Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000441g0160 Nicotiana tabacum HOM05D005917 ORTHO05D007517 9.9e-289 996.1 516 100.0
Nitab4.5_0005699g0010 Nicotiana tabacum HOM05D005917 ORTHO05D007517 3.8e-272 941.0 520 93.7
PGSC0003DMG400006133 Solanum tuberosum HOM05D005917 ORTHO05D007517 4.6e-254 880.9 520 87.9
Sopen07g024410 Solanum pennellii HOM05D005917 ORTHO05D007517 1.5e-252 875.9 520 87.1
Solyc07g047980.3 Solanum lycopersicum HOM05D005917 ORTHO05D007517 1.4e-250 869.4 520 86.5
CAN.G854.3 Capsicum annuum HOM05D005917 ORTHO05D007517 2.8e-243 845.1 521 85.4
Peaxi162Scf00776g00033 Petunia axillaris HOM05D005917 ORTHO05D007517 2.5e-239 832.0 521 84.3
Hma1.2p1_0405F.1_g145810 Hydrangea macrophylla HOM05D005917 ORTHO05D007517 3.6e-206 721.8 521 73.9
Thecc.01G189700 Theobroma cacao HOM05D005917 ORTHO05D007517 2.7e-201 705.7 521 72.4
Cc02_g11180 Coffea canephora HOM05D005917 ORTHO05D007517 6.6e-200 701.0 536 71.6
Gorai.007G167200 Gossypium raimondii HOM05D005917 ORTHO05D007517 3.3e-199 698.7 520 71.5
CiPaw.04G195700 Carya illinoinensis HOM05D005917 ORTHO05D007517 4.3e-199 698.4 519 70.7
Gohir.A11G150200 Gossypium hirsutum HOM05D005917 ORTHO05D007517 1.2e-198 696.8 520 71.5
Lj1P791T65 Lonicera japonica HOM05D005917 ORTHO05D007517 1.6e-198 696.4 526 70.9
Duzib133G0758 Durio zibethinus HOM05D005917 ORTHO05D007517 2.1e-198 696.0 520 71.9
QL08p028769 Quercus lobata HOM05D005917 ORTHO05D007517 2.1e-198 696.0 522 72.2
Cfa014247 Carpinus fangiana HOM05D005917 ORTHO05D007517 1.0e-197 693.7 517 72.0
Lsat_1_v5_gn_7_96161 Lactuca sativa HOM05D005917 ORTHO05D007517 1.0e-197 693.7 527 71.2
Gohir.D11G156700 Gossypium hirsutum HOM05D005917 ORTHO05D007517 5.2e-197 691.4 521 71.0
Rhsim06G0173900 Rhododendron simsii HOM05D005917 ORTHO05D007517 9.8e-196 687.2 523 71.1
Haze_12696 Corylus avellana HOM05D005917 ORTHO05D007517 3.7e-195 685.3 511 73.2
Potri.002G222100 Populus trichocarpa HOM05D005917 ORTHO05D007517 5.4e-194 681.4 523 68.3
TWI36G1171 Tripterygium wilfordii HOM05D005917 ORTHO05D007517 4.6e-193 678.3 519 71.5
vmacro12107 Vaccinium macrocarpon HOM05D005917 ORTHO05D007517 4.6e-193 678.3 518 71.2
Sabra02G0169500 Salix brachista HOM05D005917 ORTHO05D007517 1.3e-192 676.8 523 68.5
Manes.13G063400 Manihot esculenta HOM05D005917 ORTHO05D007517 1.7e-192 676.4 524 70.6
Sc21g0000840 Simmondsia chinensis HOM05D005917 ORTHO05D007517 3.0e-192 675.6 517 69.2
COL.COLO4_33026 Corchorus olitorius HOM05D005917 ORTHO05D007517 5.0e-192 674.9 521 70.1
PGR042G1386 Punica granatum HOM05D005917 ORTHO05D007517 6.6e-192 674.5 513 70.0
ECA236G4414 Erigeron canadensis HOM05D005917 ORTHO05D007517 1.5e-191 673.3 529 69.0
DCAR_019712 Daucus carota HOM05D005917 ORTHO05D007517 1.9e-191 672.9 518 68.5
EL10Ac9g22738 Beta vulgaris HOM05D005917 ORTHO05D007517 1.6e-190 669.8 518 69.5
AUR62017525 Chenopodium quinoa HOM05D005917 ORTHO05D007517 3.6e-190 668.7 524 69.1
TWI18G0259 Tripterygium wilfordii HOM05D005917 ORTHO05D007517 3.6e-190 668.7 517 70.6
Cpa.g.sc136.15 Carica papaya HOM05D005917 ORTHO05D007517 1.5e-188 663.3 518 68.9
HanXRQChr04g0126661 Helianthus annuus HOM05D005917 ORTHO05D007517 9.8e-188 660.6 517 68.9
TAR624G1058 Trochodendron aralioides HOM05D005917 ORTHO05D007517 9.8e-188 660.6 531 66.7
Aqoxy1G02033 Aquilegia oxysepala HOM05D005917 ORTHO05D007517 1.7e-187 659.8 520 67.1
MSTRG.14928 Avicennia marina HOM05D005917 ORTHO05D007517 1.7e-187 659.8 535 66.5
SalBow2G0814 Salvia bowleyana HOM05D005917 ORTHO05D007517 4.9e-187 658.3 533 68.1
Potri.014G164200 Populus trichocarpa HOM05D005917 ORTHO05D007517 1.1e-186 657.1 524 67.2
Ah.14g082780 Amaranthus hybridus HOM05D005917 ORTHO05D007517 2.4e-186 656.0 516 68.4
Ciclev10014942m.g Citrus clementina HOM05D005917 ORTHO05D007517 2.4e-186 656.0 524 67.7
SalBow2G2149 Salvia bowleyana HOM05D005917 ORTHO05D007517 3.2e-186 655.6 529 67.9
ClCG02G002680 Citrullus lanatus HOM05D005917 ORTHO05D007517 5.4e-186 654.8 518 68.5
CsaV3_7G002690 Cucumis sativus L. HOM05D005917 ORTHO05D007517 1.0e-184 650.6 517 67.7
MBI16_g11554_MAGBIO Magnolia biondii HOM05D005917 ORTHO05D007517 1.0e-184 650.6 527 65.8
Nn1g08522 Nelumbo nucifera HOM05D005917 ORTHO05D007517 1.0e-184 650.6 528 66.9
AUR62015069 Chenopodium quinoa HOM05D005917 ORTHO05D007517 3.0e-184 649.0 471 72.0
Dinv07857 Davidia involucrata HOM05D005917 ORTHO05D007517 8.6e-184 647.5 518 69.1
Sed0016848 Sechium edule HOM05D005917 ORTHO05D007517 1.5e-183 646.7 518 67.4
SGA_v2.0_scaffold302G47853 Striga asiatica HOM05D005917 ORTHO05D000086 4.3e-183 645.2 527 66.4
Atru.chr6.3353 Acer truncatum HOM05D005917 ORTHO05D007517 1.6e-182 643.3 521 67.9
arahy.Tifrunner.gnm1.ann1.V8M1HU Arachis hypogaea HOM05D005917 ORTHO05D007517 2.8e-182 642.5 521 68.5
Lalb_Chr17g0349121 Lupinus albus HOM05D005917 ORTHO05D007517 4.0e-181 638.6 528 66.1
Eucgr.K00656 Eucalyptus grandis HOM05D005917 ORTHO05D007517 1.2e-180 637.1 520 67.5
MD09G1121500 Malus domestica HOM05D005917 ORTHO05D007517 1.5e-180 636.7 520 68.3
TPR.G15058 Trifolium pratense HOM05D005917 ORTHO05D007517 3.4e-180 635.6 521 67.0
THA.LOC104802624 Tarenaya hassleriana HOM05D005917 ORTHO05D007517 7.5e-180 634.4 519 65.7
Prupe.3G202200 Prunus persica HOM05D005917 ORTHO05D007517 1.3e-179 633.6 519 68.0
LjContig00081g0012334 Lotus japonicus HOM05D005917 ORTHO05D007517 6.4e-179 631.3 525 65.9
Oeu012341.1 Olea europaea HOM05D005917 ORTHO05D007517 6.4e-179 631.3 530 65.5
Aa31LG5G18370 Aethionema arabicum HOM05D005917 ORTHO05D007517 1.4e-178 630.2 518 64.5
MD17G1112500 Malus domestica HOM05D005917 ORTHO05D007517 1.4e-178 630.2 520 67.9
Ca_06463_v3 Cicer arietinum L. HOM05D005917 ORTHO05D007517 5.4e-178 628.2 522 66.5
arahy.Tifrunner.gnm1.ann1.410RPC Arachis hypogaea HOM05D005917 ORTHO05D007517 7.1e-178 627.9 514 68.1
Psat0s736g0080 Pisum sativum HOM05D005917 ORTHO05D007517 7.1e-178 627.9 525 66.7
PSO761G0708 Papaver somniferum HOM05D005917 ORTHO05D007517 2.7e-177 625.9 531 64.6
PSO700G0235 Papaver somniferum HOM05D005917 ORTHO05D007517 3.5e-177 625.5 534 65.0
Medtr5g097510 Medicago truncatula HOM05D005917 ORTHO05D007517 7.8e-177 624.4 524 66.2
Glyma.14G006700 Glycine max HOM05D005917 ORTHO05D007517 1.3e-176 623.6 526 65.4
SHI10119 Sapria himalayana HOM05D005917 ORTHO05D007517 1.9e-175 619.8 525 65.3
AL3G19160 Arabidopsis lyrata HOM05D005917 ORTHO05D007517 3.3e-175 619.0 511 65.8
Glyma.02G306400 Glycine max HOM05D005917 ORTHO05D007517 5.6e-175 618.2 531 65.2
Migut.M00025 Erythranthe guttata HOM05D005917 ORTHO05D007517 7.3e-175 617.8 526 65.0
VMungo0647G1382 Vigna mungo HOM05D005917 ORTHO05D007517 7.3e-175 617.8 529 65.2
Thhalv10022183m.g Eutrema salsugineum HOM05D005917 ORTHO05D007517 9.5e-175 617.5 512 65.2
Manes.12G062101 Manihot esculenta HOM05D005917 ORTHO05D007517 9.5e-175 617.5 520 65.6
FAN05G4769 Fragaria x ananassa HOM05D005917 ORTHO05D007517 1.6e-174 616.7 520 67.3
FvH4_6g41230 Fragaria vesca HOM05D005917 ORTHO05D007517 1.4e-173 613.6 521 66.4
FAN09G3123 Fragaria x ananassa HOM05D005917 ORTHO05D007517 1.4e-173 613.6 521 66.6
FAN14G0404 Fragaria x ananassa HOM05D005917 ORTHO05D007517 6.8e-173 611.3 521 66.4
Phvul.008G286200 Phaseolus vulgaris HOM05D005917 ORTHO05D007517 1.2e-172 610.5 528 64.8
CARHR082500 Cardamine hirsuta HOM05D005917 ORTHO05D007517 2.6e-172 609.4 510 65.5
AT3G07790 Arabidopsis thaliana HOM05D005917 ORTHO05D007517 2.2e-171 606.3 516 64.7
Carub.0003s0737 Capsella rubella HOM05D005917 ORTHO05D007517 1.1e-170 604.0 517 66.2
Sp3g06720 Schrenkiella parvula HOM05D005917 ORTHO05D007517 1.9e-170 603.2 510 63.5
RcHm_v2.0_Chr2g0156781 Rosa chinensis HOM05D005917 ORTHO05D007517 1.2e-169 600.5 520 65.6
HPP92_002896 Vanilla planifolia HOM05D005917 ORTHO05D007517 7.3e-167 591.3 538 61.5
unitig_747.g21169 Utricularia gibba HOM05D005917 ORTHO05D007517 1.1e-165 587.4 530 62.3
FAN02G4512 Fragaria x ananassa HOM05D005917 ORTHO05D007517 3.4e-164 582.4 515 63.7
CDE02G0007 Ceratophyllum demersum HOM05D005917 ORTHO05D007517 4.4e-164 582.0 516 61.4
BcaC09g47947 Brassica carinata HOM05D005917 ORTHO05D007517 5.8e-164 581.6 512 63.9
HPP92_002885 Vanilla planifolia HOM05D005917 ORTHO05D007517 5.8e-164 581.6 538 60.8
BraA01t04362Z Brassica rapa HOM05D005917 ORTHO05D007517 9.9e-164 580.9 517 66.0
TAR626G1403 Trochodendron aralioides HOM05D005917 ORTHO05D007517 3.8e-163 578.9 467 67.0
BolC1t05532H Brassica oleracea HOM05D005917 ORTHO05D007517 6.4e-163 578.2 514 63.6
C05p59510 Brassica napus HOM05D005917 ORTHO05D007517 2.7e-161 572.8 514 62.6
Actinidia09775 Actinidia chinensis HOM05D005917 ORTHO05D007517 4.6e-161 572.0 467 67.0
BcaC05g29571 Brassica carinata HOM05D005917 ORTHO05D007517 1.9e-159 566.6 515 61.6
BolC5t34607H Brassica oleracea HOM05D005917 ORTHO05D007517 1.6e-158 563.5 514 61.9
BraA05t22776Z Brassica rapa HOM05D005917 ORTHO05D007517 2.1e-158 563.1 513 62.2
A05p40430 Brassica napus HOM05D005917 ORTHO05D007517 4.8e-158 562.0 513 62.0
CSS0026358 Camellia sinensis var. sinensis HOM05D005917 ORTHO05D007517 6.2e-158 561.6 525 63.4
Os06g0502900 Oryza sativa ssp. japonica HOM05D005917 ORTHO05D007517 1.7e-147 526.9 534 56.7
Zm00001eb209420 Zea mays HOM05D005917 ORTHO05D007517 2.5e-135 486.5 530 54.3
Zm00001eb209430 Zea mays HOM05D005917 ORTHO05D007517 1.6e-134 483.8 530 54.3
Zm00001eb403830 Zea mays HOM05D005917 ORTHO05D007517 1.8e-133 480.3 527 54.1
SEGI_07273 Sequoiadendron giganteum HOM05D005917 ORTHO05D007517 2.4e-133 479.9 534 52.1
GSVIVG01030044001 Vitis vinifera HOM05D005917 ORTHO05D000188 5.0e-131 472.2 491 56.4
ATR0665G318 Amborella trichopoda HOM05D005917 ORTHO05D007517 4.8e-126 455.7 520 53.1
Mapoly0016s0028 Marchantia polymorpha HOM05D005917 ORTHO05D007517 4.5e-124 449.1 544 51.7
CDE09G1298 Ceratophyllum demersum HOM05D005917 ORTHO05D007517 1.5e-119 434.1 307 71.0
Manes.12G052600 Manihot esculenta HOM05D005917 ORTHO05D007517 5.7e-119 432.2 516 51.9
Pp3c5_28640 Physcomitrium patens HOM05D005917 ORTHO05D007517 6.3e-118 428.7 545 49.7
SMO347G0414 Selaginella moellendorffii HOM05D005917 ORTHO05D007517 1.4e-109 401.0 521 47.2
Migut.L01336 Erythranthe guttata HOM05D005917 ORTHO05D007517 5.2e-104 382.5 512 49.2
CBR_g39617 Chara braunii HOM05D005917 ORTHO05D007517 1.5e-90 337.8 581 39.9
MELO3C024210.2 Cucumis melo HOM05D005917 ORTHO05D007517 1.1e-85 321.6 294 60.9
HanXRQChr11g0328131 Helianthus annuus HOM05D005917 ORTHO05D007517 1.2e-65 255.0 285 51.2
AagrBONN_evm.TU.Sc2ySwM_344.1277 Anthoceros agrestis HOM05D005917 ORTHO05D007517 3.4e-55 220.3 343 42.6
Sed0013022 Sechium edule HOM05D005917 ORTHO05D007517 1.8e-48 198.0 201 58.7
TPR.G18819 Trifolium pratense HOM05D005917 ORTHO05D007517 4.2e-37 160.2 292 40.1
MCO15G396 Micromonas commoda HOM05D005917 ORTHO05D007517 1.9e-26 124.8 525 27.8
Cre11.g482050 Chlamydomonas reinhardtii HOM05D005917 ORTHO05D007517 9.0e-24 115.9 476 28.6
Prupe.3G225800 Prunus persica HOM05D005917 ORTHO05D007517 2.1e-20 104.8 102 59.8
CAN.G244.10 Capsicum annuum HOM05D000180 ORTHO05D000099 6.1e-20 103.2 59 79.7
FAN14G5926 Fragaria x ananassa HOM05D005917 ORTHO05D007517 2.3e-19 101.3 81 64.2
Manes.16G064350 Manihot esculenta HOM05D005917 ORTHO05D007517 1.5e-18 98.6 72 70.8
Nn6g32049 Nelumbo nucifera HOM05D005917 ORTHO05D007517 3.2e-13 80.9 63 63.5
FAN02G4549 Fragaria x ananassa HOM05D005917 ORTHO05D007517 6.1e-12 76.6 54 64.8
Cfa024500 Carpinus fangiana HOM05D005917 ORTHO05D007517 1.0e-11 75.9 185 34.1
Nn6g32048 Nelumbo nucifera HOM05D005917 ORTHO05D007517 3.3e-10 70.9 81 53.1


User provided reference genes

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