HOM05D005911 ORTHO05D007565 2.5e-102 377.1 385 56.6
Gorai.012G129800 Gossypium raimondii HOM05D005911 ORTHO05D007565 3.3e-102 376.7 392 53.1
Rhsim05G0076000 Rhododendron simsii HOM05D005911 ORTHO05D007565 4.3e-102 376.3 383 55.6
CiPaw.06G137300 Carya illinoinensis HOM05D005911 ORTHO05D007565 5.7e-102 375.9 385 55.1
FAN20G0571 Fragaria x ananassa HOM05D005911 ORTHO05D007565 2.2e-101 374.0 376 56.4
QL11p042848 Quercus lobata HOM05D005911 ORTHO05D007565 2.2e-101 374.0 385 56.6
CsaV3_7G023300 Cucumis sativus L. HOM05D005911 ORTHO05D007565 6.3e-101 372.5 384 54.4
ECA236G0345 Erigeron canadensis HOM05D005911 ORTHO05D007565 8.2e-101 372.1 388 54.1
Nn1g05068 Nelumbo nucifera HOM05D005911 ORTHO05D007565 8.2e-101 372.1 391 52.4
TWI31G0066 Tripterygium wilfordii HOM05D005911 ORTHO05D007565 8.2e-101 372.1 397 53.1
SGA_v2.0_scaffold44G16630 Striga asiatica HOM05D005911 ORTHO05D007565 1.4e-100 371.3 373 57.1
Duzib248G0238 Durio zibethinus HOM05D005911 ORTHO05D007565 2.4e-100 370.5 396 54.3
Sed0023974 Sechium edule HOM05D005911 ORTHO05D007565 5.3e-100 369.4 421 51.8
Lalb_Chr16g0385211 Lupinus albus HOM05D005911 ORTHO05D007565 1.2e-99 368.2 385 53.8
ClCG02G005220 Citrullus lanatus HOM05D005911 ORTHO05D007565 4.5e-99 366.3 380 53.7
Aqoxy5G01675 Aquilegia oxysepala HOM05D005911 ORTHO05D007565 7.7e-99 365.5 385 53.8
Ca_18760_v3 Cicer arietinum L. HOM05D005911 ORTHO05D007565 7.7e-99 365.5 388 52.1
Cpa.g.sc62.118 Carica papaya HOM05D005911 ORTHO05D007565 1.3e-98 364.8 384 53.9
FAN15G1485 Fragaria x ananassa HOM05D005911 ORTHO05D007565 2.2e-98 364.0 360 55.8
TPR.G20990 Trifolium pratense HOM05D005911 ORTHO05D007565 2.2e-98 364.0 387 54.0
Manes.17G099400 Manihot esculenta HOM05D005911 ORTHO05D007565 2.9e-98 363.6 415 51.6
Sabra04G0100900 Salix brachista HOM05D005911 ORTHO05D007565 2.9e-98 363.6 426 50.9
Phvul.007G233200 Phaseolus vulgaris HOM05D005911 ORTHO05D007565 5.0e-98 362.8 383 53.5
Thecc.02G123100 Theobroma cacao HOM05D005911 ORTHO05D007565 1.4e-97 361.3 385 53.0
Lj4g0018405 Lotus japonicus HOM05D005911 ORTHO05D007565 3.2e-97 360.1 386 53.4
SalBow3G0191 Salvia bowleyana HOM05D005911 ORTHO05D007565 4.2e-97 359.8 389 52.4
Medtr4g084100 Medicago truncatula HOM05D005911 ORTHO05D007565 1.2e-96 358.2 383 53.3
Glyma.20G019800 Glycine max HOM05D005911 ORTHO05D007565 1.6e-96 357.8 370 54.6
AUR62011353 Chenopodium quinoa HOM05D005911 ORTHO05D007565 7.9e-96 355.5 387 50.1
HanXRQChr16g0504971 Helianthus annuus HOM05D005911 ORTHO05D007565 3.9e-95 353.2 379 52.5
MBI16_g17455_MAGBIO Magnolia biondii HOM05D005911 ORTHO05D007565 2.0e-94 350.9 392 49.2
AUR62016709 Chenopodium quinoa HOM05D005911 ORTHO05D007565 3.3e-94 350.1 387 50.1
VMungo0720G1659 Vigna mungo HOM05D005911 ORTHO05D007565 3.3e-94 350.1 414 50.0
COL.COLO4_32449 Corchorus olitorius HOM05D005911 ORTHO05D007565 9.7e-94 348.6 369 54.5
Psat3g133040 Pisum sativum HOM05D005911 ORTHO05D007565 1.7e-93 347.8 343 56.3
arahy.Tifrunner.gnm1.ann1.CA4G6V Arachis hypogaea HOM05D005911 ORTHO05D007565 4.8e-93 346.3 388 51.5
EL10Ac9g21750 Beta vulgaris HOM05D005911 ORTHO05D007565 4.8e-93 346.3 394 48.7
vmacro19435 Vaccinium macrocarpon HOM05D005911 ORTHO05D007565 9.1e-92 342.0 374 51.3
Hma1.2p1_0066F.1_g036670 Hydrangea macrophylla HOM05D005911 ORTHO05D007565 2.0e-91 340.9 315 58.4
MELO3C012560.2 Cucumis melo HOM05D005911 ORTHO05D007565 5.9e-91 339.3 404 50.2
Hund00288 Selenicereus undatus HOM05D005911 ORTHO05D007565 8.5e-90 335.5 386 48.4
Carub.0001s3853 Capsella rubella HOM05D005911 ORTHO05D007565 5.5e-89 332.8 380 49.2
THA.LOC104804910 Tarenaya hassleriana HOM05D005911 ORTHO05D007565 1.6e-88 331.3 387 50.6
Sp1g36210 Schrenkiella parvula HOM05D005911 ORTHO05D007565 2.3e-87 327.4 380 48.9
Lsat_1_v5_gn_7_89660 Lactuca sativa HOM05D005911 ORTHO05D007565 5.2e-87 326.2 387 50.6
BcaB02g11057 Brassica carinata HOM05D005911 ORTHO05D007565 3.3e-86 323.6 381 48.6
AT1G49350 Arabidopsis thaliana HOM05D005911 ORTHO05D007565 4.4e-86 323.2 382 49.5
AL1G56310 Arabidopsis lyrata HOM05D005911 ORTHO05D007565 1.3e-85 321.6 382 49.0
PGR042G3082 Punica granatum HOM05D005911 ORTHO05D009502 2.2e-85 320.9 416 44.7
Thhalv10011559m.g Eutrema salsugineum HOM05D005911 ORTHO05D007565 3.7e-85 320.1 382 47.6
Gohir.A04G104400 Gossypium hirsutum HOM05D005911 ORTHO05D007565 1.4e-84 318.2 392 48.0
Aa31LG10G4600 Aethionema arabicum HOM05D005713 ORTHO05D007751 2.4e-84 317.4 383 47.5
Eucgr.G01900 Eucalyptus grandis HOM05D005911 ORTHO05D007565 7.0e-84 315.8 335 51.9
A05p20650 Brassica napus HOM05D005911 ORTHO05D007565 1.6e-83 314.7 382 48.2
Sc14g0001790 Simmondsia chinensis HOM05D005911 ORTHO05D007565 1.6e-83 314.7 366 49.5
ATR0733G150 Amborella trichopoda HOM05D005911 ORTHO05D007565 2.7e-83 313.9 422 45.3
BraA05t20973Z Brassica rapa HOM05D005911 ORTHO05D007565 3.5e-83 313.5 382 47.4
BcaC05g27521 Brassica carinata HOM05D005911 ORTHO05D007565 4.5e-83 313.2 382 47.9
C05p34650 Brassica napus HOM05D005911 ORTHO05D007565 1.3e-82 311.6 382 47.9
BolC5t32220H Brassica oleracea HOM05D005911 ORTHO05D007565 1.3e-82 311.6 382 47.9
Eucgr.G00462 Eucalyptus grandis HOM05D005911 ORTHO05D007565 6.5e-82 309.3 335 50.7
Ciclev10029888m.g Citrus clementina HOM05D005911 ORTHO05D007565 2.5e-81 307.4 324 53.7
Haze_02358 Corylus avellana HOM05D005911 ORTHO05D009502 2.5e-81 307.4 414 47.8
BcaC05g27500 Brassica carinata HOM05D005911 ORTHO05D007565 1.6e-80 304.7 382 47.1
Lj9A367G52 Lonicera japonica HOM05D005911 ORTHO05D007565 4.7e-80 303.1 286 58.0
Os05g0185700 Oryza sativa ssp. japonica HOM05D005911 ORTHO05D007565 4.4e-78 296.6 378 45.0
Potri.004G151600 Populus trichocarpa HOM05D005911 ORTHO05D007565 1.3e-77 295.0 299 54.8
SEGI_31956 Sequoiadendron giganteum HOM05D005911 ORTHO05D007565 1.8e-76 291.2 402 43.0
BolC5t32198H Brassica oleracea HOM05D005911 ORTHO05D007565 7.7e-75 285.8 404 44.3
C05p34970 Brassica napus HOM05D005911 ORTHO05D007565 1.3e-69 268.5 325 48.6
unitig_22.g6840 Utricularia gibba HOM05D005911 ORTHO05D007565 7.3e-65 252.7 378 41.0
AL1G56510 Arabidopsis lyrata HOM05D003089 ORTHO05D003544 1.4e-63 248.4 347 44.7
Sc14g0001910 Simmondsia chinensis HOM05D005911 ORTHO05D007565 2.3e-63 247.7 306 49.0
Zm00001eb346550 Zea mays HOM05D005911 ORTHO05D007565 5.7e-62 243.0 317 43.8
FAN27G2671 Fragaria x ananassa HOM05D005911 ORTHO05D007565 1.3e-61 241.9 217 58.5
AagrBONN_evm.TU.Sc2ySwM_117.291 Anthoceros agrestis HOM05D005911 ORTHO05D007565 1.7e-61 241.5 358 42.7
Pp3c15_14160 Physcomitrium patens HOM05D005911 ORTHO05D007565 3.9e-58 230.3 370 39.7
CDE02G3889 Ceratophyllum demersum HOM05D005911 ORTHO05D007565 1.4e-55 221.9 368 38.6
CBR_g27891 Chara braunii HOM05D005911 ORTHO05D007565 7.8e-51 206.1 403 36.2
SGA_v2.0_scaffold55G19804 Striga asiatica HOM05D005911 ORTHO05D007565 1.9e-49 201.4 267 48.3
Mapoly0044s0080 Marchantia polymorpha HOM05D005911 ORTHO05D007565 4.1e-44 183.7 322 37.6
CARHR039360 Cardamine hirsuta HOM05D005911 ORTHO05D007565 3.0e-42 177.6 269 39.4
Ah.01g006180 Amaranthus hybridus HOM05D002934 ORTHO05D003937 2.1e-35 154.8 213 45.5
MCO11G507 Micromonas commoda HOM05D005911 ORTHO05D007565 2.0e-30 138.3 417 30.0
Eucgr.G01892 Eucalyptus grandis HOM05D005911 ORTHO05D007565 2.9e-29 134.4 176 44.3
Gorai.008G153200 Gossypium raimondii HOM05D005911 ORTHO05D007565 4.9e-29 133.7 146 44.5
CARHR039340 Cardamine hirsuta HOM05D005911 ORTHO05D007565 1.6e-27 128.6 186 44.1
Eucgr.G00468 Eucalyptus grandis HOM05D005911 ORTHO05D007565 7.8e-27 126.3 228 36.0
Nitab4.5_0000776g0050 Nicotiana tabacum HOM05D005911 ORTHO05D007565 7.8e-27 126.3 118 58.5
A05p20720 Brassica napus HOM05D005911 ORTHO05D007565 6.6e-26 123.2 162 48.1
BraA05t20979Z Brassica rapa HOM05D005911 ORTHO05D007565 6.6e-26 123.2 162 48.1
AagrBONN_evm.TU.Sc2ySwM_228.5516 Anthoceros agrestis HOM05D005911 ORTHO05D007565 6.2e-24 116.7 120 49.2
PRCOL_00000481 Prasinoderma coloniale HOM05D005911 ORTHO05D007565 1.3e-21 109.0 344 27.9
Cre17.g701100 Chlamydomonas reinhardtii HOM05D005911 ORTHO05D007565 2.2e-21 108.2 206 34.5
TAR371G0586 Trochodendron aralioides HOM05D005911 ORTHO05D007565 1.6e-19 102.1 167 46.7
TAR371G0927 Trochodendron aralioides HOM05D005911 ORTHO05D007565 2.8e-16 91.3 111 51.4
Ciclev10013569m.g Citrus clementina HOM05D005911 ORTHO05D007565 2.4e-15 88.2 78 59.0
arahy.Tifrunner.gnm1.ann1.IUSJ9T Arachis hypogaea HOM05D005911 ORTHO05D007565 4.0e-15 87.4 66 66.7
CARHR039370 Cardamine hirsuta HOM05D005911 ORTHO05D007565 2.0e-14 85.1 105 46.7
Lj9A367G53 Lonicera japonica HOM05D005911 ORTHO05D007565 1.4e-12 79.0 79 54.4
Ciclev10003801m.g Citrus clementina HOM05D005911 ORTHO05D007565 1.6e-11 75.5 77 57.1
Ciclev10018182m.g Citrus clementina HOM05D005911 ORTHO05D007565 8.7e-10 69.7 73 56.2
Sc14g0001900 Simmondsia chinensis HOM05D005911 ORTHO05D007565 5.3e-07 60.5 67 49.3
Gohir.D04G144225 Gossypium hirsutum HOM05D005911 ORTHO05D007565 1.2e-06 59.3 70 52.9
Gorai.012G129900 Gossypium raimondii HOM05D005911 ORTHO05D007565 1.2e-06 59.3 70 52.9
QL04p035577 Quercus lobata HOM05D005911 ORTHO05D007565 5.8e-06 57.0 60 55.0
QL04p046160 Quercus lobata HOM05D005911 ORTHO05D338257 7.6e-06 56.6 49 63.3
QL11p051325 Quercus lobata HOM05D005911 ORTHO05D007565 1.0e-05 56.2 46 67.4


User provided reference genes

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