Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000440g0140 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.7e-35 151.4 71 100.0
Nitab4.5_0000024g0080 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.0e-26 122.9 74 78.4
Nitab4.5_0003082g0080 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.6e-26 120.2 79 73.4
Nitab4.5_0001128g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.1e-25 119.4 79 74.7
Nitab4.5_0010582g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.3e-25 116.7 74 74.3
Nitab4.5_0005139g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.2e-24 115.9 79 74.7
Nitab4.5_0000781g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.8e-24 114.8 79 72.2
Nitab4.5_0004695g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.7e-24 114.0 79 69.6
Nitab4.5_0002394g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.3e-23 111.7 79 69.6
Nitab4.5_0001199g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.1e-23 111.3 78 69.2
Nitab4.5_0008584g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.2e-23 110.5 78 65.4
Nitab4.5_0000188g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.8e-23 110.2 78 70.5
Nitab4.5_0007957g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.2e-22 109.4 77 70.1
Nitab4.5_0028686g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.2e-22 109.4 79 68.4
Nitab4.5_0001130g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.0e-22 108.6 77 67.5
Nitab4.5_0003690g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.4e-22 107.8 79 65.8
Nitab4.5_0000067g0100 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.8e-22 107.1 73 71.2
Lj5g0025673 Lotus japonicus HOM05D001309 ORTHO05D000385 1.3e-21 105.9 80 63.8
Nitab4.5_0007229g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.7e-21 104.4 76 67.1
Nitab4.5_0000577g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.4e-21 103.6 79 67.1
Nitab4.5_0001313g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.9e-20 102.1 66 75.8
Nitab4.5_0001481g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.9e-20 102.1 79 64.6
Nitab4.5_0000524g0110 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.2e-20 101.3 78 64.1
Lj4g0021808 Lotus japonicus HOM05D001309 ORTHO05D000385 4.1e-20 100.9 79 64.6
Nitab4.5_0000999g0130 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.1e-20 100.9 79 63.3
Nitab4.5_0003905g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.1e-20 100.9 78 65.4
Nitab4.5_0008994g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.4e-20 100.5 68 72.1
Glyma.03G071600 Glycine max HOM05D001309 ORTHO05D000385 4.6e-19 97.4 79 62.0
Nitab4.5_0000581g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.3e-18 95.1 49 85.7
Nitab4.5_0000769g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.3e-18 95.1 78 62.8
Nitab4.5_0008635g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.1e-18 94.0 50 84.0
Nitab4.5_0005861g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.6e-18 93.6 80 56.2
Nitab4.5_0008623g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.6e-18 93.6 78 62.8
Nitab4.5_0000804g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.5e-17 91.7 78 60.3
Nitab4.5_0002459g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.5e-17 91.7 70 65.7
Nitab4.5_0005765g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.3e-17 91.3 48 85.4
Nitab4.5_0000789g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.3e-17 90.9 73 64.4
Nitab4.5_0000423g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.6e-17 90.5 71 63.4
Nitab4.5_0003520g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.6e-17 90.5 71 63.4
Solyc04g150154.1 Solanum lycopersicum HOM05D001309 ORTHO05D000385 5.6e-17 90.5 71 63.4
Nitab4.5_0000318g0200 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.3e-17 90.1 50 78.0
Nitab4.5_0001645g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.3e-17 90.1 50 78.0
Nitab4.5_0002385g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.5e-17 89.7 50 78.0
Nitab4.5_0006078g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.5e-17 89.7 50 78.0
Nitab4.5_0000522g0140 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.1e-16 88.6 90 53.3
Nitab4.5_0001199g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.6e-16 87.8 88 56.8
Nitab4.5_0002496g0090 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.6e-16 87.8 50 76.0
Nitab4.5_0005558g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.6e-16 87.8 70 60.0
Nitab4.5_0004891g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.2e-16 87.0 79 55.7
Nitab4.5_0004353g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.1e-15 86.3 50 80.0
Nitab4.5_0003339g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.3e-15 85.1 75 56.0
Nitab4.5_0016483g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.9e-15 83.2 77 57.1
Nitab4.5_0003703g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.2e-14 82.8 66 63.6
PGSC0003DMG400046524 Solanum tuberosum HOM05D001309 ORTHO05D000385 1.2e-14 82.8 50 70.0
Peaxi162Scf00032g00919 Petunia axillaris HOM05D001309 ORTHO05D000385 1.5e-14 82.4 72 54.2
Nitab4.5_0004285g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.0e-14 82.0 62 66.1
Nitab4.5_0000039g0160 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.4e-14 80.9 51 70.6
Nitab4.5_0015781g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.4e-14 80.9 49 71.4
Nitab4.5_0004688g0080 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.7e-13 79.0 79 51.9
Peaxi162Scf00524g00007 Petunia axillaris HOM05D001309 ORTHO05D000385 1.7e-13 79.0 48 72.9
Nitab4.5_0000261g0180 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.7e-13 77.8 44 79.5
Nitab4.5_0026778g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.4e-12 73.9 77 53.2
Sopen04g025420 Solanum pennellii HOM05D001309 ORTHO05D000385 9.2e-12 73.2 65 58.5
Nitab4.5_0006526g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.2e-11 72.8 43 72.1
Nitab4.5_0001086g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.1e-11 72.0 40 82.5
Nitab4.5_0008724g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.8e-11 70.1 65 53.8
Nitab4.5_0002419g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.0e-10 69.7 77 50.6
Nitab4.5_0005502g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.3e-10 68.6 43 69.8
Nitab4.5_0008492g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.0e-10 68.2 66 56.1
Nitab4.5_0012715g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.0e-10 68.2 48 66.7
Nitab4.5_0003202g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.5e-09 65.9 50 60.0
Nitab4.5_0008766g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.6e-09 63.9 63 52.4
Nitab4.5_0010256g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.1e-08 62.0 37 75.7
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 1.1e-07 59.7 81 42.0
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 1.1e-07 59.7 79 40.5
Manes.07G023800 Manihot esculenta HOM05D001309 ORTHO05D005970 1.8e-07 58.9 79 39.2
TWI60G1041 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 8.9e-07 56.6 41 61.0
Nitab4.5_0000928g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.2e-06 56.2 36 72.2
Zm00001eb182790 Zea mays HOM05D008576 ORTHO05D000385 1.2e-06 56.2 88 35.2
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.5e-06 55.8 81 39.5
Dinv19412 Davidia involucrata HOM05D001309 ORTHO05D005970 1.5e-06 55.8 79 40.5
CiPaw.09G181600 Carya illinoinensis HOM05D001309 ORTHO05D000385 2.0e-06 55.5 83 36.1
CiPaw.16G058400 Carya illinoinensis HOM05D001309 ORTHO05D000385 2.0e-06 55.5 83 36.1
CiPaw.16G105200 Carya illinoinensis HOM05D001309 ORTHO05D000385 2.6e-06 55.1 83 36.1
AUR62040758 Chenopodium quinoa HOM05D006468 ORTHO05D006908 2.6e-06 55.1 49 53.1
COL.COLO4_24303 Corchorus olitorius HOM05D001309 ORTHO05D000385 5.8e-06 53.9 79 38.0
Zm00001eb234630 Zea mays HOM05D008576 ORTHO05D000385 5.8e-06 53.9 88 34.1
Zm00001eb029070 Zea mays HOM05D008576 ORTHO05D000385 7.6e-06 53.5 88 34.1
Zm00001eb092990 Zea mays HOM05D008576 ORTHO05D000385 7.6e-06 53.5 88 34.1
Zm00001eb093010 Zea mays HOM05D008576 ORTHO05D000385 7.6e-06 53.5 88 34.1
Zm00001eb184880 Zea mays HOM05D008576 ORTHO05D000385 7.6e-06 53.5 88 34.1
Zm00001eb190070 Zea mays HOM05D008576 ORTHO05D000385 7.6e-06 53.5 88 34.1
Zm00001eb333630 Zea mays HOM05D008576 ORTHO05D000385 7.6e-06 53.5 88 34.1
Zm00001eb384730 Zea mays HOM05D008576 ORTHO05D000385 7.6e-06 53.5 88 34.1
Zm00001eb390290 Zea mays HOM05D008576 ORTHO05D000385 7.6e-06 53.5 88 34.1
Zm00001eb425380 Zea mays HOM05D008576 ORTHO05D000385 7.6e-06 53.5 88 34.1
Zm00001eb438630 Zea mays HOM05D008576 ORTHO05D000385 7.6e-06 53.5 88 34.1
Zm00001eb439020 Zea mays HOM05D008576 ORTHO05D000385 7.6e-06 53.5 88 34.1


User provided reference genes

Program Settings