Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000442g0180 Nicotiana tabacum HOM05D007233 ORTHO05D009043 1.3e-73 279.6 140 100.0
Peaxi162Scf00150g00710 Petunia axillaris HOM05D007233 ORTHO05D009043 6.6e-54 214.2 140 75.7
Solyc11g066690.2 Solanum lycopersicum HOM05D007233 ORTHO05D009043 3.3e-53 211.8 140 75.7
Sopen11g026420 Solanum pennellii HOM05D007233 ORTHO05D009043 3.3e-53 211.8 140 75.7
PGSC0003DMG400000464 Solanum tuberosum HOM05D007233 ORTHO05D009043 1.2e-52 209.9 140 75.0
CAN.G644.46 Capsicum annuum HOM05D007233 ORTHO05D009043 4.4e-50 201.4 140 72.9
GSVIVG01031420001 Vitis vinifera HOM05D007233 ORTHO05D009043 6.6e-46 187.6 140 68.6
Migut.N02527 Erythranthe guttata HOM05D007233 ORTHO05D009043 5.6e-45 184.5 142 69.0
Thecc.09G294400 Theobroma cacao HOM05D007233 ORTHO05D009043 2.8e-44 182.2 133 70.7
CSS0019792 Camellia sinensis var. sinensis HOM05D007233 ORTHO05D009043 4.7e-44 181.4 142 66.9
COL.COLO4_31139 Corchorus olitorius HOM05D007233 ORTHO05D009043 1.1e-43 180.3 133 69.2
MSTRG.17742 Avicennia marina HOM05D007233 ORTHO05D009043 1.8e-43 179.5 136 66.9
SalBow3G1176 Salvia bowleyana HOM05D007233 ORTHO05D009043 4.0e-43 178.3 143 65.7
Cc01_g10010 Coffea canephora HOM05D007233 ORTHO05D009043 5.2e-43 177.9 140 63.6
Sabra04G0127900 Salix brachista HOM05D007233 ORTHO05D009043 5.2e-43 177.9 133 69.9
Phvul.011G088600 Phaseolus vulgaris HOM05D007233 ORTHO05D009043 8.9e-43 177.2 133 66.9
Potri.004G190200 Populus trichocarpa HOM05D007233 ORTHO05D009043 8.9e-43 177.2 133 71.4
Gohir.D13G228300 Gossypium hirsutum HOM05D007233 ORTHO05D009043 1.5e-42 176.4 139 66.9
VMungo1127G1048 Vigna mungo HOM05D007233 ORTHO05D009043 2.0e-42 176.0 133 66.9
DCAR_015489 Daucus carota HOM05D007233 ORTHO05D009043 3.4e-42 175.3 140 62.9
Manes.04G010800 Manihot esculenta HOM05D007233 ORTHO05D009043 5.8e-42 174.5 133 69.2
Ca_10766_v3 Cicer arietinum L. HOM05D007233 ORTHO05D009043 7.6e-42 174.1 133 67.7
Lj3g0012043 Lotus japonicus HOM05D007233 ORTHO05D009043 1.3e-41 173.3 133 69.2
TAR369G0714 Trochodendron aralioides HOM05D007233 ORTHO05D009043 1.3e-41 173.3 140 65.7
EL10Ac9g21047 Beta vulgaris HOM05D007233 ORTHO05D009043 8.4e-41 170.6 137 63.5
Hund07722 Selenicereus undatus HOM05D007233 ORTHO05D009043 8.4e-41 170.6 135 64.4
QL01p014111 Quercus lobata HOM05D007233 ORTHO05D009043 1.4e-40 169.9 132 66.7
SGA_v2.0_scaffold93G28323 Striga asiatica HOM05D007233 ORTHO05D009043 2.4e-40 169.1 140 63.6
vmacro03232 Vaccinium macrocarpon HOM05D007233 ORTHO05D009043 7.1e-40 167.5 133 66.2
Lalb_Chr03g0027851 Lupinus albus HOM05D007233 ORTHO05D009043 9.3e-40 167.2 133 63.9
Lsat_1_v5_gn_1_61521 Lactuca sativa HOM05D007233 ORTHO05D009043 1.2e-39 166.8 133 63.9
Medtr4g056300 Medicago truncatula HOM05D007233 ORTHO05D009043 1.2e-39 166.8 134 67.9
TPR.G32017 Trifolium pratense HOM05D007233 ORTHO05D009043 1.6e-39 166.4 134 66.4
Rhsim13G0103700 Rhododendron simsii HOM05D007233 ORTHO05D009043 4.6e-39 164.9 133 63.9
unitig_699.g19183 Utricularia gibba HOM05D007233 ORTHO05D009043 6.0e-39 164.5 135 65.2
THA.LOC104826400 Tarenaya hassleriana HOM05D007233 ORTHO05D009043 7.8e-39 164.1 133 61.7
Aa31LG1G6480 Aethionema arabicum HOM05D007233 ORTHO05D009043 1.0e-38 163.7 135 60.0
HanXRQChr11g0345871 Helianthus annuus HOM05D007233 ORTHO05D009043 2.3e-38 162.5 139 59.7
Dinv29405 Davidia involucrata HOM05D007233 ORTHO05D009043 5.1e-38 161.4 174 56.3
Glyma.11G190700 Glycine max HOM05D007233 ORTHO05D009043 5.1e-38 161.4 138 60.1
Ciclev10030019m.g Citrus clementina HOM05D007233 ORTHO05D009043 8.7e-38 160.6 140 62.1
BcaB07g34087 Brassica carinata HOM05D007233 ORTHO05D009043 1.5e-37 159.8 133 60.2
C05p06530 Brassica napus HOM05D007233 ORTHO05D009043 1.5e-37 159.8 133 60.2
BolC5t29413H Brassica oleracea HOM05D007233 ORTHO05D009043 1.5e-37 159.8 133 60.2
A06p05410 Brassica napus HOM05D007233 ORTHO05D009043 2.5e-37 159.1 133 60.2
BraA06t23750Z Brassica rapa HOM05D007233 ORTHO05D009043 2.5e-37 159.1 133 60.2
CARHR008260 Cardamine hirsuta HOM05D007233 ORTHO05D009043 2.5e-37 159.1 135 58.5
Gohir.A13G223500 Gossypium hirsutum HOM05D007233 ORTHO05D009043 2.5e-37 159.1 133 64.7
Sp1g07040 Schrenkiella parvula HOM05D007233 ORTHO05D009043 5.6e-37 157.9 133 57.9
MELO3C004843.2 Cucumis melo HOM05D007233 ORTHO05D009043 7.3e-37 157.5 133 61.7
PGR119G2223 Punica granatum HOM05D007233 ORTHO05D009043 7.3e-37 157.5 133 62.4
ClCG01G013980 Citrullus lanatus HOM05D007233 ORTHO05D009043 9.6e-37 157.1 133 61.7
Aqoxy1G01014 Aquilegia oxysepala HOM05D007233 ORTHO05D009043 1.6e-36 156.4 136 57.4
SHI05395 Sapria himalayana HOM05D007233 ORTHO05D009043 1.6e-36 156.4 133 60.9
Duzib170G0414 Durio zibethinus HOM05D007233 ORTHO05D009043 2.1e-36 156.0 133 63.9
Haze_23494 Corylus avellana HOM05D007233 ORTHO05D009043 2.8e-36 155.6 135 62.2
CsaV3_1G014310 Cucumis sativus L. HOM05D007233 ORTHO05D009043 3.6e-36 155.2 139 59.7
ATR0665G357 Amborella trichopoda HOM05D007233 ORTHO05D009043 4.8e-36 154.8 133 61.7
AT1G08390 Arabidopsis thaliana HOM05D007233 ORTHO05D009043 4.8e-36 154.8 133 60.2
AUR62031769 Chenopodium quinoa HOM05D007233 ORTHO05D009043 4.8e-36 154.8 147 59.2
AL1G18800 Arabidopsis lyrata HOM05D007233 ORTHO05D009043 1.4e-35 153.3 133 57.1
Carub.0001s0774 Capsella rubella HOM05D007233 ORTHO05D009043 1.8e-35 152.9 133 57.1
CiPaw.14G104900 Carya illinoinensis HOM05D007233 ORTHO05D009043 1.8e-35 152.9 136 61.0
ECA248G0451 Erigeron canadensis HOM05D007233 ORTHO05D009043 1.8e-35 152.9 140 55.7
Thhalv10009077m.g Eutrema salsugineum HOM05D007233 ORTHO05D009043 3.1e-35 152.1 133 57.9
Sed0016181 Sechium edule HOM05D007233 ORTHO05D009043 4.0e-35 151.8 133 60.2
FvH4_3g30010 Fragaria vesca HOM05D007233 ORTHO05D009043 1.2e-34 150.2 133 59.4
Prupe.6G116400 Prunus persica HOM05D007233 ORTHO05D009043 1.2e-34 150.2 133 62.4
Ah.01g016160 Amaranthus hybridus HOM05D007233 ORTHO05D009043 1.5e-34 149.8 144 55.6
FAN25G1956 Fragaria x ananassa HOM05D007233 ORTHO05D009043 2.6e-34 149.1 133 58.6
Eucgr.F03331 Eucalyptus grandis HOM05D007233 ORTHO05D009043 4.5e-34 148.3 140 58.6
arahy.Tifrunner.gnm1.ann1.5NF9YD Arachis hypogaea HOM05D007233 ORTHO05D009043 5.8e-34 147.9 160 55.0
FAN21G0394 Fragaria x ananassa HOM05D007233 ORTHO05D009043 1.7e-33 146.4 133 58.6
MD11G1153700 Malus domestica HOM05D007233 ORTHO05D009043 6.4e-33 144.4 133 59.4
CANSAT78G0435 Cannabis sativa HOM05D007233 ORTHO05D009043 5.4e-32 141.4 133 55.6
RcHm_v2.0_Chr5g0055931 Rosa chinensis HOM05D007233 ORTHO05D009043 7.1e-32 141.0 134 59.0
PSO063G0378 Papaver somniferum HOM05D007233 ORTHO05D009043 3.3e-29 132.1 140 52.9
PSO339G4613 Papaver somniferum HOM05D007233 ORTHO05D009043 7.4e-29 131.0 140 52.9
MBI04_g22192_MAGBIO Magnolia biondii HOM05D007233 ORTHO05D009043 2.8e-28 129.0 103 63.1
Psat0s3169g0040 Pisum sativum HOM05D007233 ORTHO05D009043 1.2e-26 123.6 102 61.8
Atru.chr3.3421 Acer truncatum HOM05D007233 ORTHO05D009043 2.6e-26 122.5 92 65.2
Gorai.013G259000 Gossypium raimondii HOM05D007233 ORTHO05D009043 1.1e-24 117.1 103 61.2
Pp3c26_4940 Physcomitrium patens HOM05D007233 ORTHO05D009043 1.9e-24 116.3 134 47.8
Pp3c26_4950 Physcomitrium patens HOM05D007233 ORTHO05D009043 1.9e-24 116.3 134 47.8
Os03g0684300 Oryza sativa ssp. japonica HOM05D007233 ORTHO05D009043 4.2e-24 115.2 140 47.9
TWI31G0123 Tripterygium wilfordii HOM05D007233 ORTHO05D009043 1.2e-23 113.6 124 53.2
Cpa.g.sc47.40 Carica papaya HOM05D007233 ORTHO05D009043 1.6e-23 113.2 104 59.6
ClCG08G000500 Citrullus lanatus HOM05D007233 ORTHO05D009043 1.1e-21 107.1 104 57.7
Zm00001eb053200 Zea mays HOM05D007233 ORTHO05D009043 1.5e-21 106.7 140 48.6
Nn6g35132 Nelumbo nucifera HOM05D007233 ORTHO05D009043 1.6e-20 103.2 86 57.0
Cfa010203 Carpinus fangiana HOM05D007233 ORTHO05D009043 2.8e-20 102.4 94 57.4
Cfa020420 Carpinus fangiana HOM05D007233 ORTHO05D009043 4.0e-19 98.6 93 53.8
Haze_23472 Corylus avellana HOM05D007233 ORTHO05D009043 2.0e-18 96.3 133 48.1
Mapoly0016s0182 Marchantia polymorpha HOM05D007233 ORTHO05D009043 2.6e-18 95.9 133 43.6
arahy.Tifrunner.gnm1.ann1.9UEW9D Arachis hypogaea HOM05D007233 ORTHO05D009043 4.5e-18 95.1 126 46.0
Sc12g0003860 Simmondsia chinensis HOM05D007233 ORTHO05D009043 7.6e-18 94.4 77 64.9
Haze_23491 Corylus avellana HOM05D007233 ORTHO05D009043 4.9e-17 91.7 92 53.3
Haze_23479 Corylus avellana HOM05D007233 ORTHO05D009043 3.2e-16 89.0 92 53.3
Oeu035529.3 Olea europaea HOM05D007233 ORTHO05D009043 1.6e-15 86.7 83 57.8
CDE02G1642 Ceratophyllum demersum HOM05D007233 ORTHO05D009043 8.7e-14 80.9 75 61.3
AagrBONN_evm.TU.Sc2ySwM_344.3909 Anthoceros agrestis HOM05D007233 ORTHO05D009043 1.5e-13 80.1 110 41.8
Oeu000616.2 Olea europaea HOM05D007233 ORTHO05D009043 2.0e-10 69.7 72 54.2
Duzib168G0428 Durio zibethinus HOM05D007233 ORTHO05D009043 3.8e-09 65.5 100 45.0
Haze_23488 Corylus avellana HOM05D007233 ORTHO05D009043 5.5e-08 61.6 75 49.3
Potri.002G256001 Populus trichocarpa HOM05D007233 ORTHO05D009043 1.0e-06 57.4 131 35.9
arahy.Tifrunner.gnm1.ann1.3ZRX2Z Arachis hypogaea HOM05D007233 ORTHO05D009043 3.0e-06 55.8 70 48.6


User provided reference genes

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