Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000435g0090 Nicotiana tabacum HOM05D005015 ORTHO05D005696 1.4e-87 326.2 168 100.0
Solyc00g500322.1 Solanum lycopersicum HOM05D005015 ORTHO05D005696 3.7e-43 178.7 98 95.9
Solyc00g500333.1 Solanum lycopersicum HOM05D005015 ORTHO05D005696 3.7e-43 178.7 98 95.9
Hma1.2p1_2181F.1_g316260 Hydrangea macrophylla HOM05D005015 ORTHO05D005696 1.8e-42 176.4 127 75.6
Hma1.2p1_2181F.1_g316275 Hydrangea macrophylla HOM05D005015 ORTHO05D005696 1.8e-42 176.4 127 75.6
Peaxi162Scf00379g00087 Petunia axillaris HOM05D005015 ORTHO05D005696 1.8e-42 176.4 98 94.9
CSS0020927 Camellia sinensis var. sinensis HOM05D005015 ORTHO05D005696 1.2e-41 173.7 128 73.4
LjContig00489g0021854 Lotus japonicus HOM05D005015 ORTHO05D005696 1.2e-41 173.7 98 92.9
CAN.G612.5 Capsicum annuum HOM05D005015 ORTHO05D005696 1.6e-41 173.3 98 91.8
CAN.G877.4 Capsicum annuum HOM05D005015 ORTHO05D005696 2.0e-41 172.9 98 92.9
Ah.10g027630 Amaranthus hybridus HOM05D005015 ORTHO05D005696 1.3e-40 170.2 100 88.0
Ah.10g027770 Amaranthus hybridus HOM05D005015 ORTHO05D005696 1.3e-40 170.2 100 88.0
PGR111G0021 Punica granatum HOM05D005015 ORTHO05D005696 3.8e-40 168.7 98 88.8
CAN.G1648.11 Capsicum annuum HOM05D000216 ORTHO05D005696 6.5e-40 167.9 98 90.8
Cpa.g.sc30.79 Carica papaya HOM05D005015 ORTHO05D005696 6.5e-40 167.9 98 88.8
Potri.013G137900 Populus trichocarpa HOM05D005015 ORTHO05D005696 8.5e-40 167.5 98 88.8
CAN.G386.8 Capsicum annuum HOM05D000216 ORTHO05D001131 2.5e-39 166.0 130 70.0
Lsat_1_v5_gn_1_38680 Lactuca sativa HOM05D005015 ORTHO05D005696 7.2e-39 164.5 98 86.7
RcHm_v2.0_CPg0502451 Rosa chinensis HOM05D005015 ORTHO05D005696 2.7e-38 162.5 98 85.7
ATCG00130 Arabidopsis thaliana HOM05D005015 ORTHO05D005696 3.6e-38 162.2 98 84.7
Eucgr.H02991 Eucalyptus grandis HOM05D005015 ORTHO05D005696 3.6e-38 162.2 93 89.2
Sed0007367 Sechium edule HOM05D005015 ORTHO05D005696 3.6e-38 162.2 98 85.7
Sed0007878 Sechium edule HOM05D005015 ORTHO05D005696 3.6e-38 162.2 98 85.7
Sed0025514 Sechium edule HOM05D005015 ORTHO05D005696 3.6e-38 162.2 98 85.7
CARHR281880 Cardamine hirsuta HOM05D005015 ORTHO05D005696 6.1e-38 161.4 98 84.7
BNapus_Darmor_BZH_scaffold_253p00020 Brassica napus HOM05D005015 ORTHO05D005696 1.8e-37 159.8 98 83.7
BolSC29t60569H Brassica oleracea HOM05D005015 ORTHO05D005696 1.8e-37 159.8 98 83.7
BolSC37t60772H Brassica oleracea HOM05D005015 ORTHO05D005696 1.8e-37 159.8 98 83.7
BolSC45t60880H Brassica oleracea HOM05D005015 ORTHO05D005696 1.8e-37 159.8 98 83.7
BolSC46t60983H Brassica oleracea HOM05D005015 ORTHO05D005696 1.8e-37 159.8 98 83.7
BraSC140t45592Z Brassica rapa HOM05D005015 ORTHO05D005696 1.8e-37 159.8 98 83.7
BraSC140t45595Z Brassica rapa HOM05D005015 ORTHO05D005696 1.8e-37 159.8 98 83.7
BraSC179t45790Z Brassica rapa HOM05D005015 ORTHO05D005696 1.8e-37 159.8 98 83.7
Gohir.A05G314033 Gossypium hirsutum HOM05D005015 ORTHO05D005696 2.3e-37 159.5 98 85.7
Gohir.A11G101400 Gossypium hirsutum HOM05D005015 ORTHO05D005696 6.7e-37 157.9 98 84.7
Peaxi162Scf00211g00235 Petunia axillaris HOM05D000743 ORTHO05D005696 1.1e-36 157.1 89 92.1
Aa31csc39G190 Aethionema arabicum HOM05D005015 ORTHO05D005696 2.0e-36 156.4 98 82.7
BraSC25t45885Z Brassica rapa HOM05D005015 ORTHO05D005696 2.0e-36 156.4 96 83.3
Hund03959 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-36 156.4 98 83.7
Hund10285 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-36 156.4 98 83.7
Hund19316 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-36 156.4 98 83.7
Hund27454 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-36 156.4 98 83.7
Hund27640 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-36 156.4 98 83.7
Hund27652 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-36 156.4 98 83.7
Hund27672 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-36 156.4 98 83.7
Hund27697 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-36 156.4 98 83.7
Hund27742 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-36 156.4 98 83.7
Hund27807 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-36 156.4 98 83.7
Hund27824 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-36 156.4 98 83.7
Hund27931 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-36 156.4 98 83.7
Hund27946 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-36 156.4 98 83.7
Hund27994 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-36 156.4 98 83.7
Hund28016 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-36 156.4 98 83.7
Hund28060 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-36 156.4 98 83.7
Hund28129 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-36 156.4 98 83.7
Hund28142 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-36 156.4 98 83.7
Hund28151 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-36 156.4 98 83.7
Hund28161 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-36 156.4 98 83.7
Hund28177 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-36 156.4 98 83.7
Hund28187 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-36 156.4 98 83.7
Hund28210 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-36 156.4 98 83.7
Hund28258 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-36 156.4 98 83.7
Hund28390 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-36 156.4 98 83.7
Hund28502 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-36 156.4 98 83.7
Hund28650 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-36 156.4 98 83.7
Hund28906 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-36 156.4 98 83.7
Hund29887 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-36 156.4 98 83.7
Hund30205 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-36 156.4 98 83.7
Hund30312 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-36 156.4 98 83.7
Hund30436 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-36 156.4 98 83.7
Hund30552 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-36 156.4 98 83.7
Hund30554 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-36 156.4 98 83.7
Hund30665 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-36 156.4 98 83.7
Hund31017 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.0e-36 156.4 98 83.7
Nitab4.5_0027992g0020 Nicotiana tabacum HOM05D005015 ORTHO05D005696 3.3e-36 155.6 118 73.7
Glyma.12G231900 Glycine max HOM05D005015 ORTHO05D005696 1.3e-35 153.7 129 67.4
LjContig00318g0021444 Lotus japonicus HOM05D005015 ORTHO05D005696 1.3e-35 153.7 96 83.3
Lj2C1239T52 Lonicera japonica HOM05D005015 ORTHO05D005696 1.7e-35 153.3 98 82.7
Nitab4.5_0005637g0090 Nicotiana tabacum HOM05D005015 ORTHO05D005696 3.7e-35 152.1 88 90.9
BolSC45t60933H Brassica oleracea HOM05D005015 ORTHO05D005696 6.3e-35 151.4 99 80.8
Gorai.003G134800 Gossypium raimondii HOM05D005015 ORTHO05D005696 8.2e-35 151.0 107 75.7
EL10As12g24014 Beta vulgaris HOM05D000743 ORTHO05D000580 1.1e-34 150.6 91 86.8
BraSC58t46477Z Brassica rapa HOM05D005015 ORTHO05D005696 1.4e-34 150.2 92 82.6
Gohir.D03G128101 Gossypium hirsutum HOM05D005015 ORTHO05D005696 2.4e-34 149.4 107 74.8
DCAR_032470 Daucus carota HOM05D005015 ORTHO05D005696 9.1e-34 147.5 94 80.9
Duzib147G0859 Durio zibethinus HOM05D004473 ORTHO05D005696 1.2e-33 147.1 89 85.4
Lalb_Chr03g0042651 Lupinus albus HOM05D005015 ORTHO05D005696 1.6e-33 146.7 98 79.6
arahy.Tifrunner.gnm1.ann1.6U43FV Arachis hypogaea HOM05D005015 ORTHO05D005696 2.0e-33 146.4 88 86.4
TWI34G0268 Tripterygium wilfordii HOM05D005015 ORTHO05D005696 2.0e-33 146.4 97 80.4
arahy.Tifrunner.gnm1.ann1.VXR7WZ Arachis hypogaea HOM05D005015 ORTHO05D005696 7.7e-33 144.4 95 78.9
SabraPtG0000800 Salix brachista HOM05D000743 ORTHO05D000580 1.9e-31 139.8 86 83.7
Medtr0002s0540 Medicago truncatula HOM05D005015 ORTHO05D005696 2.7e-30 136.0 123 61.0
Gohir.A10G065880 Gossypium hirsutum HOM05D005015 ORTHO05D005696 8.0e-30 134.4 83 86.7
Medtr1g109420 Medicago truncatula HOM05D005015 ORTHO05D005696 3.0e-29 132.5 112 65.2
Psat0s2288g0080 Pisum sativum HOM05D000743 ORTHO05D000580 3.0e-29 132.5 87 79.3
arahy.Tifrunner.gnm1.ann1.XNS64L Arachis hypogaea HOM05D001387 ORTHO05D005696 8.8e-29 131.0 86 80.2
Psat0s2754g0200 Pisum sativum HOM05D000743 ORTHO05D000580 2.6e-28 129.4 87 77.0
Psat1g003840 Pisum sativum HOM05D000743 ORTHO05D000580 2.6e-28 129.4 87 77.0
Psat6g219360 Pisum sativum HOM05D000743 ORTHO05D000580 2.6e-28 129.4 87 77.0
arahy.Tifrunner.gnm1.ann1.MI951N Arachis hypogaea HOM05D005015 ORTHO05D005696 6.3e-27 124.8 98 67.3
Nitab4.5_0003481g0020 Nicotiana tabacum HOM05D009456 ORTHO05D011674 5.4e-26 121.7 61 96.7
Psat0s1586g0080 Pisum sativum HOM05D000743 ORTHO05D000580 5.4e-26 121.7 84 75.0
Lj1P433T25 Lonicera japonica HOM05D005015 ORTHO05D005696 3.5e-25 119.0 73 83.6
HanXRQChr10g0282491 Helianthus annuus HOM05D000743 ORTHO05D000580 4.5e-25 118.6 73 82.2
HanXRQChr00c0313g0573431 Helianthus annuus HOM05D000743 ORTHO05D000580 7.7e-25 117.9 71 83.1
HanXRQChr04g0120711 Helianthus annuus HOM05D000743 ORTHO05D000580 7.7e-25 117.9 71 83.1
HanXRQChr08g0210221 Helianthus annuus HOM05D000743 ORTHO05D000580 7.7e-25 117.9 71 83.1
HanXRQChr11g0326651 Helianthus annuus HOM05D000743 ORTHO05D000580 7.7e-25 117.9 71 83.1
HanXRQCPg0579841 Helianthus annuus HOM05D000743 ORTHO05D000580 7.7e-25 117.9 71 83.1
Gohir.A07G129651 Gossypium hirsutum HOM05D005015 ORTHO05D005696 1.3e-24 117.1 72 87.5
Nitab4.5_0000031g0130 Nicotiana tabacum HOM05D016373 ORTHO05D016276 1.7e-24 116.7 62 91.9
Nitab4.5_0001152g0120 Nicotiana tabacum HOM05D016373 ORTHO05D016276 2.5e-23 112.8 67 85.1
Nitab4.5_0008059g0010 Nicotiana tabacum HOM05D016373 ORTHO05D016276 4.2e-23 112.1 61 91.8
MELO3C000827.2 Cucumis melo HOM05D005015 ORTHO05D005696 3.6e-22 109.0 66 84.8
MELO3C027845.2 Cucumis melo HOM05D005015 ORTHO05D005696 3.6e-22 109.0 66 84.8
Gorai.002G106400 Gossypium raimondii HOM05D005015 ORTHO05D005696 2.3e-21 106.3 75 76.0
Dinv06683 Davidia involucrata HOM05D016373 ORTHO05D016276 3.0e-21 105.9 63 82.5
SEGI_04828 Sequoiadendron giganteum HOM05D005015 ORTHO05D005696 6.8e-21 104.8 98 59.2
SEGI_35208 Sequoiadendron giganteum HOM05D005015 ORTHO05D005696 6.8e-21 104.8 98 59.2
Oeu041254.1 Olea europaea HOM05D024339 ORTHO05D016276 1.2e-20 104.0 63 82.5
Gohir.D05G292450 Gossypium hirsutum HOM05D005015 ORTHO05D005696 1.3e-19 100.5 63 82.5
Gorai.009G308800 Gossypium raimondii HOM05D005015 ORTHO05D005696 1.3e-19 100.5 62 83.9
Oeu030614.1 Olea europaea HOM05D024339 ORTHO05D016276 2.2e-19 99.8 63 79.4
Peaxi162Scf00027g00003 Petunia axillaris HOM05D005015 ORTHO05D005696 2.2e-19 99.8 56 92.9
BolC2t10574H Brassica oleracea HOM05D005015 ORTHO05D005696 1.1e-18 97.4 61 82.0
MD08G1060700 Malus domestica HOM05D005015 ORTHO05D005696 1.8e-18 96.7 61 78.7
Nitab4.5_0000172g2010 Nicotiana tabacum HOM05D016373 ORTHO05D016276 2.4e-18 96.3 55 83.6
Migut.D01410 Erythranthe guttata HOM05D005015 ORTHO05D005696 4.1e-18 95.5 93 61.3
HanXRQChr00c0272g0573041 Helianthus annuus HOM05D005015 ORTHO05D005696 1.6e-17 93.6 69 69.6
A03p46590 Brassica napus HOM05D005015 ORTHO05D005696 4.5e-17 92.0 54 85.2
Gohir.A07G153850 Gossypium hirsutum HOM05D005015 ORTHO05D005696 1.0e-16 90.9 53 86.8
Sc09g0006540 Simmondsia chinensis HOM05D005573 ORTHO05D005696 1.0e-16 90.9 57 78.9
Medtr4g071050 Medicago truncatula HOM05D005015 ORTHO05D005696 1.1e-15 87.4 57 78.9
Solyc10g044535.1 Solanum lycopersicum HOM05D005015 ORTHO05D005696 1.9e-15 86.7 87 58.6
Gohir.A10G154675 Gossypium hirsutum HOM05D005015 ORTHO05D005696 1.2e-14 84.0 81 56.8
Solyc07g021380.1 Solanum lycopersicum HOM05D005015 ORTHO05D005696 2.8e-14 82.8 57 80.7
TPR.G15298 Trifolium pratense HOM05D005015 ORTHO05D005696 3.6e-14 82.4 82 54.9
Atru.chr7.976 Acer truncatum HOM05D005015 ORTHO05D005696 6.1e-14 81.6 50 80.0
Nn020s41497 Nelumbo nucifera HOM05D005015 ORTHO05D005696 5.2e-13 78.6 58 70.7
Gorai.011G122900 Gossypium raimondii HOM05D005015 ORTHO05D005696 6.8e-13 78.2 53 75.5
Solyc02g012020.3 Solanum lycopersicum HOM05D005015 ORTHO05D005696 2.6e-12 76.3 47 83.0
HanXRQChr04g0099301 Helianthus annuus HOM05D005015 ORTHO05D005696 4.4e-12 75.5 101 45.5
Lalb_Chr08g0232621 Lupinus albus HOM05D005015 ORTHO05D005696 1.7e-11 73.6 48 77.1
SEGI_03619 Sequoiadendron giganteum HOM05D000806 ORTHO05D002324 1.7e-11 73.6 64 64.1
SMO086G0010 Selaginella moellendorffii HOM05D005015 ORTHO05D005696 4.9e-11 72.0 89 48.3
SGA_v2.0_scaffold648G53338 Striga asiatica HOM05D003517 ORTHO05D009798 2.4e-10 69.7 120 40.0
Gohir.D06G126233 Gossypium hirsutum HOM05D005015 ORTHO05D005696 7.0e-10 68.2 38 86.8
Gorai.010G147200 Gossypium raimondii HOM05D005015 ORTHO05D005696 9.2e-10 67.8 68 55.9
Nn1g01955 Nelumbo nucifera HOM05D005015 ORTHO05D005696 2.7e-09 66.2 38 81.6
Nn2g15007 Nelumbo nucifera HOM05D005015 ORTHO05D005696 2.7e-09 66.2 38 81.6
BraSC143t45677Z Brassica rapa HOM05D005015 ORTHO05D005696 1.0e-08 64.3 44 72.7
EL10Ac5g12103 Beta vulgaris HOM05D005015 ORTHO05D005696 6.6e-08 61.6 48 68.8
HanXRQChr00c0300g0573221 Helianthus annuus HOM05D005015 ORTHO05D005696 1.5e-07 60.5 35 80.0
BolSC49t61201H Brassica oleracea HOM05D005015 ORTHO05D005696 2.5e-07 59.7 36 80.6
Lsat_1_v5_gn_3_117960 Lactuca sativa HOM05D005015 ORTHO05D005696 3.3e-07 59.3 43 69.8
Nitab4.5_0000172g1240 Nicotiana tabacum HOM05D009456 ORTHO05D283076 5.6e-07 58.5 33 81.8
Gohir.D10G206350 Gossypium hirsutum HOM05D005015 ORTHO05D005696 6.2e-06 55.1 53 62.3
Gorai.004G111300 Gossypium raimondii HOM05D000743 ORTHO05D000580 6.2e-06 55.1 40 72.5
Gorai.011G235400 Gossypium raimondii HOM05D005015 ORTHO05D005696 8.0e-06 54.7 34 76.5


User provided reference genes

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