Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000442g0270 Nicotiana tabacum HOM05D000017 ORTHO05D009364 3.0e-36 154.8 89 100.0
Nitab4.5_0000792g0170 Nicotiana tabacum HOM05D000017 ORTHO05D009364 9.1e-25 116.7 62 91.9
Nitab4.5_0001495g0110 Nicotiana tabacum HOM05D000017 ORTHO05D009364 9.1e-25 116.7 83 75.9
Nitab4.5_0001601g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.6e-24 115.9 66 87.9
Nitab4.5_0000936g0100 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.7e-24 115.2 66 87.9
Nitab4.5_0001215g0130 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.7e-24 115.2 83 86.7
Nitab4.5_0001576g0040 Nicotiana tabacum HOM05D000017 ORTHO05D001349 3.5e-24 114.8 65 87.7
Nitab4.5_0000923g0170 Nicotiana tabacum HOM05D000017 ORTHO05D009364 4.5e-24 114.4 66 86.4
Nitab4.5_0000022g0040 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.3e-23 112.8 66 86.4
Nitab4.5_0003857g0070 Nicotiana tabacum HOM05D000017 ORTHO05D009364 1.3e-23 112.8 62 90.3
Nitab4.5_0001219g0040 Nicotiana tabacum HOM05D000017 ORTHO05D009364 3.8e-23 111.3 61 86.9
Nitab4.5_0001117g0050 Nicotiana tabacum HOM05D000017 ORTHO05D001349 8.5e-23 110.2 66 83.3
Nitab4.5_0003858g0110 Nicotiana tabacum HOM05D000017 ORTHO05D009364 1.9e-22 109.0 62 87.1
Nitab4.5_0000426g0250 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.5e-22 108.6 62 85.5
Nitab4.5_0005112g0050 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.5e-22 108.6 60 88.3
Nitab4.5_0001038g0110 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.2e-21 106.3 83 69.9
Nitab4.5_0009942g0040 Nicotiana tabacum HOM05D000017 ORTHO05D009364 1.6e-21 105.9 61 85.2
Nitab4.5_0002052g0150 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.1e-21 105.5 61 85.2
Nitab4.5_0001357g0130 Nicotiana tabacum HOM05D000017 ORTHO05D009364 3.0e-20 101.7 78 71.8
Nitab4.5_0000800g0050 Nicotiana tabacum HOM05D000017 ORTHO05D001349 4.0e-20 101.3 53 90.6
Nitab4.5_0000058g0050 Nicotiana tabacum HOM05D000017 ORTHO05D001349 5.7e-19 97.4 103 64.1
Nitab4.5_0000147g0090 Nicotiana tabacum HOM05D000017 ORTHO05D001349 5.7e-19 97.4 50 92.0
Nitab4.5_0000129g0290 Nicotiana tabacum HOM05D000017 ORTHO05D001349 9.8e-19 96.7 82 65.9
Nitab4.5_0012769g0020 Nicotiana tabacum HOM05D000017 ORTHO05D009364 9.8e-19 96.7 81 65.4
Nitab4.5_0000231g0100 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.7e-18 95.9 57 84.2
Nitab4.5_0001276g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 3.7e-18 94.7 51 88.2
Nitab4.5_0002307g0020 Nicotiana tabacum HOM05D000017 ORTHO05D001349 3.7e-18 94.7 52 88.5
Nitab4.5_0006239g0050 Nicotiana tabacum HOM05D000017 ORTHO05D009364 3.1e-17 91.7 62 77.4
Nitab4.5_0000538g0180 Nicotiana tabacum HOM05D000017 ORTHO05D009364 3.6e-13 78.2 54 74.1
Nitab4.5_0003518g0020 Nicotiana tabacum HOM05D000017 ORTHO05D009364 3.4e-11 71.6 67 56.7
Peaxi162Scf00070g00021 Petunia axillaris HOM05D000017 ORTHO05D001349 4.4e-11 71.2 62 51.6
Peaxi162Scf00099g01612 Petunia axillaris HOM05D000017 ORTHO05D001349 4.4e-11 71.2 62 51.6
Peaxi162Scf00100g00018 Petunia axillaris HOM05D000017 ORTHO05D001349 4.4e-11 71.2 62 51.6
Peaxi162Scf00578g00027 Petunia axillaris HOM05D000017 ORTHO05D001349 4.4e-11 71.2 62 51.6
Peaxi162Scf00594g00014 Petunia axillaris HOM05D000017 ORTHO05D001349 4.4e-11 71.2 62 51.6
Nitab4.5_0000025g0060 Nicotiana tabacum HOM05D000017 ORTHO05D009364 9.8e-11 70.1 59 49.2
Nitab4.5_0001839g0080 Nicotiana tabacum HOM05D000017 ORTHO05D001349 9.8e-11 70.1 67 56.7
Nitab4.5_0001701g0070 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.3e-10 69.7 62 66.1
Nitab4.5_0000353g0040 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.7e-10 69.3 61 57.4
Peaxi162Scf00685g00712 Petunia axillaris HOM05D000017 ORTHO05D009364 2.2e-10 68.9 58 53.4
Peaxi162Scf00802g00027 Petunia axillaris HOM05D000017 ORTHO05D001349 2.2e-10 68.9 49 63.3
Nitab4.5_0000685g0030 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.8e-10 68.6 66 56.1
Nitab4.5_0007976g0030 Nicotiana tabacum HOM05D000017 ORTHO05D001349 4.9e-10 67.8 67 55.2
Nitab4.5_0006809g0020 Nicotiana tabacum HOM05D000017 ORTHO05D001349 6.3e-10 67.4 67 50.7
Sopen03g017650 Solanum pennellii HOM05D000017 ORTHO05D000013 6.3e-10 67.4 53 58.5
Sopen04g018010 Solanum pennellii HOM05D000017 ORTHO05D001349 6.3e-10 67.4 53 58.5
Sopen05g030950 Solanum pennellii HOM05D000017 ORTHO05D000013 6.3e-10 67.4 53 58.5
Sopen12g009320 Solanum pennellii HOM05D000002 ORTHO05D000001 6.3e-10 67.4 53 58.5
Nitab4.5_0000944g0050 Nicotiana tabacum HOM05D000017 ORTHO05D001349 8.3e-10 67.0 57 54.4
Nitab4.5_0000982g0160 Nicotiana tabacum HOM05D000017 ORTHO05D009364 8.3e-10 67.0 58 58.6
Peaxi162Scf00137g00149 Petunia axillaris HOM05D000017 ORTHO05D001349 8.3e-10 67.0 61 45.9
Nitab4.5_0001651g0110 Nicotiana tabacum HOM05D000017 ORTHO05D009364 1.1e-09 66.6 37 86.5
Nitab4.5_0000676g0330 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.4e-09 66.2 38 84.2
Peaxi162Scf00100g00816 Petunia axillaris HOM05D000017 ORTHO05D009364 1.4e-09 66.2 50 52.0
Peaxi162Scf00147g00129 Petunia axillaris HOM05D000017 ORTHO05D001349 1.4e-09 66.2 50 52.0
Peaxi162Scf00209g00944 Petunia axillaris HOM05D000017 ORTHO05D009364 1.4e-09 66.2 50 52.0
Nitab4.5_0009003g0050 Nicotiana tabacum HOM05D000017 ORTHO05D009364 1.8e-09 65.9 57 54.4
Solyc05g047645.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 2.4e-09 65.5 53 56.6
Sopen11g009200 Solanum pennellii HOM05D000004 ORTHO05D000002 2.4e-09 65.5 53 56.6
Peaxi162Scf00043g00613 Petunia axillaris HOM05D000017 ORTHO05D001349 3.1e-09 65.1 57 52.6
Peaxi162Scf00322g00921 Petunia axillaris HOM05D000017 ORTHO05D009364 3.1e-09 65.1 57 47.4
Peaxi162Scf00528g00120 Petunia axillaris HOM05D000017 ORTHO05D009364 3.1e-09 65.1 54 55.6
Peaxi162Scf00556g00017 Petunia axillaris HOM05D000017 ORTHO05D009364 3.1e-09 65.1 54 55.6
Peaxi162Scf00677g00218 Petunia axillaris HOM05D000017 ORTHO05D009364 3.1e-09 65.1 57 52.6
Peaxi162Scf01138g00017 Petunia axillaris HOM05D000017 ORTHO05D009364 3.1e-09 65.1 57 52.6
Nitab4.5_0010627g0020 Nicotiana tabacum HOM05D000017 ORTHO05D009364 7.0e-09 63.9 53 60.4
Peaxi162Scf00448g00049 Petunia axillaris HOM05D000017 ORTHO05D009364 9.2e-09 63.5 45 66.7
Peaxi162Scf00897g00039 Petunia axillaris HOM05D000017 ORTHO05D001349 9.2e-09 63.5 63 42.9
Peaxi162Scf00081g01815 Petunia axillaris HOM05D000017 ORTHO05D009364 1.2e-08 63.2 57 52.6
Peaxi162Scf00174g01017 Petunia axillaris HOM05D000017 ORTHO05D015725 1.2e-08 63.2 53 54.7
Peaxi162Scf00914g00523 Petunia axillaris HOM05D000017 ORTHO05D009364 1.2e-08 63.2 57 52.6
Peaxi162Scf00906g00226 Petunia axillaris HOM05D000017 ORTHO05D009364 1.6e-08 62.8 53 50.9
Peaxi162Scf00929g00712 Petunia axillaris HOM05D000017 ORTHO05D001349 1.6e-08 62.8 57 45.6
Nitab4.5_0003726g0040 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.0e-08 62.4 44 63.6
Nitab4.5_0011159g0030 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.0e-08 62.4 60 48.3
Sopen10g011920 Solanum pennellii HOM05D000017 ORTHO05D001349 2.0e-08 62.4 48 58.3
Nitab4.5_0003938g0020 Nicotiana tabacum HOM05D000017 ORTHO05D015725 2.7e-08 62.0 57 56.1
Solyc05g150147.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 2.7e-08 62.0 51 54.9
Nitab4.5_0001544g0080 Nicotiana tabacum HOM05D000017 ORTHO05D009364 3.5e-08 61.6 67 47.8
Nitab4.5_0005741g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 3.5e-08 61.6 66 51.5
PGSC0003DMG400020379 Solanum tuberosum HOM05D000017 ORTHO05D009364 4.5e-08 61.2 52 51.9
Nitab4.5_0009005g0050 Nicotiana tabacum HOM05D000017 ORTHO05D009364 5.9e-08 60.8 51 56.9
Peaxi162Scf00005g00467 Petunia axillaris HOM05D000017 ORTHO05D009364 5.9e-08 60.8 57 52.6
Peaxi162Scf00375g00621 Petunia axillaris HOM05D000017 ORTHO05D001349 5.9e-08 60.8 68 45.6
PGSC0003DMG400017611 Solanum tuberosum HOM05D000017 ORTHO05D001349 7.8e-08 60.5 57 47.4
Peaxi162Scf00068g02417 Petunia axillaris HOM05D000017 ORTHO05D030244 1.0e-07 60.1 63 49.2
Peaxi162Scf00238g00713 Petunia axillaris HOM05D000017 ORTHO05D009364 1.0e-07 60.1 50 48.0
Peaxi162Scf00259g00038 Petunia axillaris HOM05D000017 ORTHO05D009364 1.0e-07 60.1 57 50.9
Nitab4.5_0003885g0050 Nicotiana tabacum HOM05D000017 ORTHO05D012383 1.3e-07 59.7 59 47.5
Nitab4.5_0006785g0050 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.3e-07 59.7 77 48.1
Nitab4.5_0010397g0030 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.3e-07 59.7 44 61.4
Peaxi162Scf00851g00031 Petunia axillaris HOM05D000017 ORTHO05D001349 1.3e-07 59.7 61 42.6
Nitab4.5_0006709g0030 Nicotiana tabacum HOM05D004715 ORTHO05D005644 1.7e-07 59.3 57 50.9
Peaxi162Scf00050g02422 Petunia axillaris HOM05D000017 ORTHO05D001349 2.3e-07 58.9 44 54.5
Peaxi162Scf00780g00017 Petunia axillaris HOM05D000017 ORTHO05D009364 2.3e-07 58.9 53 49.1
Peaxi162Scf00361g00712 Petunia axillaris HOM05D000017 ORTHO05D009364 2.9e-07 58.5 64 45.3
Peaxi162Scf00485g01217 Petunia axillaris HOM05D000017 ORTHO05D009364 3.9e-07 58.2 57 43.9
Nitab4.5_0011988g0020 Nicotiana tabacum HOM05D000017 ORTHO05D015725 5.0e-07 57.8 85 42.4
Peaxi162Scf00036g00318 Petunia axillaris HOM05D000017 ORTHO05D009364 5.0e-07 57.8 70 45.7
Peaxi162Scf00066g01917 Petunia axillaris HOM05D000017 ORTHO05D015725 5.0e-07 57.8 83 41.0
Nitab4.5_0002045g0070 Nicotiana tabacum HOM05D000017 ORTHO05D012383 8.6e-07 57.0 59 49.2
Solyc01g111480.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 1.1e-06 56.6 63 46.0
Solyc02g062435.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 1.1e-06 56.6 63 46.0
Solyc03g122210.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 1.1e-06 56.6 63 46.0
Solyc04g016085.1 Solanum lycopersicum HOM05D000017 ORTHO05D001349 1.1e-06 56.6 63 46.0
Solyc09g008110.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 1.1e-06 56.6 63 46.0
Sopen02g011340 Solanum pennellii HOM05D000017 ORTHO05D000013 1.1e-06 56.6 63 46.0
Sopen03g025320 Solanum pennellii HOM05D000017 ORTHO05D000013 1.1e-06 56.6 63 46.0
Sopen04g014920 Solanum pennellii HOM05D000017 ORTHO05D000013 1.1e-06 56.6 63 46.0
Sopen05g029250 Solanum pennellii HOM05D000017 ORTHO05D001349 1.1e-06 56.6 63 46.0
Sopen06g004260 Solanum pennellii HOM05D000017 ORTHO05D000013 1.1e-06 56.6 63 46.0
Sopen06g014550 Solanum pennellii HOM05D000017 ORTHO05D001349 1.1e-06 56.6 63 46.0
Sopen07g012470 Solanum pennellii HOM05D000017 ORTHO05D000013 1.1e-06 56.6 63 46.0
Sopen09g030880 Solanum pennellii HOM05D000017 ORTHO05D000013 1.1e-06 56.6 63 46.0
Nitab4.5_0000032g0070 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.5e-06 56.2 65 46.2
Nitab4.5_0000493g0120 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.9e-06 55.8 87 41.4
Nitab4.5_0001203g0030 Nicotiana tabacum HOM05D000017 ORTHO05D012383 1.9e-06 55.8 57 50.9
Peaxi162Scf00215g00034 Petunia axillaris HOM05D000017 ORTHO05D001349 1.9e-06 55.8 62 45.2
Solyc08g150149.1 Solanum lycopersicum HOM05D000017 ORTHO05D013101 1.9e-06 55.8 64 43.8
Solyc10g055423.1 Solanum lycopersicum HOM05D000017 ORTHO05D013101 1.9e-06 55.8 64 43.8
Sopen01g006400 Solanum pennellii HOM05D000017 ORTHO05D000013 1.9e-06 55.8 64 43.8
Sopen03g028620 Solanum pennellii HOM05D001851 ORTHO05D013101 1.9e-06 55.8 64 43.8
Sopen05g008290 Solanum pennellii HOM05D000002 ORTHO05D001349 1.9e-06 55.8 64 43.8
Sopen09g008710 Solanum pennellii HOM05D000006 ORTHO05D000001 1.9e-06 55.8 56 53.6
Nitab4.5_0000078g0300 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.5e-06 55.5 52 53.8
Nitab4.5_0000437g0220 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.5e-06 55.5 51 54.9
Nitab4.5_0000615g0130 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.5e-06 55.5 61 45.9
Sopen07g006850 Solanum pennellii HOM05D000017 ORTHO05D000013 2.5e-06 55.5 63 46.0
Sopen10g031980 Solanum pennellii HOM05D000017 ORTHO05D000013 2.5e-06 55.5 63 46.0
PGSC0003DMG400045289 Solanum tuberosum HOM05D000017 ORTHO05D013101 2.5e-06 55.5 57 49.1
Nitab4.5_0000052g0110 Nicotiana tabacum HOM05D000017 ORTHO05D001349 3.3e-06 55.1 34 79.4
Peaxi162Scf00133g00123 Petunia axillaris HOM05D000017 ORTHO05D009364 3.3e-06 55.1 53 47.2
Peaxi162Scf00228g00086 Petunia axillaris HOM05D000017 ORTHO05D015725 4.3e-06 54.7 53 52.8
Peaxi162Scf00562g00023 Petunia axillaris HOM05D000017 ORTHO05D009364 4.3e-06 54.7 53 50.9
Sopen03g017700 Solanum pennellii HOM05D000017 ORTHO05D001349 4.3e-06 54.7 63 47.6
Sopen07g029560 Solanum pennellii HOM05D000017 ORTHO05D013101 4.3e-06 54.7 64 42.2
Nitab4.5_0000020g0260 Nicotiana tabacum HOM05D000017 ORTHO05D009364 5.6e-06 54.3 29 89.7
Nitab4.5_0000100g0170 Nicotiana tabacum HOM05D000017 ORTHO05D009364 5.6e-06 54.3 29 86.2
Peaxi162Scf00147g00092 Petunia axillaris HOM05D000017 ORTHO05D001349 5.6e-06 54.3 51 47.1
Peaxi162Scf00001g04233 Petunia axillaris HOM05D000017 ORTHO05D001349 7.3e-06 53.9 62 40.3
Peaxi162Scf00131g00813 Petunia axillaris HOM05D000017 ORTHO05D001349 7.3e-06 53.9 64 46.9
Peaxi162Scf00235g00210 Petunia axillaris HOM05D000017 ORTHO05D009364 7.3e-06 53.9 53 47.2
Peaxi162Scf00290g00112 Petunia axillaris HOM05D000017 ORTHO05D001349 7.3e-06 53.9 62 43.5
Peaxi162Scf00365g00058 Petunia axillaris HOM05D000017 ORTHO05D001349 7.3e-06 53.9 64 46.9
Peaxi162Scf00406g00417 Petunia axillaris HOM05D000017 ORTHO05D009364 7.3e-06 53.9 50 56.0
Solyc12g150109.1 Solanum lycopersicum HOM05D000017 ORTHO05D013101 7.3e-06 53.9 65 43.1


User provided reference genes

Program Settings