Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000438g0170 Nicotiana tabacum HOM05D006469 ORTHO05D008034 1.3e-38 162.5 79 100.0
Sopen03g006220 Solanum pennellii HOM05D006469 ORTHO05D008034 3.5e-20 101.3 92 62.0
PGSC0003DMG402022530 Solanum tuberosum HOM05D006469 ORTHO05D008034 1.7e-19 99.0 92 60.9
Solyc03g033470.3 Solanum lycopersicum HOM05D006469 ORTHO05D008034 6.6e-19 97.1 92 59.8
Peaxi162Scf00328g00828 Petunia axillaris HOM05D006469 ORTHO05D008034 8.7e-19 96.7 83 63.9
CAN.G1817.1 Capsicum annuum HOM05D006469 ORTHO05D008034 1.5e-18 95.9 91 59.3
Nitab4.5_0000864g0140 Nicotiana tabacum HOM05D006469 ORTHO05D008034 9.6e-18 93.2 100 55.0
Nitab4.5_0008011g0040 Nicotiana tabacum HOM05D006469 ORTHO05D008034 1.5e-15 85.9 114 47.4
Nitab4.5_0003548g0050 Nicotiana tabacum HOM05D006469 ORTHO05D008034 2.2e-14 82.0 55 70.9
COL.COLO4_22441 Corchorus olitorius HOM05D006469 ORTHO05D008034 2.9e-14 81.6 86 54.7
Prupe.7G169600 Prunus persica HOM05D006469 ORTHO05D008034 4.9e-14 80.9 70 60.0
A01p02720 Brassica napus HOM05D006469 ORTHO05D008034 8.4e-14 80.1 74 55.4
BraA01t00258Z Brassica rapa HOM05D006469 ORTHO05D008034 8.4e-14 80.1 74 55.4
Psat4g100640 Pisum sativum HOM05D006469 ORTHO05D008034 1.9e-13 79.0 88 48.9
TPR.G24083 Trifolium pratense HOM05D006469 ORTHO05D008034 1.9e-13 79.0 89 50.6
Ciclev10026134m.g Citrus clementina HOM05D006469 ORTHO05D008034 2.4e-13 78.6 86 50.0
Migut.L00699 Erythranthe guttata HOM05D006469 ORTHO05D008034 4.2e-13 77.8 93 46.2
Carub.0007s0423 Capsella rubella HOM05D006469 ORTHO05D008034 1.6e-12 75.9 74 56.8
Dinv33650 Davidia involucrata HOM05D006469 ORTHO05D008034 2.1e-12 75.5 91 49.5
AT4G35987 Arabidopsis thaliana HOM05D006469 ORTHO05D008034 2.7e-12 75.1 76 52.6
FvH4_1g11701 Fragaria vesca HOM05D006469 ORTHO05D008034 2.7e-12 75.1 72 54.2
Duzib147G1015 Durio zibethinus HOM05D006469 ORTHO05D008034 3.5e-12 74.7 80 53.8
Lalb_Chr05g0229831 Lupinus albus HOM05D006469 ORTHO05D008034 3.5e-12 74.7 77 53.2
Thecc.01G016800 Theobroma cacao HOM05D006469 ORTHO05D008034 3.5e-12 74.7 79 51.9
Actinidia17434 Actinidia chinensis HOM05D006469 ORTHO05D008034 4.6e-12 74.3 88 50.0
BcaNung00773 Brassica carinata HOM05D006469 ORTHO05D008034 4.6e-12 74.3 74 52.7
C01p03020 Brassica napus HOM05D006469 ORTHO05D008034 6.0e-12 73.9 76 50.0
Phvul.003G263600 Phaseolus vulgaris HOM05D006469 ORTHO05D008034 6.0e-12 73.9 81 53.1
Sp7g33770 Schrenkiella parvula HOM05D006469 ORTHO05D008034 6.0e-12 73.9 79 51.9
GSVIVG01018765001 Vitis vinifera HOM05D006469 ORTHO05D008034 7.9e-12 73.6 83 50.6
Lj4g0017154 Lotus japonicus HOM05D006469 ORTHO05D008034 1.0e-11 73.2 88 45.5
Thhalv10025786m.g Eutrema salsugineum HOM05D006469 ORTHO05D008034 1.3e-11 72.8 70 54.3
MD02G1130100 Malus domestica HOM05D006469 ORTHO05D008034 1.3e-11 72.8 79 49.4
Oeu005141.2 Olea europaea HOM05D006469 ORTHO05D008034 1.3e-11 72.8 93 46.2
RcHm_v2.0_Chr2g0099281 Rosa chinensis HOM05D006469 ORTHO05D008034 1.3e-11 72.8 75 52.0
FAN19G1692 Fragaria x ananassa HOM05D006469 ORTHO05D008034 1.8e-11 72.4 72 52.8
Cpa.g.sc6.265 Carica papaya HOM05D006469 ORTHO05D008034 2.3e-11 72.0 83 48.2
Medtr8g075480 Medicago truncatula HOM05D006469 ORTHO05D008034 2.3e-11 72.0 90 44.4
BolC1t00288H Brassica oleracea HOM05D006469 ORTHO05D008034 3.0e-11 71.6 76 47.4
Migut.L00672 Erythranthe guttata HOM05D006469 ORTHO05D008034 3.0e-11 71.6 92 42.4
Gohir.D03G008900 Gossypium hirsutum HOM05D006469 ORTHO05D008034 3.0e-11 71.6 81 49.4
Gorai.003G009100 Gossypium raimondii HOM05D006469 ORTHO05D008034 3.0e-11 71.6 81 49.4
SalBow5G1778 Salvia bowleyana HOM05D006469 ORTHO05D008034 6.7e-11 70.5 91 40.7
Gohir.A02G171200 Gossypium hirsutum HOM05D006469 ORTHO05D008034 1.1e-10 69.7 80 48.8
VMungo0251G1912 Vigna mungo HOM05D006469 ORTHO05D008034 1.5e-10 69.3 86 45.3
Lj4A220G94 Lonicera japonica HOM05D006469 ORTHO05D008034 1.9e-10 68.9 81 48.1
Glyma.02G047300 Glycine max HOM05D006469 ORTHO05D008034 2.5e-10 68.6 74 52.7
Manes.02G105600 Manihot esculenta HOM05D006469 ORTHO05D008034 5.6e-10 67.4 78 48.7
CARHR244380 Cardamine hirsuta HOM05D006469 ORTHO05D008034 1.6e-09 65.9 75 48.0
Haze_03751 Corylus avellana HOM05D006469 ORTHO05D008034 1.6e-09 65.9 95 40.0
MSTRG.3610 Avicennia marina HOM05D006469 ORTHO05D008034 2.1e-09 65.5 92 42.4
unitig_46.g18721 Utricularia gibba HOM05D006469 ORTHO05D008034 2.1e-09 65.5 89 43.8
FAN26G2561 Fragaria x ananassa HOM05D006469 ORTHO05D008034 4.8e-09 64.3 50 60.0
QL06p050655 Quercus lobata HOM05D006469 ORTHO05D008034 4.8e-09 64.3 96 41.7
QL06p050760 Quercus lobata HOM05D006469 ORTHO05D008034 4.8e-09 64.3 96 41.7
QL11p035074 Quercus lobata HOM05D006469 ORTHO05D008034 4.8e-09 64.3 95 42.1
Aa31LG6G12960 Aethionema arabicum HOM05D006469 ORTHO05D008034 6.2e-09 63.9 73 47.9
FAN23G0491 Fragaria x ananassa HOM05D000153 ORTHO05D000118 6.2e-09 63.9 50 60.0
Nn6g32040 Nelumbo nucifera HOM05D006469 ORTHO05D008034 8.1e-09 63.5 96 39.6
arahy.Tifrunner.gnm1.ann1.DLPQ3A Arachis hypogaea HOM05D006469 ORTHO05D008034 1.8e-08 62.4 96 40.6
SGA_v2.0_scaffold45G17085 Striga asiatica HOM05D006469 ORTHO05D008034 1.8e-08 62.4 90 38.9
Atru.chr3.815 Acer truncatum HOM05D006469 ORTHO05D008034 2.4e-08 62.0 77 48.1
DCAR_021507 Daucus carota HOM05D006469 ORTHO05D008034 2.4e-08 62.0 82 45.1
Potri.007G057000 Populus trichocarpa HOM05D006469 ORTHO05D008034 4.0e-08 61.2 83 41.0
C09p44210 Brassica napus HOM05D006469 ORTHO05D008034 5.3e-08 60.8 71 50.7
MELO3C007914.2 Cucumis melo HOM05D006469 ORTHO05D008034 9.0e-08 60.1 99 40.4
TAR376G0066 Trochodendron aralioides HOM05D006469 ORTHO05D008034 9.0e-08 60.1 91 42.9
arahy.Tifrunner.gnm1.ann1.S7P5W6 Arachis hypogaea HOM05D006469 ORTHO05D008034 1.2e-07 59.7 96 39.6
BcaC03g14989 Brassica carinata HOM05D006469 ORTHO05D008034 1.2e-07 59.7 71 50.7
TWI73G0981 Tripterygium wilfordii HOM05D006469 ORTHO05D008034 1.5e-07 59.3 73 43.8
CSS0000310 Camellia sinensis var. sinensis HOM05D006469 ORTHO05D008034 3.4e-07 58.2 76 46.1
CANSAT25G3476 Cannabis sativa HOM05D006469 ORTHO05D008034 4.5e-07 57.8 97 40.2
CDE02G4243 Ceratophyllum demersum HOM05D006469 ORTHO05D008034 4.5e-07 57.8 82 40.2
PGR102G1692 Punica granatum HOM05D006469 ORTHO05D008034 4.5e-07 57.8 91 39.6
C02p25250 Brassica napus HOM05D006469 ORTHO05D008034 7.6e-07 57.0 55 52.7
CANSAT25G3534 Cannabis sativa HOM05D006469 ORTHO05D008034 7.6e-07 57.0 89 38.2
Lsat_1_v5_gn_2_76041 Lactuca sativa HOM05D006469 ORTHO05D008034 9.9e-07 56.6 92 41.3
Sabra07G0048900 Salix brachista HOM05D006469 ORTHO05D008034 9.9e-07 56.6 86 39.5
CiPaw.07G059900 Carya illinoinensis HOM05D006469 ORTHO05D008034 1.7e-06 55.8 104 36.5
CSS0021178 Camellia sinensis var. sinensis HOM05D006469 ORTHO05D008034 2.2e-06 55.5 76 44.7
Sc07g0001050 Simmondsia chinensis HOM05D006469 ORTHO05D008034 3.8e-06 54.7 80 43.8
CsaV3_6G047220 Cucumis sativus L. HOM05D006469 ORTHO05D008034 6.4e-06 53.9 93 38.7


User provided reference genes

Program Settings