Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000441g0020 Nicotiana tabacum HOM05D003210 ORTHO05D000001 6.8e-63 246.5 208 100.0
Peaxi162Scf00776g00227 Petunia axillaris HOM05D003210 ORTHO05D000001 2.7e-51 208.0 207 90.8
PGSC0003DMG400006128 Solanum tuberosum HOM05D003210 ORTHO05D000001 1.5e-49 202.2 208 88.5
Sopen07g024250 Solanum pennellii HOM05D003210 ORTHO05D000001 3.3e-49 201.1 208 89.4
Solyc07g047820.3 Solanum lycopersicum HOM05D003210 ORTHO05D000001 4.4e-46 190.7 208 87.5
Dinv24763 Davidia involucrata HOM05D003210 ORTHO05D000001 6.6e-42 176.8 206 79.6
CSS0019582 Camellia sinensis var. sinensis HOM05D003210 ORTHO05D000001 3.7e-37 161.0 206 70.9
CSS0039883 Camellia sinensis var. sinensis HOM05D003210 ORTHO05D000001 3.7e-37 161.0 206 69.9
QL04p021900 Quercus lobata HOM05D003210 ORTHO05D000001 4.6e-35 154.1 206 74.8
CAN.G1397.6 Capsicum annuum HOM05D003210 ORTHO05D000001 1.3e-34 152.5 208 79.8
Nitab4.5_0011940g0010 Nicotiana tabacum HOM05D003210 ORTHO05D000001 1.3e-34 152.5 77 96.1
Cfa012658 Carpinus fangiana HOM05D003210 ORTHO05D000001 1.2e-32 146.0 204 72.1
Haze_07989 Corylus avellana HOM05D003210 ORTHO05D000001 1.4e-31 142.5 203 72.4
Cc04_g11530 Coffea canephora HOM05D003210 ORTHO05D000001 2.4e-31 141.7 205 71.2
MD09G1122300 Malus domestica HOM05D003210 ORTHO05D000001 2.4e-31 141.7 209 74.2
Prupe.3G201200 Prunus persica HOM05D003210 ORTHO05D000001 2.4e-31 141.7 208 40.9
PGR142G4479 Punica granatum HOM05D003210 ORTHO05D000001 6.8e-31 140.2 206 73.3
Rhsim06G0174500 Rhododendron simsii HOM05D003210 ORTHO05D000001 8.9e-31 139.8 206 72.3
MSTRG.6643 Avicennia marina HOM05D003210 ORTHO05D000001 1.2e-30 139.4 206 65.0
Atru.chr6.3361 Acer truncatum HOM05D003210 ORTHO05D000001 7.6e-30 136.7 206 64.1
MELO3C024111.2 Cucumis melo HOM05D003210 ORTHO05D000001 1.3e-29 136.0 206 68.4
CiPaw.12G072400 Carya illinoinensis HOM05D003210 ORTHO05D000001 2.2e-29 135.2 206 68.4
Sed0013166 Sechium edule HOM05D003210 ORTHO05D000001 1.1e-28 132.9 206 66.0
CsaV3_7G023730 Cucumis sativus L. HOM05D003210 ORTHO05D000001 3.5e-27 127.9 206 66.0
Ciclev10014182m.g Citrus clementina HOM05D003210 ORTHO05D000001 4.6e-27 127.5 204 58.8
Sc06g0009870 Simmondsia chinensis HOM05D003210 ORTHO05D000001 4.6e-27 127.5 205 36.1
TAR629G0622 Trochodendron aralioides HOM05D003210 ORTHO05D000001 4.6e-27 127.5 204 69.6
ClCG02G002730 Citrullus lanatus HOM05D003210 ORTHO05D000001 1.3e-26 125.9 205 61.5
Thecc.01G191200 Theobroma cacao HOM05D003210 ORTHO05D000001 2.3e-26 125.2 204 45.6
Dinv33235 Davidia involucrata HOM05D003210 ORTHO05D000001 5.1e-26 124.0 206 69.4
SalBow7G0399 Salvia bowleyana HOM05D003210 ORTHO05D000001 6.6e-26 123.6 206 64.6
Migut.M00034 Erythranthe guttata HOM05D003210 ORTHO05D000001 8.7e-26 123.2 192 70.3
CsaV3_7G021590 Cucumis sativus L. HOM05D003210 ORTHO05D000001 1.6e-24 119.0 205 59.5
FvH4_6g41080 Fragaria vesca HOM05D003210 ORTHO05D000001 4.7e-24 117.5 79 67.1
FAN14G2019 Fragaria x ananassa HOM05D003210 ORTHO05D000001 4.7e-24 117.5 79 67.1
DCAR_012908 Daucus carota HOM05D003210 ORTHO05D000001 6.2e-24 117.1 206 64.6
DCAR_012925 Daucus carota HOM05D003210 ORTHO05D000001 6.2e-24 117.1 206 64.6
THA.LOC104819041 Tarenaya hassleriana HOM05D003210 ORTHO05D000001 6.2e-24 117.1 205 47.3
RcHm_v2.0_Chr2g0156641 Rosa chinensis HOM05D003210 ORTHO05D000001 8.1e-24 116.7 79 67.1
MELO3C013188.2 Cucumis melo HOM05D003210 ORTHO05D000001 1.1e-23 116.3 205 60.0
FAN05G1838 Fragaria x ananassa HOM05D003210 ORTHO05D000001 1.1e-23 116.3 79 67.1
FAN02G2842 Fragaria x ananassa HOM05D003210 ORTHO05D000001 1.8e-23 115.5 77 68.8
Hma1.2p1_0133F.1_g061410 Hydrangea macrophylla HOM05D003210 ORTHO05D000001 3.1e-23 114.8 77 67.5
Hma1.2p1_0133F.1_g061420 Hydrangea macrophylla HOM05D003210 ORTHO05D000001 3.1e-23 114.8 77 67.5
FAN09G1124 Fragaria x ananassa HOM05D003210 ORTHO05D000001 9.0e-23 113.2 77 67.5
Hma1.2p1_1825F.1_g304380 Hydrangea macrophylla HOM05D003210 ORTHO05D000001 9.0e-23 113.2 77 66.2
vmacro12101 Vaccinium macrocarpon HOM05D003210 ORTHO05D000001 3.4e-22 111.3 205 65.4
MBI19_g25583_MAGBIO Magnolia biondii HOM05D003210 ORTHO05D000001 7.6e-22 110.2 206 68.4
Manes.12G061200 Manihot esculenta HOM05D003210 ORTHO05D000001 7.6e-22 110.2 80 66.2
GSVIVG01030055001 Vitis vinifera HOM05D003210 ORTHO05D000001 7.6e-22 110.2 79 64.6
SGA_v2.0_scaffold181G39678 Striga asiatica HOM05D003210 ORTHO05D000001 9.9e-22 109.8 206 57.8
Dinv24770 Davidia involucrata HOM05D003210 ORTHO05D000001 3.8e-21 107.8 185 53.0
Oeu040467.2 Olea europaea HOM05D003210 ORTHO05D000001 3.8e-21 107.8 79 64.6
Nn1g03235 Nelumbo nucifera HOM05D003210 ORTHO05D000001 1.4e-20 105.9 79 63.3
TWI18G1117 Tripterygium wilfordii HOM05D003210 ORTHO05D000001 5.4e-20 104.0 79 59.5
unitig_748.g8367 Utricularia gibba HOM05D003210 ORTHO05D000001 1.3e-18 99.4 79 55.7
COL.COLO4_08492 Corchorus olitorius HOM05D003210 ORTHO05D000001 3.0e-18 98.2 78 61.5
Eucgr.K00651 Eucalyptus grandis HOM05D003210 ORTHO05D000001 5.1e-18 97.4 79 54.4
SHI10143 Sapria himalayana HOM05D003210 ORTHO05D000001 8.7e-18 96.7 202 55.0
HanXRQChr03g0075201 Helianthus annuus HOM05D003210 ORTHO05D000001 7.3e-17 93.6 78 51.3
Lsat_1_v5_gn_9_104601 Lactuca sativa HOM05D003210 ORTHO05D000001 2.8e-16 91.7 75 54.7
PSO541G3269 Papaver somniferum HOM05D003210 ORTHO05D000001 1.4e-15 89.4 79 53.2
HanXRQChr13g0389381 Helianthus annuus HOM05D003210 ORTHO05D000001 5.3e-15 87.4 209 57.9
PSO675G6229 Papaver somniferum HOM05D003210 ORTHO05D000001 7.6e-14 83.6 79 50.6
Ah.15g091280 Amaranthus hybridus HOM05D003210 ORTHO05D000001 1.7e-13 82.4 205 56.6
AUR62017491 Chenopodium quinoa HOM05D003210 ORTHO05D000001 1.7e-13 82.4 78 47.4
AUR62015034 Chenopodium quinoa HOM05D003210 ORTHO05D000001 2.9e-13 81.6 80 47.5
HPP92_009567 Vanilla planifolia HOM05D003210 ORTHO05D000001 3.0e-10 71.6 77 48.1
ECA240G1833 Erigeron canadensis HOM05D003210 ORTHO05D000001 3.9e-10 71.2 51 60.8
ATR0712G112 Amborella trichopoda HOM05D003210 ORTHO05D000001 9.6e-09 66.6 79 40.5
CAN.G674.2 Capsicum annuum HOM05D003210 ORTHO05D000001 2.1e-08 65.5 178 38.2
PGSC0003DMG401028232 Solanum tuberosum HOM05D003210 ORTHO05D000001 8.1e-08 63.5 178 47.2
CDE02G0711 Ceratophyllum demersum HOM05D003210 ORTHO05D000001 1.8e-07 62.4 203 60.1
Nitab4.5_0002364g0030 Nicotiana tabacum HOM05D003210 ORTHO05D000001 1.8e-07 62.4 178 51.1
Sopen10g032390 Solanum pennellii HOM05D003210 ORTHO05D000001 1.8e-07 62.4 178 45.5
Nitab4.5_0000574g0030 Nicotiana tabacum HOM05D003210 ORTHO05D000001 3.1e-07 61.6 178 51.7
HanXRQChr13g0389361 Helianthus annuus HOM05D000003 ORTHO05D000007 9.0e-07 60.1 57 45.6
Solyc10g081880.3 Solanum lycopersicum HOM05D003210 ORTHO05D000001 9.0e-07 60.1 178 47.2
Eucgr.H02438 Eucalyptus grandis HOM05D003210 ORTHO05D000001 1.5e-06 59.3 177 63.3
Migut.H02282 Erythranthe guttata HOM05D003210 ORTHO05D000001 2.6e-06 58.5 170 47.6
SEGI_31076 Sequoiadendron giganteum HOM05D003210 ORTHO05D000001 2.6e-06 58.5 176 66.5
Manes.12G124600 Manihot esculenta HOM05D003210 ORTHO05D000001 3.4e-06 58.2 179 48.6
Gorai.008G093300 Gossypium raimondii HOM05D003210 ORTHO05D000001 7.6e-06 57.0 84 36.9
Peaxi162Scf00370g00062 Petunia axillaris HOM05D003210 ORTHO05D000001 7.6e-06 57.0 178 44.4


User provided reference genes

Program Settings